RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	RPB11	P38902	120 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	SNU13	P39990	126 aa	Known RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	SCW4	P53334	386 aa	Known RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	IZH1	Q03419	316 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	SCW10	Q04951	389 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	SEI1	Q06058	285 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	SNT309	Q06091	175 aa	Predicted RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	ENB1	Q08299	606 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	YLR050C	Q12155	161 aa	Known RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	ISA2	Q12425	185 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	CSR2	Q12734	1121 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	YOR304C-A	O14468	76 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	OLE1	P21147	510 aa	Known RBP	4.79	□□□□□ -1.64
VTC2	YFL004W	AIM17	P23180	465 aa	Known RBP	4.79	□□□□□ -1.64
VTC2	YFL004W	RPI1	P23250	407 aa	Known RBP	4.79	□□□□□ -1.64
VTC2	YFL004W	ECM34	P38728	170 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	YER134C	P40081	178 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	YJL028W	P47062	111 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	MSY1	P48527	492 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	DUG3	P53871	357 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	YMR206W	Q03695	313 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	HEM13	P11353	328 aa	Known RBP	4.79	□□□□□ -1.64
VTC2	YFL004W	SCO1	P23833	295 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	YGL010W	P25338	174 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	FEN2	P25621	512 aa	Known RBP	4.79	□□□□□ -1.64
VTC2	YFL004W	OCH1	P31755	480 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	CDH1	P53197	566 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	PDR17	P53844	350 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	ELC1	Q03071	99 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	TRI1	Q05024	226 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	YPL162C	Q12042	273 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	YPR071W	Q12346	211 aa		4.79	□□□□□ -1.64
VTC2	YFL004W	RPS21B	Q3E754	87 aa	Known RBP	4.79	□□□□□ -1.64
VTC2	YFL004W	CBS1	P14066	229 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	DAD2	P36162	133 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	VBA2	P38358	474 aa	Known RBP	4.78	□□□□□ -1.64
VTC2	YFL004W	PRE5	P40302	234 aa	Known RBP	4.78	□□□□□ -1.64
VTC2	YFL004W	BUD8	P41698	603 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	XPT1	P47165	209 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	YGL235W	P53071	178 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	YGR035C	P53222	116 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	YNR040W	P53736	256 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	GIS1	Q03833	894 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	YDR286C	Q05530	114 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	ARR3	Q06598	404 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	YDL211C	Q12121	372 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	FRE8	Q12209	686 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	MCT1	Q12283	360 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	YDR262W	Q12331	272 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	COA2	Q3E823	68 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	DET1	Q99288	334 aa	Known RBP	4.78	□□□□□ -1.64
VTC2	YFL004W	AUR1	P36107	401 aa	Predicted RBP	4.78	□□□□□ -1.64
VTC2	YFL004W	IML3	P38265	245 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	GGC1	P38988	300 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	APQ12	P40532	138 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	HIT1	P46973	164 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	DAD3	P69850	94 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	COQ11	Q05892	277 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	STP3	Q05937	343 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	POS5	Q06892	414 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	BSC6	Q08280	497 aa		4.78	□□□□□ -1.64
VTC2	YFL004W	FMP49	A0A023PZB3	126 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	STE7	P06784	515 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	SAC7	P17121	654 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	FMO1	P38866	432 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	PRM5	P40476	318 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	XBP1	P40489	647 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	YIL067C	P40514	678 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	SNO3	P43544	222 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	ERG25	P53045	309 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	YGL230C	P53074	147 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	SNO2	P53823	222 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	YPR114W	Q06107	315 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	YPR064W	Q12492	139 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	SPO13	P23624	291 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	YCR025C	P25352	136 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	AHT1	P29589	182 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	PRE2	P30656	287 aa	Known RBP	4.77	□□□□□ -1.65
VTC2	YFL004W	MKK2	P32491	506 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	SPS18	P32572	300 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	AGA2	P32781	87 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	ICS2	P38284	255 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	YNL198C	P40166	100 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	YIL012W	P40551	113 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	SMK1	P41808	388 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	YJR015W	P47090	510 aa		4.77	□□□□□ -1.65
VTC2	YFL004W	RPL21A	Q02753	160 aa	Known RBP	4.77	□□□□□ -1.65
VTC2	YFL004W	RPL21B	Q12672	160 aa	Known RBP	4.77	□□□□□ -1.65
VTC2	YFL004W	PPA2	P28239	310 aa		4.76	□□□□□ -1.65
VTC2	YFL004W	ARO4	P32449	370 aa	Known RBP	4.76	□□□□□ -1.65
VTC2	YFL004W	MNS1	P32906	549 aa		4.76	□□□□□ -1.65
VTC2	YFL004W	BAT1	P38891	393 aa	Known RBP	4.76	□□□□□ -1.65
VTC2	YFL004W	TEM1	P38987	245 aa		4.76	□□□□□ -1.65
VTC2	YFL004W	YCR075W-A	Q3E830	75 aa		4.76	□□□□□ -1.65
VTC2	YFL004W	UBA3	Q99344	299 aa		4.76	□□□□□ -1.65
VTC2	YFL004W	YLR358C	O13565	187 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	SEC11	P15367	167 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	URK1	P27515	501 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	KKQ8	P36004	724 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	UME6	P39001	836 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms