RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SNF4P12904 322 aa2.14□□□□□ -2.07
PRE1YER012W RPS5P26783 225 aaKnown RBP2.14□□□□□ -2.07
PRE1YER012W ATP7P30902 174 aa2.14□□□□□ -2.07
PRE1YER012W RAD23P32628 398 aaKnown RBP2.14□□□□□ -2.07
PRE1YER012W AGA2P32781 87 aa2.14□□□□□ -2.07
PRE1YER012W PPQ1P32945 549 aa2.14□□□□□ -2.07
PRE1YER012W NUF2P33895 451 aa2.14□□□□□ -2.07
PRE1YER012W ZRT3P34240 503 aa2.14□□□□□ -2.07
PRE1YER012W YBR241CP38142 488 aa2.14□□□□□ -2.07
PRE1YER012W FZO1P38297 855 aa2.14□□□□□ -2.07
PRE1YER012W LSM12P38828 187 aaKnown RBP2.14□□□□□ -2.07
PRE1YER012W CHL4P38907 458 aa2.14□□□□□ -2.07
PRE1YER012W YER121WP40076 114 aa2.14□□□□□ -2.07
PRE1YER012W SLM1P40485 686 aa2.14□□□□□ -2.07
PRE1YER012W GDS1P41913 522 aa2.14□□□□□ -2.07
PRE1YER012W SAY1P53324 424 aa2.14□□□□□ -2.07
PRE1YER012W YNL095CP53932 642 aa2.14□□□□□ -2.07
PRE1YER012W ERV25P54837 211 aaKnown RBP2.14□□□□□ -2.07
PRE1YER012W AIM36Q03798 255 aa2.14□□□□□ -2.07
PRE1YER012W ECM18Q04623 453 aa2.14□□□□□ -2.07
PRE1YER012W HEM25Q07534 307 aa2.14□□□□□ -2.07
PRE1YER012W YOR289WQ12012 251 aaPredicted RBP2.14□□□□□ -2.07
PRE1YER012W ADF1Q2V2Q1 113 aa2.14□□□□□ -2.07
PRE1YER012W YMR105W-AQ8TGS8 64 aa2.14□□□□□ -2.07
PRE1YER012W DPM1P14020 267 aaKnown RBP2.13□□□□□ -2.07
PRE1YER012W YAK1P14680 807 aa2.13□□□□□ -2.07
PRE1YER012W DEP1P31385 405 aa2.13□□□□□ -2.07
PRE1YER012W VMA5P31412 392 aaKnown RBP2.13□□□□□ -2.07
PRE1YER012W MRPL6P32904 214 aa2.13□□□□□ -2.07
PRE1YER012W PEX22P39718 180 aa2.13□□□□□ -2.07
PRE1YER012W AGP3P43548 558 aa2.13□□□□□ -2.07
PRE1YER012W YGL185CP53100 379 aa2.13□□□□□ -2.07
PRE1YER012W RVB1Q03940 463 aaKnown RBP2.13□□□□□ -2.07
PRE1YER012W SPC24Q04477 213 aa2.13□□□□□ -2.07
PRE1YER012W YDR115WQ04598 105 aa2.13□□□□□ -2.07
PRE1YER012W UIP4Q08926 304 aa2.13□□□□□ -2.07
PRE1YER012W APC2Q12440 853 aa2.13□□□□□ -2.07
PRE1YER012W YPR1Q12458 312 aa2.13□□□□□ -2.07
PRE1YER012W MRPL23Q12487 163 aaPredicted RBP2.13□□□□□ -2.07
PRE1YER012W RPS23AP0CX29 145 aaKnown RBP2.12□□□□□ -2.07
PRE1YER012W RPS23BP0CX30 145 aa2.12□□□□□ -2.07
PRE1YER012W MEK1P24719 497 aaPredicted RBP2.12□□□□□ -2.07
PRE1YER012W LDS1P31379 325 aa2.12□□□□□ -2.07
PRE1YER012W CLG1P35190 452 aa2.12□□□□□ -2.07
PRE1YER012W IPT1P38954 527 aa2.12□□□□□ -2.07
PRE1YER012W RMD6P39975 231 aa2.12□□□□□ -2.07
PRE1YER012W RRG9P40156 214 aa2.12□□□□□ -2.07
PRE1YER012W YRB2P40517 327 aa2.12□□□□□ -2.07
PRE1YER012W TIR3P40552 269 aa2.12□□□□□ -2.07
PRE1YER012W GON7P46984 123 aa2.12□□□□□ -2.07
PRE1YER012W LOH1P47055 219 aa2.12□□□□□ -2.07
PRE1YER012W YNL046WP53956 172 aa2.12□□□□□ -2.07
PRE1YER012W DIA1P54005 336 aa2.12□□□□□ -2.07
PRE1YER012W HHT1P61830 136 aa2.12□□□□□ -2.07
PRE1YER012W YPL080CQ02826 108 aa2.12□□□□□ -2.07
PRE1YER012W YMR166CQ03829 368 aa2.12□□□□□ -2.07
PRE1YER012W YDR391CQ04170 232 aa2.12□□□□□ -2.07
PRE1YER012W YPR098CQ06089 161 aa2.12□□□□□ -2.07
PRE1YER012W RRG8Q06109 277 aa2.12□□□□□ -2.07
PRE1YER012W ASR1Q06834 288 aa2.12□□□□□ -2.07
PRE1YER012W YPL225WQ08971 146 aaKnown RBP2.12□□□□□ -2.07
PRE1YER012W MPD1Q12404 318 aaKnown RBP2.12□□□□□ -2.07
PRE1YER012W DSF1P0CX08 502 aa2.11□□□□□ -2.07
PRE1YER012W YNR073CP0CX09 502 aa2.11□□□□□ -2.07
PRE1YER012W OAC1P32332 324 aa2.11□□□□□ -2.07
PRE1YER012W AST1P35183 429 aa2.11□□□□□ -2.07
PRE1YER012W MCH2P36032 473 aa2.11□□□□□ -2.07
PRE1YER012W RPS20P38701 121 aaKnown RBP2.11□□□□□ -2.07
PRE1YER012W LOC1P43586 204 aaPredicted RBP2.11□□□□□ -2.07
PRE1YER012W FIP1P45976 327 aa2.11□□□□□ -2.07
PRE1YER012W NSA1P53136 463 aaPredicted RBP2.11□□□□□ -2.07
PRE1YER012W YGL101WP53144 215 aa2.11□□□□□ -2.07
PRE1YER012W VOA1P53262 265 aa2.11□□□□□ -2.07
PRE1YER012W HCH1P53834 153 aa2.11□□□□□ -2.07
PRE1YER012W YMR252CQ04814 134 aa2.11□□□□□ -2.07
PRE1YER012W YMR226CQ05016 267 aaKnown RBP2.11□□□□□ -2.07
PRE1YER012W NNT1Q05874 261 aa2.11□□□□□ -2.07
PRE1YER012W PBP4Q07362 185 aaKnown RBP2.11□□□□□ -2.07
PRE1YER012W SYC1Q08553 188 aaPredicted RBP2.11□□□□□ -2.07
PRE1YER012W DCP1Q12517 231 aaPredicted RBP2.11□□□□□ -2.07
PRE1YER012W REP2P03872 296 aa2.1□□□□□ -2.07
PRE1YER012W SHE1P38200 338 aa2.1□□□□□ -2.07
PRE1YER012W RTT105P40063 208 aa2.1□□□□□ -2.07
PRE1YER012W YER188WP40103 239 aa2.1□□□□□ -2.07
PRE1YER012W CDC40P40968 455 aaPredicted RBP2.1□□□□□ -2.07
PRE1YER012W PIR5P46999 287 aa2.1□□□□□ -2.07
PRE1YER012W BUD25P85052 153 aa2.1□□□□□ -2.07
PRE1YER012W SPO19Q03029 223 aa2.1□□□□□ -2.07
PRE1YER012W MRX11Q03079 207 aa2.1□□□□□ -2.07
PRE1YER012W PRM15Q03262 622 aa2.1□□□□□ -2.07
PRE1YER012W VPS71Q03433 280 aa2.1□□□□□ -2.07
PRE1YER012W ATG38Q05789 226 aaKnown RBP2.1□□□□□ -2.07
PRE1YER012W YOL118CQ08259 102 aa2.1□□□□□ -2.07
PRE1YER012W FCY1Q12178 158 aa2.1□□□□□ -2.07
PRE1YER012W PST2Q12335 198 aaKnown RBP2.1□□□□□ -2.07
PRE1YER012W TPI1P00942 248 aaKnown RBP2.09□□□□□ -2.07
PRE1YER012W SAR1P20606 190 aaKnown RBP2.09□□□□□ -2.07
PRE1YER012W ACB1P31787 87 aa2.09□□□□□ -2.07
PRE1YER012W ZRT1P32804 376 aa2.09□□□□□ -2.07
PRE1YER012W RIB7P33312 244 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms