RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeast

Gene FCF1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FCF1	YDR339C	TDH2	P00358	332 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	RPL25	P04456	142 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	HAP2	P06774	265 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	PUT1	P09368	476 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	RNA15	P25299	296 aa	Predicted RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	POF1	P25576	258 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	SFK1	P35735	353 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	ATG8	P38182	117 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
FCF1	YDR339C	RPS20	P38701	121 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	RPL10	P41805	221 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	YJR085C	P47131	105 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	PAC10	P48363	199 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	DOC1	P53068	250 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	YNR062C	P53748	327 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	FMP41	P53889	259 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	YDR209C	Q03480	137 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	UTP15	Q04305	513 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	YMR315W	Q04869	349 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	RNH202	Q05635	350 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	YLR036C	Q07986	203 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	PLB3	Q08108	686 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	BRX1	Q08235	291 aa	Known RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	SCP1	Q08873	200 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	CSM4	Q08955	156 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	TIR4	Q12218	487 aa	Predicted RBP	3.18	□□□□□ -1.9
FCF1	YDR339C	YER078W-A	Q3E7A2	54 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	YCL001W-B	Q96VH2	84 aa		3.18	□□□□□ -1.9
FCF1	YDR339C	RIF1	P29539	1916 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	SEC59	P20048	519 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	PBN1	P25580	416 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	PPA2	P28239	310 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	PAU2	P32612	120 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	PRP18	P33411	251 aa	Predicted RBP	3.17	□□□□□ -1.9
FCF1	YDR339C	CAT5	P41735	233 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	MDM34	P53083	459 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	MRPS17	Q03246	237 aa	Predicted RBP	3.17	□□□□□ -1.9
FCF1	YDR339C	OST6	Q03723	332 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	ELP6	Q04868	273 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	PEX30	Q06169	523 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	KEI1	Q06346	221 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	MHR1	Q06630	226 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	CTR3	Q06686	241 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	YOR029W	Q12243	111 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	YPR011C	Q12251	326 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	IZH2	Q12442	317 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	COA6	Q3E846	104 aa		3.17	□□□□□ -1.9
FCF1	YDR339C	CDC28	P00546	298 aa	Known RBP	3.16	□□□□□ -1.9
FCF1	YDR339C	YOL163W	P0CF20	169 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	UBI4	P0CG63	381 aa	Known RBP	3.16	□□□□□ -1.9
FCF1	YDR339C	RPL40A	P0CH08	128 aa	Known RBP	3.16	□□□□□ -1.9
FCF1	YDR339C	RPL40B	P0CH09	128 aa	Known RBP	3.16	□□□□□ -1.9
FCF1	YDR339C	EPT1	P22140	391 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	CDC50	P25656	391 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	SCM4	P32564	187 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	MRPL15	P36523	253 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	POP8	P38208	133 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	YPC1	P38298	316 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	YPT31	P38555	223 aa	Known RBP	3.16	□□□□□ -1.9
FCF1	YDR339C	EMC5	P40540	141 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	EGT2	P42835	1041 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	BAT2	P47176	376 aa	Known RBP	3.16	□□□□□ -1.9
FCF1	YDR339C	YJR149W	P47177	404 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	NUP57	P48837	541 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	COG7	P53195	279 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	YGR015C	P53208	328 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	VHT1	P53241	593 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	CRH1	P53301	507 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	RSM27	P53305	110 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	SNO1	Q03144	224 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	FIT1	Q04433	528 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	YOR385W	Q08909	290 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	FDH1	Q08911	376 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	FCF2	Q12035	217 aa	Predicted RBP	3.16	□□□□□ -1.9
FCF1	YDR339C	SME1	Q12330	94 aa	Predicted RBP	3.16	□□□□□ -1.9
FCF1	YDR339C	UBR2	Q07963	1872 aa		3.16	□□□□□ -1.9
FCF1	YDR339C	ADH3	P07246	375 aa	Known RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	COX9	P07255	59 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	PRB1	P09232	635 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	RPS8A	P0CX39	200 aa	Known RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	RPS8B	P0CX40	200 aa	Known RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	RPB3	P16370	318 aa	Known RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	YPK2	P18961	677 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	SEC22	P22214	214 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	SPT4	P32914	102 aa	Predicted RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	CSE2	P33308	149 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	YKL187C	P34231	750 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	SOL2	P37262	315 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	SMB1	P40018	196 aa	Known RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	ICE2	P40499	491 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	VMA21	P41806	77 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	YJR012C	P47087	207 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	ADO1	P47143	340 aa	Known RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	YJR111C	P47148	283 aa	Known RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	YGL101W	P53144	215 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	PGA1	P53896	198 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	RNH201	P53942	307 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	YDC1	Q02896	317 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	RSM10	Q03201	203 aa		3.15	□□□□□ -1.91
FCF1	YDR339C	CUE4	Q04201	117 aa	Predicted RBP	3.15	□□□□□ -1.91
FCF1	YDR339C	GMC1	Q04399	608 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms