RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W SME1Q12330 94 aaPredicted RBP0.55□□□□□ -2.32
YCK3YER123W YPL119C-AQ3E751 87 aa0.55□□□□□ -2.32
YCK3YER123W SGA1P08019 549 aa0.54□□□□□ -2.32
YCK3YER123W CCA1P21269 546 aa0.54□□□□□ -2.32
YCK3YER123W PRP18P33411 251 aaPredicted RBP0.54□□□□□ -2.32
YCK3YER123W BMH2P34730 273 aaKnown RBP0.54□□□□□ -2.32
YCK3YER123W CUE1P38428 203 aa0.54□□□□□ -2.32
YCK3YER123W YER135CP40082 130 aa0.54□□□□□ -2.32
YCK3YER123W DDI1P40087 428 aa0.54□□□□□ -2.32
YCK3YER123W SOK1P40317 901 aa0.54□□□□□ -2.32
YCK3YER123W ARC15P40518 154 aaRIP-Chip data0.54□□□□□ -2.32not detected
YCK3YER123W YIL001WP40560 513 aa0.54□□□□□ -2.32
YCK3YER123W ERG25P53045 309 aa0.54□□□□□ -2.32
YCK3YER123W KAP114P53067 1004 aa0.54□□□□□ -2.32
YCK3YER123W MPA43P53583 542 aaPredicted RBP0.54□□□□□ -2.32
YCK3YER123W CTF19Q02732 369 aa0.54□□□□□ -2.32
YCK3YER123W GOT1Q03554 138 aa0.54□□□□□ -2.32
YCK3YER123W ATG17Q06410 417 aa0.54□□□□□ -2.32
YCK3YER123W LCL2Q08045 131 aa0.54□□□□□ -2.32
YCK3YER123W BTS1Q12051 335 aa0.54□□□□□ -2.32
YCK3YER123W BBP1Q12365 385 aa0.54□□□□□ -2.32
YCK3YER123W COS2P0CX12 379 aa0.53□□□□□ -2.32
YCK3YER123W COS3P0CX13 379 aa0.53□□□□□ -2.32
YCK3YER123W PET9P18239 318 aaKnown RBP0.53□□□□□ -2.32
YCK3YER123W MDH2P22133 377 aa0.53□□□□□ -2.32
YCK3YER123W HSP150P32478 413 aa0.53□□□□□ -2.32
YCK3YER123W YKR045CP36138 183 aa0.53□□□□□ -2.32
YCK3YER123W FZO1P38297 855 aa0.53□□□□□ -2.32
YCK3YER123W CTR2P38865 189 aa0.53□□□□□ -2.32
YCK3YER123W AST2P39945 430 aaKnown RBP0.53□□□□□ -2.32
YCK3YER123W COA1P40452 197 aa0.53□□□□□ -2.32
YCK3YER123W MPP6P53725 186 aaPredicted RBP0.53□□□□□ -2.32
YCK3YER123W YMR279CQ03263 540 aa0.53□□□□□ -2.32
YCK3YER123W OST6Q03723 332 aa0.53□□□□□ -2.32
YCK3YER123W YLR179CQ06252 201 aaKnown RBP0.53□□□□□ -2.32
YCK3YER123W LOA1Q06508 300 aa0.53□□□□□ -2.32
YCK3YER123W ARV1Q06541 321 aa0.53□□□□□ -2.32
YCK3YER123W PRP11Q07350 266 aaPredicted RBP0.53□□□□□ -2.32
YCK3YER123W RRS1Q08746 203 aaKnown RBP0.53□□□□□ -2.32
YCK3YER123W SNU23Q12368 194 aaPredicted RBP0.53□□□□□ -2.32
YCK3YER123W SEY1Q99287 776 aa0.53□□□□□ -2.32
YCK3YER123W RAS2P01120 322 aaKnown RBP0.53□□□□□ -2.33
YCK3YER123W YHR212W-AP0CX91 67 aa0.53□□□□□ -2.33
YCK3YER123W FBA1P14540 359 aaKnown RBP0.53□□□□□ -2.33
YCK3YER123W SEC22P22214 214 aa0.53□□□□□ -2.33
YCK3YER123W RAD51P25454 400 aa0.53□□□□□ -2.33
YCK3YER123W ADE1P27616 306 aa0.53□□□□□ -2.33
YCK3YER123W QRI5P32344 111 aa0.53□□□□□ -2.33
YCK3YER123W SUI1P32911 108 aaKnown RBP0.53□□□□□ -2.33
YCK3YER123W FMP33P46998 180 aa0.53□□□□□ -2.33
YCK3YER123W SOL1P50278 321 aa0.53□□□□□ -2.33
YCK3YER123W YGR219WP53307 113 aa0.53□□□□□ -2.33
YCK3YER123W YNL247WP53852 767 aaKnown RBP0.53□□□□□ -2.33
YCK3YER123W YPR098CQ06089 161 aa0.53□□□□□ -2.33
YCK3YER123W YPL257WQ08974 193 aa0.53□□□□□ -2.33
YCK3YER123W YDL180WQ12301 547 aa0.53□□□□□ -2.33
YCK3YER123W YLR462WO13556 202 aa0.52□□□□□ -2.33
YCK3YER123W RPL9AP05738 191 aaKnown RBP0.52□□□□□ -2.33
YCK3YER123W YHR032W-AP0C5N6 59 aa0.52□□□□□ -2.33
YCK3YER123W NSP1P14907 823 aaKnown RBP0.52□□□□□ -2.33
YCK3YER123W DBP3P20447 523 aaKnown RBP0.52□□□□□ -2.33
YCK3YER123W PEX4P29340 183 aa0.52□□□□□ -2.33
YCK3YER123W MEI4P29467 408 aa0.52□□□□□ -2.33
YCK3YER123W JEN1P36035 616 aa0.52□□□□□ -2.33
YCK3YER123W YHR125WP38831 101 aa0.52□□□□□ -2.33
YCK3YER123W YHR127WP38833 243 aaKnown RBP0.52□□□□□ -2.33
YCK3YER123W DSE2P38844 325 aa0.52□□□□□ -2.33
YCK3YER123W PET100P38958 111 aa0.52□□□□□ -2.33
YCK3YER123W PRM10P42946 383 aa0.52□□□□□ -2.33
YCK3YER123W SNZ3P43545 298 aa0.52□□□□□ -2.33
YCK3YER123W YFR035CP43608 114 aa0.52□□□□□ -2.33
YCK3YER123W RPL9BP51401 191 aaKnown RBP0.52□□□□□ -2.33
YCK3YER123W RMR1P53060 241 aa0.52□□□□□ -2.33
YCK3YER123W YNR062CP53748 327 aa0.52□□□□□ -2.33
YCK3YER123W DIG2Q03373 323 aaKnown RBP0.52□□□□□ -2.33
YCK3YER123W LDB18Q07887 179 aa0.52□□□□□ -2.33
YCK3YER123W RRP40Q08285 240 aaKnown RBP0.52□□□□□ -2.33
YCK3YER123W SYC1Q08553 188 aaPredicted RBP0.52□□□□□ -2.33
YCK3YER123W Q0255P03881 472 aa0.51□□□□□ -2.33
YCK3YER123W RPL35AP0CX84 120 aaKnown RBP0.51□□□□□ -2.33
YCK3YER123W RPL35BP0CX85 120 aaKnown RBP0.51□□□□□ -2.33
YCK3YER123W APA2P22108 325 aa0.51□□□□□ -2.33
YCK3YER123W RNA15P25299 296 aaPredicted RBP0.51□□□□□ -2.33
YCK3YER123W ERG24P32462 438 aaKnown RBP0.51□□□□□ -2.33
YCK3YER123W SRL3P36167 246 aa0.51□□□□□ -2.33
YCK3YER123W PRS4P38063 326 aaPredicted RBP0.51□□□□□ -2.33
YCK3YER123W RIB1P38066 345 aa0.51□□□□□ -2.33
YCK3YER123W PRS2P38620 318 aaKnown RBP0.51□□□□□ -2.33
YCK3YER123W RTT105P40063 208 aa0.51□□□□□ -2.33
YCK3YER123W ALB1P47019 175 aaPredicted RBP0.51□□□□□ -2.33
YCK3YER123W ILM1P47155 203 aa0.51□□□□□ -2.33
YCK3YER123W SIP18P50263 79 aa0.51□□□□□ -2.33
YCK3YER123W USE1P53146 245 aa0.51□□□□□ -2.33
YCK3YER123W MRH4P53166 561 aa0.51□□□□□ -2.33
YCK3YER123W ERV29P53337 310 aa0.51□□□□□ -2.33
YCK3YER123W MRPL50P53724 139 aa0.51□□□□□ -2.33
YCK3YER123W YLR460CP54007 376 aa0.51□□□□□ -2.33
YCK3YER123W ERV25P54837 211 aaKnown RBP0.51□□□□□ -2.33
YCK3YER123W NUP49Q02199 472 aa0.51□□□□□ -2.33
YCK3YER123W COX20Q04935 205 aa0.51□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms