RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C TDA8Q6B2U8 126 aa1.88□□□□□ -2.11
SRD1YCR018C CAT8P39113 1433 aa1.88□□□□□ -2.11
SRD1YCR018C MLP2P40457 1679 aa1.87□□□□□ -2.11
SRD1YCR018C TAF14P35189 244 aa1.87□□□□□ -2.11
SRD1YCR018C GRE3P38715 327 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
SRD1YCR018C TRM5P38793 499 aa1.87□□□□□ -2.11
SRD1YCR018C CTR2P38865 189 aa1.87□□□□□ -2.11
SRD1YCR018C RMD6P39975 231 aa1.87□□□□□ -2.11
SRD1YCR018C IRC22P40006 225 aa1.87□□□□□ -2.11
SRD1YCR018C YNL010WP53981 241 aaKnown RBP1.87□□□□□ -2.11
SRD1YCR018C CGI121Q03705 181 aaKnown RBP1.87□□□□□ -2.11
SRD1YCR018C MDM32Q12171 622 aa1.87□□□□□ -2.11
SRD1YCR018C GRX2P17695 143 aaKnown RBP1.86□□□□□ -2.11
SRD1YCR018C RFA3P26755 122 aaKnown RBP1.86□□□□□ -2.11
SRD1YCR018C SPS18P32572 300 aa1.86□□□□□ -2.11
SRD1YCR018C MRPL28P36527 147 aa1.86□□□□□ -2.11
SRD1YCR018C POP4P38336 279 aa1.86□□□□□ -2.11
SRD1YCR018C YAP3P38749 330 aa1.86□□□□□ -2.11
SRD1YCR018C AST2P39945 430 aaKnown RBP1.86□□□□□ -2.11
SRD1YCR018C GET1P53192 235 aa1.86□□□□□ -2.11
SRD1YCR018C GAS3Q03655 524 aa1.86□□□□□ -2.11
SRD1YCR018C NEJ1Q06148 342 aa1.86□□□□□ -2.11
SRD1YCR018C YOR093CQ12275 1648 aa1.86□□□□□ -2.11
SRD1YCR018C TUS1Q06412 1307 aa1.86□□□□□ -2.11
SRD1YCR018C RPL27AP0C2H6 136 aaKnown RBP1.85□□□□□ -2.11
SRD1YCR018C RPL27BP0C2H7 136 aaKnown RBP1.85□□□□□ -2.11
SRD1YCR018C YLR156WP0CE96 114 aa1.85□□□□□ -2.11
SRD1YCR018C YLR159WP0CE97 114 aa1.85□□□□□ -2.11
SRD1YCR018C YLR161WP0CE98 114 aa1.85□□□□□ -2.11
SRD1YCR018C MDH3P32419 343 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
SRD1YCR018C YCR087C-AP37263 153 aa1.85□□□□□ -2.11
SRD1YCR018C BMT5P40493 336 aa1.85□□□□□ -2.11
SRD1YCR018C MRPS8Q03799 155 aa1.85□□□□□ -2.11
SRD1YCR018C ARR2Q06597 130 aa1.85□□□□□ -2.11
SRD1YCR018C PSF1Q12488 208 aa1.85□□□□□ -2.11
SRD1YCR018C SRB8P25648 1427 aa1.84□□□□□ -2.11
SRD1YCR018C YBT1P32386 1661 aa1.84□□□□□ -2.11
SRD1YCR018C RPL25P04456 142 aaKnown RBP1.84□□□□□ -2.11
SRD1YCR018C FBA1P14540 359 aaKnown RBP1.84□□□□□ -2.11
SRD1YCR018C MRPS28P21771 286 aa1.84□□□□□ -2.11
SRD1YCR018C PTM1P32857 523 aa1.84□□□□□ -2.11
SRD1YCR018C ERV15P38312 142 aa1.84□□□□□ -2.11
SRD1YCR018C DAN1P47178 298 aa1.84□□□□□ -2.11
SRD1YCR018C IGO1P53897 168 aa1.84□□□□□ -2.11
SRD1YCR018C GIM3P53900 129 aa1.84□□□□□ -2.11
SRD1YCR018C ABP140Q08641 628 aaKnown RBP1.84□□□□□ -2.11
SRD1YCR018C YHR214C-EQ8TGK0 99 aa1.84□□□□□ -2.11
SRD1YCR018C CHC1P22137 1653 aaKnown RBP1.83□□□□□ -2.12
SRD1YCR018C PDR5P33302 1511 aaKnown RBP1.83□□□□□ -2.12
SRD1YCR018C REP2P03872 296 aa1.83□□□□□ -2.12
SRD1YCR018C MER1P16523 270 aa1.83□□□□□ -2.12
SRD1YCR018C PEX4P29340 183 aa1.83□□□□□ -2.12
SRD1YCR018C PGD1P40356 397 aa1.83□□□□□ -2.12
SRD1YCR018C AIF1P52923 378 aa1.83□□□□□ -2.12
SRD1YCR018C ERG25P53045 309 aa1.83□□□□□ -2.12
SRD1YCR018C DAD3P69850 94 aa1.83□□□□□ -2.12
SRD1YCR018C TRM12Q04235 462 aa1.83□□□□□ -2.12
SRD1YCR018C IKI3Q06706 1349 aaKnown RBP1.83□□□□□ -2.12
SRD1YCR018C DNF3Q12674 1656 aa1.83□□□□□ -2.12
SRD1YCR018C CDC7P06243 507 aa1.82□□□□□ -2.12
SRD1YCR018C TCA17P32613 152 aa1.82□□□□□ -2.12
SRD1YCR018C NRG2P38082 220 aa1.82□□□□□ -2.12
SRD1YCR018C PHO88P38264 188 aaPredicted RBP1.82□□□□□ -2.12
SRD1YCR018C YHR180WP38868 163 aa1.82□□□□□ -2.12
SRD1YCR018C YKE4P40544 346 aa1.82□□□□□ -2.12
SRD1YCR018C LSM7P53905 115 aaKnown RBP1.82□□□□□ -2.12
SRD1YCR018C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SRD1YCR018C YPL162CQ12042 273 aa1.82□□□□□ -2.12
SRD1YCR018C YHR086W-AQ3E746 53 aa1.82□□□□□ -2.12
SRD1YCR018C TSC3Q3E790 80 aa1.82□□□□□ -2.12
SRD1YCR018C RAD9P14737 1309 aa1.82□□□□□ -2.12
SRD1YCR018C PDR11P40550 1411 aa1.82□□□□□ -2.12
SRD1YCR018C VMR1P38735 1592 aa1.81□□□□□ -2.12
SRD1YCR018C JIP3O13555 125 aa1.81□□□□□ -2.12
SRD1YCR018C SEC4P07560 215 aaKnown RBP1.81□□□□□ -2.12
SRD1YCR018C KSS1P14681 368 aa1.81□□□□□ -2.12
SRD1YCR018C YPK2P18961 677 aa1.81□□□□□ -2.12
SRD1YCR018C SCL1P21243 252 aaKnown RBP1.81□□□□□ -2.12
SRD1YCR018C YRB2P40517 327 aa1.81□□□□□ -2.12
SRD1YCR018C RPL33BP41056 107 aaKnown RBP1.81□□□□□ -2.12
SRD1YCR018C YJL027CP47063 138 aaPredicted RBP1.81□□□□□ -2.12
SRD1YCR018C AIM25P47140 327 aa1.81□□□□□ -2.12
SRD1YCR018C MMS2P53152 137 aa1.81□□□□□ -2.12
SRD1YCR018C YGR050CP53231 118 aa1.81□□□□□ -2.12
SRD1YCR018C NOP19P53317 196 aaPredicted RBP1.81□□□□□ -2.12
SRD1YCR018C PET191Q02772 108 aa1.81□□□□□ -2.12
SRD1YCR018C IML1P47170 1584 aa1.81□□□□□ -2.12
SRD1YCR018C QCR7P00128 127 aa1.8□□□□□ -2.12
SRD1YCR018C MAG1P22134 296 aaKnown RBP1.8□□□□□ -2.12
SRD1YCR018C BET1P22804 142 aa1.8□□□□□ -2.12
SRD1YCR018C HMF1P40037 129 aaKnown RBP1.8□□□□□ -2.12
SRD1YCR018C PRM10P42946 383 aa1.8□□□□□ -2.12
SRD1YCR018C CYT2Q00873 224 aa1.8□□□□□ -2.12
SRD1YCR018C SWP1Q02795 286 aa1.8□□□□□ -2.12
SRD1YCR018C SPG3Q04398 127 aaPredicted RBP1.8□□□□□ -2.12
SRD1YCR018C YOL160WQ08321 113 aa1.8□□□□□ -2.12
SRD1YCR018C USB1Q12208 290 aaKnown RBP1.8□□□□□ -2.12
SRD1YCR018C YCL012CQ8J0M4 134 aa1.8□□□□□ -2.12
SRD1YCR018C KRE5P22023 1365 aa1.8□□□□□ -2.12
SRD1YCR018C TIM9O74700 87 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms