RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W BET1P22804 142 aa1.78□□□□□ -2.12
UBC9YDL064W GAA1P39012 614 aa1.78□□□□□ -2.12
UBC9YDL064W RFC4P40339 323 aaKnown RBP1.78□□□□□ -2.12
UBC9YDL064W NOP19P53317 196 aaPredicted RBP1.78□□□□□ -2.12
UBC9YDL064W YDR274CP87283 123 aa1.78□□□□□ -2.12
UBC9YDL064W RPL25P04456 142 aaKnown RBP1.77□□□□□ -2.13
UBC9YDL064W URA5P13298 226 aaKnown RBP1.77□□□□□ -2.13
UBC9YDL064W YKR045CP36138 183 aa1.77□□□□□ -2.13
UBC9YDL064W TRM5P38793 499 aa1.77□□□□□ -2.13
UBC9YDL064W YLR162WQ06235 118 aa1.77□□□□□ -2.13
UBC9YDL064W GGA1Q06336 557 aa1.77□□□□□ -2.13
UBC9YDL064W GPM2Q12008 311 aa1.77□□□□□ -2.13
UBC9YDL064W FSF1Q12029 327 aaKnown RBP1.77□□□□□ -2.13
UBC9YDL064W MDM32Q12171 622 aa1.77□□□□□ -2.13
UBC9YDL064W YOL162WP0CF19 215 aa1.76□□□□□ -2.13
UBC9YDL064W SNC2P33328 115 aa1.76□□□□□ -2.13
UBC9YDL064W YMR226CQ05016 267 aaKnown RBP1.76□□□□□ -2.13
UBC9YDL064W QCR7P00128 127 aa1.75□□□□□ -2.13
UBC9YDL064W ABP140Q08641 628 aaKnown RBP1.75□□□□□ -2.13
UBC9YDL064W GET4Q12125 312 aa1.75□□□□□ -2.13
UBC9YDL064W RPL27AP0C2H6 136 aaKnown RBP1.74□□□□□ -2.13
UBC9YDL064W APA2P22108 325 aa1.74□□□□□ -2.13
UBC9YDL064W MAG1P22134 296 aaKnown RBP1.74□□□□□ -2.13
UBC9YDL064W ERG10P41338 398 aaKnown RBP1.74□□□□□ -2.13
UBC9YDL064W MRPS17Q03246 237 aaPredicted RBP1.74□□□□□ -2.13
UBC9YDL064W IKI3Q06706 1349 aaKnown RBP1.73□□□□□ -2.13
UBC9YDL064W JIP3O13555 125 aa1.73□□□□□ -2.13
UBC9YDL064W RPL2AP0CX45 254 aaKnown RBP1.73□□□□□ -2.13
UBC9YDL064W RPL2BP0CX46 254 aaKnown RBP1.73□□□□□ -2.13
UBC9YDL064W YGL010WP25338 174 aa1.73□□□□□ -2.13
UBC9YDL064W HMF1P40037 129 aaKnown RBP1.73□□□□□ -2.13
UBC9YDL064W CGR1P53188 120 aa1.73□□□□□ -2.13
UBC9YDL064W GET1P53192 235 aa1.73□□□□□ -2.13
UBC9YDL064W POP3P53833 195 aaPredicted RBP1.73□□□□□ -2.13
UBC9YDL064W ATG40Q99325 256 aa1.73□□□□□ -2.13
UBC9YDL064W MET5P47169 1442 aa1.73□□□□□ -2.13
UBC9YDL064W SIR2P06700 562 aa1.72□□□□□ -2.13
UBC9YDL064W MRS1P07266 363 aa1.72□□□□□ -2.13
UBC9YDL064W YBR220CP38318 560 aa1.72□□□□□ -2.13
UBC9YDL064W YBR285WP38354 144 aa1.72□□□□□ -2.13
UBC9YDL064W VMA22P38784 181 aa1.72□□□□□ -2.13
UBC9YDL064W KNH1P50112 268 aa1.72□□□□□ -2.13
UBC9YDL064W MMS2P53152 137 aa1.72□□□□□ -2.13
UBC9YDL064W YLR236CA0A023PZG4 107 aa1.71□□□□□ -2.14
UBC9YDL064W CKS1P20486 150 aaKnown RBP1.71□□□□□ -2.14
UBC9YDL064W ERJ5P43613 295 aaPredicted RBP1.71□□□□□ -2.14
UBC9YDL064W MPC3P53311 146 aa1.71□□□□□ -2.14
UBC9YDL064W SAY1P53324 424 aa1.71□□□□□ -2.14
UBC9YDL064W HNT1Q04344 158 aaKnown RBP1.71□□□□□ -2.14
UBC9YDL064W ANT1Q06497 328 aa1.71□□□□□ -2.14
UBC9YDL064W RAD9P14737 1309 aa1.7□□□□□ -2.14
UBC9YDL064W UPS2P35200 230 aa1.7□□□□□ -2.14
UBC9YDL064W OPY1P38271 328 aa1.7□□□□□ -2.14
UBC9YDL064W YBR209WP38311 105 aa1.7□□□□□ -2.14
UBC9YDL064W NUP49Q02199 472 aa1.7□□□□□ -2.14
UBC9YDL064W QCR8P08525 94 aa1.69□□□□□ -2.14
UBC9YDL064W CNB1P25296 175 aa1.69□□□□□ -2.14
UBC9YDL064W OCH1P31755 480 aa1.69□□□□□ -2.14
UBC9YDL064W KDX1P36005 433 aa1.69□□□□□ -2.14
UBC9YDL064W RPL13BP40212 199 aaKnown RBP1.69□□□□□ -2.14
UBC9YDL064W RPL13AQ12690 199 aaPredicted RBP1.69□□□□□ -2.14
UBC9YDL064W MBF1O14467 151 aaKnown RBP1.68□□□□□ -2.14
UBC9YDL064W POR1P04840 283 aaKnown RBP1.68□□□□□ -2.14
UBC9YDL064W YPK2P18961 677 aa1.68□□□□□ -2.14
UBC9YDL064W FPR1P20081 114 aaKnown RBP1.68□□□□□ -2.14
UBC9YDL064W ASF2P32448 525 aaPredicted RBP1.68□□□□□ -2.14
UBC9YDL064W TMA19P35691 167 aaKnown RBP1.68□□□□□ -2.14
UBC9YDL064W SHE2P36068 246 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
UBC9YDL064W ARP3P47117 449 aaKnown RBP1.68□□□□□ -2.14
UBC9YDL064W RAD28Q12021 506 aa1.68□□□□□ -2.14
UBC9YDL064W TFC1P32367 649 aa1.67□□□□□ -2.14
UBC9YDL064W YEA4P40004 342 aa1.67□□□□□ -2.14
UBC9YDL064W YJR111CP47148 283 aaKnown RBP1.67□□□□□ -2.14
UBC9YDL064W GPA2P10823 449 aa1.66□□□□□ -2.14
UBC9YDL064W SPO13P23624 291 aa1.66□□□□□ -2.14
UBC9YDL064W ADE1P27616 306 aa1.66□□□□□ -2.14
UBC9YDL064W PAN3P36102 679 aaPredicted RBP1.66□□□□□ -2.14
UBC9YDL064W ARO80Q04052 950 aa1.66□□□□□ -2.14
UBC9YDL064W YOL014WQ08110 124 aa1.66□□□□□ -2.14
UBC9YDL064W IGO2Q9P305 131 aa1.66□□□□□ -2.14
UBC9YDL064W SEC11P15367 167 aa1.65□□□□□ -2.15
UBC9YDL064W YCR090CP25654 182 aaKnown RBP1.65□□□□□ -2.15
UBC9YDL064W TVP23P38962 199 aa1.65□□□□□ -2.15
UBC9YDL064W SER2P42941 309 aa1.65□□□□□ -2.15
UBC9YDL064W YNL184CP53876 108 aa1.65□□□□□ -2.15
UBC9YDL064W YMR099CQ03161 297 aaKnown RBP1.65□□□□□ -2.15
UBC9YDL064W DGA1Q08650 418 aa1.65□□□□□ -2.15
UBC9YDL064W ODC2Q99297 307 aa1.65□□□□□ -2.15
UBC9YDL064W UBC12P52491 188 aa1.64□□□□□ -2.15
UBC9YDL064W ARO8P53090 500 aaKnown RBP1.64□□□□□ -2.15
UBC9YDL064W CUE4Q04201 117 aaPredicted RBP1.64□□□□□ -2.15
UBC9YDL064W RIO1Q12196 484 aaKnown RBP1.64□□□□□ -2.15
UBC9YDL064W CYR1P08678 2026 aaKnown RBP1.64□□□□□ -2.15
UBC9YDL064W SKI6P46948 246 aaPredicted RBP1.63□□□□□ -2.15
UBC9YDL064W FUS2Q05670 677 aa1.63□□□□□ -2.15
UBC9YDL064W UBR2Q07963 1872 aa1.63□□□□□ -2.15
UBC9YDL064W YER034WP40022 185 aaKnown RBP1.62□□□□□ -2.15
UBC9YDL064W YDL180WQ12301 547 aa1.62□□□□□ -2.15
UBC9YDL064W YML100W-AQ8TGT0 57 aa1.62□□□□□ -2.15
UBC9YDL064W MSB2P32334 1306 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms