RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 PARP9Q8IXQ6 854 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 SYNPOQ8N3V7 929 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 CAMKK1Q8N5S9 505 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 FAM200AQ8TCP9 573 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 DEPDC1BQ8WUY9 529 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 SMARCD2Q92925 531 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 SCLT1Q96NL6 688 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 LRRC3BQ96PB8 259 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 PIGSQ96S52 555 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 TRAIPQ9BWF2 469 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 RSAD1Q9HA92 442 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 PIN4Q9Y237 131 aaKnown RBP7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 PCDHB9Q9Y5E1 797 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 PCDHB2Q9Y5E7 798 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 ADAMTS9Q9P2N4 1935 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 EVPLQ92817 2033 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 COL1A2P08123 1366 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 NF1P21359 2839 aa7.75□□□□□ -1.17
SCAMP1-206ENST00000618166 VWA8A3KMH1 1905 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 LRRK2Q5S007 2527 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 IGKV6D-21A0A0A0MT36 114 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 PLK4O00444 970 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 BACH1O14867 736 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 MOSPD3O75425 235 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 POU2F2P09086 479 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 HAND2P61296 217 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 SEMG2Q02383 582 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 ITGB3BPQ13352 177 aaPredicted RBP7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 NAIF1Q69YI7 327 aaPredicted RBP7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 EFCAB12Q6NXP0 572 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 C1orf229Q6ZS94 237 aaPredicted RBP7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 RALGPS2Q86X27 583 aaPredicted RBP7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 FAM9BQ8IZU0 186 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 LNX1Q8TBB1 728 aaPredicted RBP7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 ZSCAN18Q8TBC5 510 aaPredicted RBP7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 HASPINQ8TF76 798 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 RLN3Q8WXF3 142 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 RSPH1Q8WYR4 309 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 CHFRQ96EP1 664 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 MSANTD3Q96H12 275 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 CORO1BQ9BR76 489 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 MIOSQ9NXC5 875 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 APOBEC2Q9Y235 224 aaKnown RBP7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 UBIAD1Q9Y5Z9 338 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 CSMD1Q96PZ7 3565 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 NEDD4P46934 1319 aa7.74□□□□□ -1.17
SCAMP1-206ENST00000618166 ZFHX3Q15911 3703 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 DDX39AO00148 427 aaKnown RBP7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 CBFA2T3O75081 653 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 ZNF623O75123 536 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 ATG7O95352 703 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 APBB3O95704 486 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 EGFP01133 1207 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 ATXN1LP0C7T5 689 aaKnown RBP7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 ITPKAP23677 461 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 GPC1P35052 558 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 NFKB2Q00653 900 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 TLE3Q04726 772 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 DSC1Q08554 894 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 DRP2Q13474 957 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 HNRNPDQ14103 355 aaKnown RBP7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 HSP90AB4PQ58FF6 505 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 C1orf228Q6PIY5 440 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 SYT12Q8IV01 421 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 TBC1D10CQ8IV04 446 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 PIBF1Q8WXW3 757 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 CDHR1Q96JP9 859 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 KAT14Q9H8E8 782 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 FBRSL1Q9HCM7 1045 aaKnown RBP7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 EBF1Q9UH73 591 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 PCDH15Q96QU1 1955 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 USP9YO00507 2555 aaPredicted RBP7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 ITPR2Q14571 2701 aa7.73□□□□□ -1.17
SCAMP1-206ENST00000618166 ANTXRLA6NF34 631 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 KLRF2D3W0D1 207 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 MEIS2O14770 477 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 CHADO15335 359 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 SMARCA5O60264 1052 aaPredicted RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 GJB3O75712 270 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 ZFYP08048 801 aaPredicted RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 HOXB4P17483 251 aaPredicted RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 CR2P20023 1033 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 U2AF2P26368 475 aaKnown RBP eCLIP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 MLH1P40692 756 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 SCNN1GP51170 649 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 CLDN6P56747 220 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 CREMQ03060 361 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 UBAP2LQ14157 1087 aaKnown RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 DMC1Q14565 340 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 PSMD5Q16401 504 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 USP39Q53GS9 565 aaKnown RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 ABHD15Q6UXT9 468 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 LINC00114Q6XXX2 140 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 ZNF574Q6ZN55 896 aaPredicted RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 CD163Q86VB7 1156 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 DGKHQ86XP1 1220 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 CEP57Q86XR8 500 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 TRMT2AQ8IZ69 625 aaKnown RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 RPLP0P6Q8NHW5 317 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms