RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 ZNF638Q14966 1978 aaKnown RBP9.57□□□□□ -0.88
SMAD4-215ENST00000592911 ASCC3Q8N3C0 2202 aaKnown RBP9.56□□□□□ -0.88
SMAD4-215ENST00000592911 LRRIQ4A6NIV6 560 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 CHURC1-FNTBB4DL54 471 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 B4GALT5O43286 388 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 CCNT1O60563 726 aaKnown RBP9.56□□□□□ -0.88
SMAD4-215ENST00000592911 NAMPTP43490 491 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 FNTBP49356 437 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 CCINQ13939 588 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 CTTNQ14247 550 aaKnown RBP9.56□□□□□ -0.88
SMAD4-215ENST00000592911 GAS6Q14393 721 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 STPG1Q5TH74 334 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 NCAPH2Q6IBW4 605 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 ZNF280DQ6N043 979 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 YAF2Q8IY57 180 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 CAMKK1Q8N5S9 505 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 APPL2Q8NEU8 664 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 BEST2Q8NFU1 509 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 FAM200AQ8TCP9 573 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 HASPINQ8TF76 798 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 JAKMIP1Q96N16 626 aaKnown RBP9.56□□□□□ -0.88
SMAD4-215ENST00000592911 CORO1BQ9BR76 489 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 CCDC113Q9H0I3 377 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 POLR3FQ9H1D9 316 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-215ENST00000592911 SNTG2Q9NY99 539 aa9.56□□□□□ -0.88
SMAD4-215ENST00000592911 ACACAQ13085 2346 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 FRYQ5TBA9 3013 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 SOBPA7XYQ1 873 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 HEPACAM2A8MVW5 462 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 PPP1R3GB7ZBB8 358 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 CDC45O75419 566 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 KCNK5O95279 499 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 PAX3P23760 479 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 CCNE1P24864 410 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 TKTP29401 623 aaKnown RBP9.55□□□□□ -0.88
SMAD4-215ENST00000592911 CTHP32929 405 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 YARSP54577 528 aaKnown RBP9.55□□□□□ -0.88
SMAD4-215ENST00000592911 AMPD2Q01433 879 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 CYP4A11Q02928 519 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 GRM2Q14416 872 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 LPAL2Q16609 132 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 UNQ6494/PRO21346Q6UXR6 183 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 CCDC26Q8TAB7 109 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 ZSCAN18Q8TBC5 510 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-215ENST00000592911 WASF1Q92558 559 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 CYP4F11Q9HBI6 524 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 TUFT1Q9NNX1 390 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 KCNG1Q9UIX4 513 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 ZZEF1O43149 2961 aa9.55□□□□□ -0.88
SMAD4-215ENST00000592911 ATG2BQ96BY7 2078 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 SPECC1L-ADORA2AF8WAN1 911 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 GDF9O60383 454 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 RPP40O75818 363 aaKnown RBP9.54□□□□□ -0.88
SMAD4-215ENST00000592911 REC8O95072 547 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 PRKCBP05771 671 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 CEACAM1P13688 526 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 KCNE1P15382 129 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 CSRP1P21291 193 aaKnown RBP9.54□□□□□ -0.88
SMAD4-215ENST00000592911 GRM5P41594 1212 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 CLCNKBP51801 687 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 KPNA1P52294 538 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-215ENST00000592911 TMEM132AQ24JP5 1023 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 FBXO43Q4G163 708 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 DAB2IPQ5VWQ8 1189 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 CD300LGQ6UXG3 332 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 ALKAL1Q6UXT8 129 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 ST13P5Q8NFI4 369 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-215ENST00000592911 RABGGTAQ92696 567 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 SUSD3Q96L08 255 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 NACC1Q96RE7 527 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 TSPAN18Q96SJ8 248 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 CCDC94Q9BW85 323 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-215ENST00000592911 TM6SF1Q9BZW5 370 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 BRMS1Q9HCU9 246 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 TNFSF13BQ9Y275 285 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 SNX14Q9Y5W7 946 aa9.54□□□□□ -0.88
SMAD4-215ENST00000592911 LAMA1P25391 3075 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 SMIM28A0A1B0GU29 152 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 MOSPD3O75425 235 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 RHOBTB1O94844 696 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 OAZ2O95190 189 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 CYP11B2P19099 503 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 ATP2B1P20020 1258 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 CCR2P41597 374 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 DPP6P42658 865 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 CCT2P78371 535 aaKnown RBP9.53□□□□□ -0.88
SMAD4-215ENST00000592911 LSM11P83369 360 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMAD4-215ENST00000592911 ORC2Q13416 577 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-215ENST00000592911 COL9A2Q14055 689 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-215ENST00000592911 ELF2Q15723 593 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 CALCRLQ16602 461 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 RNF43Q68DV7 783 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 RUFY3Q7L099 469 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 ERMNQ8TAM6 284 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 DEPTORQ8TB45 409 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 KIFAP3Q92845 792 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 TCEAL4Q96EI5 215 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 IFT74Q96LB3 600 aa9.53□□□□□ -0.88
SMAD4-215ENST00000592911 POLR3CQ9BUI4 534 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-215ENST00000592911 TTC12Q9H892 705 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms