RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GSE1Q14687 1217 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 SYCP1Q15431 976 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 PRPF38BQ5VTL8 546 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 SPOPLQ6IQ16 392 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 DPY19L2P1Q6NXN4 242 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 TRIM65Q6PJ69 517 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 GRPEL1Q9HAV7 217 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 APOBEC3GQ9HC16 384 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.09■□□□□ 0.336e-7■■■■■ 41.2
CSNK1D-212ENST00000580061 MSRAQ9UJ68 235 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 ADAM28Q9UKQ2 775 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 COLQQ9Y215 455 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 SIK3Q9Y2K2 1263 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 RWDD3Q9Y3V2 267 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 NUB1Q9Y5A7 615 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 A0A1W2PQC6 194 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 TPM3P06753 285 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 PBX1P40424 430 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 BRCC3P46736 316 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 KLK7P49862 253 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 NOP14P78316 857 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 SMAD3P84022 425 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 PTPN21Q16825 1174 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 TIGD5Q53EQ6 642 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 ZNF667Q5HYK9 610 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 WDR44Q5JSH3 913 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 TATDN2Q93075 761 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 IGSF21Q96ID5 467 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 NT5C1BQ96P26 610 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 TRIM5Q9C035 493 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 SIX2Q9NPC8 291 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 GDAP2Q9NXN4 497 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 SPG21Q9NZD8 308 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 PCDHB12Q9Y5F1 795 aa17.08■□□□□ 0.32
CSNK1D-212ENST00000580061 CLSTN1O94985 981 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 EFEMP2O95967 443 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 PPM1AP35813 382 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 BMPR1AP36894 532 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 TAP1Q03518 808 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 LRMPQ12912 555 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 LRIT3Q3SXY7 679 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 PHLDB3Q6NSJ2 640 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 FUT10Q6P4F1 479 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 TMEM169Q96HH4 297 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 FAXDC2Q96IV6 333 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 SUSD3Q96L08 255 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 SENP8Q96LD8 212 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 SAMD11Q96NU1 681 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 C17orf80Q9BSJ5 609 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 LSM14BQ9BX40 385 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 APEX2Q9UBZ4 518 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 POLIQ9UNA4 740 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 SNX9Q9Y5X1 595 aa17.07■□□□□ 0.32
CSNK1D-212ENST00000580061 SF3B1O75533 1304 aaKnown RBP eCLIP17.06■□□□□ 0.329e-7■■■■■ 57.4
CSNK1D-212ENST00000580061 C5orf67F2Z3F1 127 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 I3L4J1 428 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 M0QZQ0 153 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 TRAPPC3O43617 180 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 DNAJB2P25686 324 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 CTNNB1P35222 781 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 ZNF75DP51815 510 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 ERVK-21P61565 698 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 TNNC1P63316 161 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 PLCB3Q01970 1234 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 APBA1Q02410 837 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 DSTYKQ6XUX3 929 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 SPRED2Q7Z698 418 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 ARHGEF19Q8IW93 802 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 RNF168Q8IYW5 571 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 PCMTD1Q96MG8 357 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 TGS1Q96RS0 853 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 GPR62Q9BZJ7 368 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 NIF3L1Q9GZT8 377 aa17.06■□□□□ 0.32
CSNK1D-212ENST00000580061 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 CYB561D2O14569 222 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 FGF18O76093 207 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 NOL4O94818 638 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 RB1P06400 928 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 P4HA1P13674 534 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 ASPAP45381 313 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 ELAVL2Q12926 359 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 PPP2R2DQ66LE6 453 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 GJB7Q6PEY0 223 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 DPH6Q7L8W6 267 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 LIMS2Q7Z4I7 341 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 PPM1KQ8N3J5 372 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 TOP6BLQ8N6T0 577 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 KLHL23Q8NBE8 558 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 MRFAP1L1Q96HT8 127 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 MMS19Q96T76 1030 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 VN1R3Q9BXE9 311 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms