RNA–Protein interactions for RNA: YDR022C

ATG31, Transcript of Autophagy-specific protein required for autophagosome formation, yeast

Gene ATG31, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG31	YDR022C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.27	□□□□□ -2.37	not detected
ATG31	YDR022C	ECM4	P36156	370 aa		0.27	□□□□□ -2.37
ATG31	YDR022C	YOL160W	Q08321	113 aa		0.27	□□□□□ -2.37
ATG31	YDR022C	YHR214C-E	Q8TGK0	99 aa		0.27	□□□□□ -2.37
ATG31	YDR022C	YFR032C-B	Q8TGU2	87 aa		0.27	□□□□□ -2.37
ATG31	YDR022C	RPL27A	P0C2H6	136 aa	Known RBP	0.26	□□□□□ -2.37
ATG31	YDR022C	YFH7	P43591	353 aa		0.26	□□□□□ -2.37
ATG31	YDR022C	RPC17	P47076	161 aa		0.26	□□□□□ -2.37
ATG31	YDR022C	MIC26	P50087	233 aa		0.26	□□□□□ -2.37
ATG31	YDR022C	YDR249C	Q03787	373 aa		0.26	□□□□□ -2.37
ATG31	YDR022C	YRA1	Q12159	226 aa	Known RBP	0.26	□□□□□ -2.37
ATG31	YDR022C	ATP15	P21306	62 aa		0.25	□□□□□ -2.37
ATG31	YDR022C	TCA17	P32613	152 aa		0.25	□□□□□ -2.37
ATG31	YDR022C	MGM101	P32787	269 aa	Known RBP	0.25	□□□□□ -2.37
ATG31	YDR022C	MIC12	P38341	106 aa		0.25	□□□□□ -2.37
ATG31	YDR022C	YER034W	P40022	185 aa	Known RBP	0.25	□□□□□ -2.37
ATG31	YDR022C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.25	□□□□□ -2.37	not detected
ATG31	YDR022C	RRN5	Q02983	363 aa		0.25	□□□□□ -2.37
ATG31	YDR022C	YLR283W	Q05867	314 aa		0.25	□□□□□ -2.37
ATG31	YDR022C	INO80	P53115	1489 aa		0.24	□□□□□ -2.37
ATG31	YDR022C	RPB3	P16370	318 aa	Known RBP	0.24	□□□□□ -2.37
ATG31	YDR022C	YMR31	P19955	123 aa		0.24	□□□□□ -2.37
ATG31	YDR022C	CKS1	P20486	150 aa	Known RBP	0.24	□□□□□ -2.37
ATG31	YDR022C	YGR050C	P53231	118 aa		0.24	□□□□□ -2.37
ATG31	YDR022C	YMR252C	Q04814	134 aa		0.24	□□□□□ -2.37
ATG31	YDR022C	THP2	O13539	261 aa	Known RBP	0.23	□□□□□ -2.37
ATG31	YDR022C	RPL25	P04456	142 aa	Known RBP	0.23	□□□□□ -2.37
ATG31	YDR022C	RHO1	P06780	209 aa	Known RBP	0.23	□□□□□ -2.37
ATG31	YDR022C	GCN3	P14741	305 aa		0.23	□□□□□ -2.37
ATG31	YDR022C	SPO13	P23624	291 aa		0.23	□□□□□ -2.37
ATG31	YDR022C	RPL24B	P24000	155 aa	Known RBP	0.23	□□□□□ -2.37
ATG31	YDR022C	VMA6	P32366	345 aa	Known RBP	0.23	□□□□□ -2.37
ATG31	YDR022C	DIG2	Q03373	323 aa	Known RBP	0.23	□□□□□ -2.37
ATG31	YDR022C	IKI3	Q06706	1349 aa	Known RBP	0.22	□□□□□ -2.37
ATG31	YDR022C	PRP8	P33334	2413 aa	Known RBP	0.22	□□□□□ -2.37
ATG31	YDR022C	POR1	P04840	283 aa	Known RBP	0.22	□□□□□ -2.37
ATG31	YDR022C	PPA2	P28239	310 aa		0.22	□□□□□ -2.37
ATG31	YDR022C	PRX1	P34227	261 aa	Known RBP	0.22	□□□□□ -2.37
ATG31	YDR022C	YEL008W	P40001	126 aa		0.22	□□□□□ -2.37
ATG31	YDR022C	GET1	P53192	235 aa		0.22	□□□□□ -2.37
ATG31	YDR022C	MPC3	P53311	146 aa		0.22	□□□□□ -2.37
ATG31	YDR022C	YLR460C	P54007	376 aa		0.22	□□□□□ -2.37
ATG31	YDR022C	LCL2	Q08045	131 aa		0.22	□□□□□ -2.37
ATG31	YDR022C	DGA1	Q08650	418 aa		0.22	□□□□□ -2.37
ATG31	YDR022C	JLP1	Q12358	412 aa		0.22	□□□□□ -2.37
ATG31	YDR022C	HPA3	P39979	161 aa		0.21	□□□□□ -2.38
ATG31	YDR022C	YEA4	P40004	342 aa		0.21	□□□□□ -2.38
ATG31	YDR022C	ADO1	P47143	340 aa	Known RBP	0.21	□□□□□ -2.38
ATG31	YDR022C	PDR17	P53844	350 aa		0.21	□□□□□ -2.38
ATG31	YDR022C	PET191	Q02772	108 aa		0.21	□□□□□ -2.38
ATG31	YDR022C	UPS3	Q04006	179 aa		0.21	□□□□□ -2.38
ATG31	YDR022C	HNT1	Q04344	158 aa	Known RBP	0.21	□□□□□ -2.38
ATG31	YDR022C	MDM32	Q12171	622 aa		0.21	□□□□□ -2.38
ATG31	YDR022C	ODC2	Q99297	307 aa		0.21	□□□□□ -2.38
ATG31	YDR022C	SEC4	P07560	215 aa	Known RBP	0.2	□□□□□ -2.38
ATG31	YDR022C	YBR121C-A	P0C5L4	52 aa		0.2	□□□□□ -2.38
ATG31	YDR022C	MAG1	P22134	296 aa	Known RBP	0.2	□□□□□ -2.38
ATG31	YDR022C	PAN3	P36102	679 aa	Predicted RBP	0.2	□□□□□ -2.38
ATG31	YDR022C	YHL018W	P38744	120 aa	Predicted RBP	0.2	□□□□□ -2.38
ATG31	YDR022C	LSM7	P53905	115 aa	Known RBP	0.2	□□□□□ -2.38
ATG31	YDR022C	COG5	P53951	403 aa		0.2	□□□□□ -2.38
ATG31	YDR022C	PRP11	Q07350	266 aa	Predicted RBP	0.2	□□□□□ -2.38
ATG31	YDR022C	IRC23	Q08416	157 aa		0.2	□□□□□ -2.38
ATG31	YDR022C	FIT2	Q08906	153 aa		0.2	□□□□□ -2.38
ATG31	YDR022C	COA3	Q3E7B2	85 aa		0.2	□□□□□ -2.38
ATG31	YDR022C	FMP49	A0A023PZB3	126 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	COX8	P04039	78 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	YCR090C	P25654	182 aa	Known RBP	0.19	□□□□□ -2.38
ATG31	YDR022C	UGX2	P32772	223 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	RPB7	P34087	171 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	TRM5	P38793	499 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	RTC3	P38804	111 aa	Predicted RBP	0.19	□□□□□ -2.38
ATG31	YDR022C	AIM2	P39721	246 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	HMF1	P40037	129 aa	Known RBP	0.19	□□□□□ -2.38
ATG31	YDR022C	YER085C	P40058	173 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	DAD4	P69851	72 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	YMR295C	Q03559	197 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	YMR226C	Q05016	267 aa	Known RBP	0.19	□□□□□ -2.38
ATG31	YDR022C	YPR013C	Q12145	317 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	SEY1	Q99287	776 aa		0.19	□□□□□ -2.38
ATG31	YDR022C	MER1	P16523	270 aa		0.18	□□□□□ -2.38
ATG31	YDR022C	AHT1	P29589	182 aa		0.18	□□□□□ -2.38
ATG31	YDR022C	YNL194C	P40169	301 aa		0.18	□□□□□ -2.38
ATG31	YDR022C	IRC18	P47056	224 aa		0.18	□□□□□ -2.38
ATG31	YDR022C	AIM25	P47140	327 aa		0.18	□□□□□ -2.38
ATG31	YDR022C	MET31	Q03081	177 aa		0.18	□□□□□ -2.38
ATG31	YDR022C	YMR099C	Q03161	297 aa	Known RBP	0.18	□□□□□ -2.38
ATG31	YDR022C	YNG1	Q08465	219 aa		0.18	□□□□□ -2.38
ATG31	YDR022C	YKL183C-A	Q3E765	70 aa		0.18	□□□□□ -2.38
ATG31	YDR022C	NHP6B	P11633	99 aa	Known RBP	0.17	□□□□□ -2.38
ATG31	YDR022C	OCH1	P31755	480 aa		0.17	□□□□□ -2.38
ATG31	YDR022C	SPS18	P32572	300 aa		0.17	□□□□□ -2.38
ATG31	YDR022C	CBT1	P36038	271 aa	Predicted RBP	0.17	□□□□□ -2.38
ATG31	YDR022C	MRPL15	P36523	253 aa		0.17	□□□□□ -2.38
ATG31	YDR022C	ERG28	P40030	148 aa		0.17	□□□□□ -2.38
ATG31	YDR022C	MGA1	P53050	456 aa		0.17	□□□□□ -2.38
ATG31	YDR022C	RNH202	Q05635	350 aa		0.17	□□□□□ -2.38
ATG31	YDR022C	STE18	P18852	110 aa		0.16	□□□□□ -2.38
ATG31	YDR022C	ARO7	P32178	256 aa		0.16	□□□□□ -2.38
ATG31	YDR022C	BMH2	P34730	273 aa	Known RBP	0.16	□□□□□ -2.38

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