RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C YML108WQ03759 105 aa2.86□□□□□ -1.95
RTN1YDR233C GRX3Q03835 250 aa2.86□□□□□ -1.95
RTN1YDR233C SPG3Q04398 127 aaPredicted RBP2.86□□□□□ -1.95
RTN1YDR233C BNI1P41832 1953 aa2.85□□□□□ -1.95
RTN1YDR233C CDC36P06100 191 aaPredicted RBP2.85□□□□□ -1.95
RTN1YDR233C YKT6P36015 200 aaKnown RBP2.85□□□□□ -1.95
RTN1YDR233C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
RTN1YDR233C BEM2P39960 2167 aaKnown RBP2.85□□□□□ -1.95
RTN1YDR233C FBA1P14540 359 aaKnown RBP2.84□□□□□ -1.95
RTN1YDR233C PHO88P38264 188 aaPredicted RBP2.84□□□□□ -1.95
RTN1YDR233C BNA7Q04066 261 aa2.84□□□□□ -1.95
RTN1YDR233C YBT1P32386 1661 aa2.84□□□□□ -1.95
RTN1YDR233C DOP1Q03921 1698 aa2.84□□□□□ -1.95
RTN1YDR233C SEC4P07560 215 aaKnown RBP2.83□□□□□ -1.96
RTN1YDR233C PET191Q02772 108 aa2.83□□□□□ -1.96
RTN1YDR233C YIL177CP40434 1758 aa2.82□□□□□ -1.96
RTN1YDR233C YJL225CP40889 1758 aa2.82□□□□□ -1.96
RTN1YDR233C YLR156WP0CE96 114 aa2.82□□□□□ -1.96
RTN1YDR233C YLR159WP0CE97 114 aa2.82□□□□□ -1.96
RTN1YDR233C YLR161WP0CE98 114 aa2.82□□□□□ -1.96
RTN1YDR233C ATG22P25568 528 aa2.82□□□□□ -1.96
RTN1YDR233C ERV15P38312 142 aa2.82□□□□□ -1.96
RTN1YDR233C POP4P38336 279 aa2.82□□□□□ -1.96
RTN1YDR233C YNR062CP53748 327 aa2.82□□□□□ -1.96
RTN1YDR233C PDR17P53844 350 aa2.82□□□□□ -1.96
RTN1YDR233C GAS3Q03655 524 aa2.82□□□□□ -1.96
RTN1YDR233C TDA8Q6B2U8 126 aa2.82□□□□□ -1.96
RTN1YDR233C TUS1Q06412 1307 aa2.82□□□□□ -1.96
RTN1YDR233C DNF2Q12675 1612 aa2.82□□□□□ -1.96
RTN1YDR233C RFA3P26755 122 aaKnown RBP2.81□□□□□ -1.96
RTN1YDR233C MEI4P29467 408 aa2.81□□□□□ -1.96
RTN1YDR233C YAP3P38749 330 aa2.81□□□□□ -1.96
RTN1YDR233C YKE4P40544 346 aa2.81□□□□□ -1.96
RTN1YDR233C AIF1P52923 378 aa2.81□□□□□ -1.96
RTN1YDR233C CYT2Q00873 224 aa2.81□□□□□ -1.96
RTN1YDR233C USB1Q12208 290 aaKnown RBP2.81□□□□□ -1.96
RTN1YDR233C CHC1P22137 1653 aaKnown RBP2.81□□□□□ -1.96
RTN1YDR233C SEC17P32602 292 aa2.8□□□□□ -1.96
RTN1YDR233C AYR1P40471 297 aa2.8□□□□□ -1.96
RTN1YDR233C IRC18P47056 224 aa2.8□□□□□ -1.96
RTN1YDR233C DDI2P0CH63 225 aa2.79□□□□□ -1.96
RTN1YDR233C DDI3P0CH64 225 aa2.79□□□□□ -1.96
RTN1YDR233C GCN3P14741 305 aa2.79□□□□□ -1.96
RTN1YDR233C SPS18P32572 300 aa2.79□□□□□ -1.96
RTN1YDR233C UTP30P36144 274 aaKnown RBP2.79□□□□□ -1.96
RTN1YDR233C YHR022CP38763 256 aa2.79□□□□□ -1.96
RTN1YDR233C IKI1P38874 309 aa2.79□□□□□ -1.96
RTN1YDR233C RPL33BP41056 107 aaKnown RBP2.79□□□□□ -1.96
RTN1YDR233C YGR050CP53231 118 aa2.79□□□□□ -1.96
RTN1YDR233C CWC21Q03375 135 aaKnown RBP2.79□□□□□ -1.96
RTN1YDR233C ADF1Q2V2Q1 113 aa2.79□□□□□ -1.96
RTN1YDR233C YOR093CQ12275 1648 aa2.79□□□□□ -1.96
RTN1YDR233C CDC7P06243 507 aa2.78□□□□□ -1.96
RTN1YDR233C PET9P18239 318 aaKnown RBP2.78□□□□□ -1.96
RTN1YDR233C IDH1P28834 360 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
RTN1YDR233C MGM101P32787 269 aaKnown RBP2.78□□□□□ -1.96
RTN1YDR233C BMT5P40493 336 aa2.78□□□□□ -1.96
RTN1YDR233C MCP1Q12106 302 aa2.78□□□□□ -1.96
RTN1YDR233C YHR214C-EQ8TGK0 99 aa2.78□□□□□ -1.96
RTN1YDR233C IML1P47170 1584 aa2.78□□□□□ -1.96
RTN1YDR233C PDR5P33302 1511 aaKnown RBP2.78□□□□□ -1.97
RTN1YDR233C YCR087C-AP37263 153 aa2.77□□□□□ -1.97
RTN1YDR233C PGD1P40356 397 aa2.77□□□□□ -1.97
RTN1YDR233C CUS2P53830 285 aaPredicted RBP2.77□□□□□ -1.97
RTN1YDR233C SNZ1Q03148 297 aa2.77□□□□□ -1.97
RTN1YDR233C BOL1Q3E793 110 aa2.77□□□□□ -1.97
RTN1YDR233C YCL012CQ8J0M4 134 aa2.77□□□□□ -1.97
RTN1YDR233C VMR1P38735 1592 aa2.76□□□□□ -1.97
RTN1YDR233C JIP3O13555 125 aa2.76□□□□□ -1.97
RTN1YDR233C ERG25P53045 309 aa2.76□□□□□ -1.97
RTN1YDR233C SWP1Q02795 286 aa2.76□□□□□ -1.97
RTN1YDR233C HAP1P0CE41 1502 aa2.76□□□□□ -1.97
RTN1YDR233C HTB1P02293 131 aaKnown RBP2.75□□□□□ -1.97
RTN1YDR233C HTB2P02294 131 aa2.75□□□□□ -1.97
RTN1YDR233C MRPL28P36527 147 aa2.75□□□□□ -1.97
RTN1YDR233C ICE2P40499 491 aa2.75□□□□□ -1.97
RTN1YDR233C DOC1P53068 250 aa2.75□□□□□ -1.97
RTN1YDR233C BOL2P53082 120 aa2.75□□□□□ -1.97
RTN1YDR233C YPL162CQ12042 273 aa2.75□□□□□ -1.97
RTN1YDR233C NUP188P52593 1655 aaKnown RBP2.75□□□□□ -1.97
RTN1YDR233C DNF3Q12674 1656 aa2.75□□□□□ -1.97
RTN1YDR233C GCN2P15442 1659 aa2.74□□□□□ -1.97
RTN1YDR233C PTM1P32857 523 aa2.74□□□□□ -1.97
RTN1YDR233C MRPL17P36528 281 aa2.74□□□□□ -1.97
RTN1YDR233C SVP26P38869 228 aa2.74□□□□□ -1.97
RTN1YDR233C YRB2P40517 327 aa2.74□□□□□ -1.97
RTN1YDR233C BAT2P47176 376 aaKnown RBP2.74□□□□□ -1.97
RTN1YDR233C LSM7P53905 115 aaKnown RBP2.74□□□□□ -1.97
RTN1YDR233C YRA1Q12159 226 aaKnown RBP2.74□□□□□ -1.97
RTN1YDR233C PDR11P40550 1411 aa2.74□□□□□ -1.97
RTN1YDR233C RPL27BP0C2H7 136 aaKnown RBP2.73□□□□□ -1.97
RTN1YDR233C MER1P16523 270 aa2.73□□□□□ -1.97
RTN1YDR233C PEP8P40335 379 aa2.73□□□□□ -1.97
RTN1YDR233C RFC4P40339 323 aaKnown RBP2.73□□□□□ -1.97
RTN1YDR233C AGE2P40529 298 aa2.73□□□□□ -1.97
RTN1YDR233C TIR3P40552 269 aa2.73□□□□□ -1.97
RTN1YDR233C YDR249CQ03787 373 aa2.73□□□□□ -1.97
RTN1YDR233C YNG1Q08465 219 aa2.73□□□□□ -1.97
RTN1YDR233C SEC7P11075 2009 aaKnown RBP2.73□□□□□ -1.97
RTN1YDR233C MATALPHA2P0CY08 210 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms