RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 DUSP6Q16828 381 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 FOXR2Q6PJQ5 311 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 DSTYKQ6XUX3 929 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 RBM43Q6ZSC3 357 aaKnown RBP16.61■□□□□ 0.25
IFT20-206ENST00000578122 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
IFT20-206ENST00000578122 ZNF516Q92618 1163 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 ZNF560Q96MR9 790 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 KLHL5Q96PQ7 755 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 CDCA3Q99618 268 aaPredicted RBP16.61■□□□□ 0.25
IFT20-206ENST00000578122 DUSP9Q99956 384 aaKnown RBP16.61■□□□□ 0.25
IFT20-206ENST00000578122 MKNK1Q9BUB5 465 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 EMILIN2Q9BXX0 1053 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 SIX4Q9UIU6 781 aa16.61■□□□□ 0.25
IFT20-206ENST00000578122 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
IFT20-206ENST00000578122 SYN3O14994 580 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 SPTLC1O15269 473 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
IFT20-206ENST00000578122 NCK2O43639 380 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 CLASP2O75122 1294 aaKnown RBP16.6■□□□□ 0.25
IFT20-206ENST00000578122 CNPP09543 421 aaKnown RBP16.6■□□□□ 0.25
IFT20-206ENST00000578122 TKTP29401 623 aaKnown RBP16.6■□□□□ 0.25
IFT20-206ENST00000578122 GTF2F1P35269 517 aaKnown RBP eCLIP16.6■□□□□ 0.25
IFT20-206ENST00000578122 VAMP7P51809 220 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 AP3M2P53677 418 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 CLDN10P78369 228 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 PRSS55Q6UWB4 352 aaPredicted RBP16.6■□□□□ 0.25
IFT20-206ENST00000578122 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 USP37Q86T82 979 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 CXorf38Q8TB03 319 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 PIK3R5Q8WYR1 880 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 CEP63Q96MT8 703 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 RXFP1Q9HBX9 757 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.6■□□□□ 0.25
IFT20-206ENST00000578122 TMEM63CQ9P1W3 806 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 R3HCC1Q9Y3T6 440 aaKnown RBP16.6■□□□□ 0.25
IFT20-206ENST00000578122 BRWD1Q9NSI6 2320 aa16.6■□□□□ 0.25
IFT20-206ENST00000578122 M0QZQ0 153 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 PHACTR2O75167 634 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 PNPLA4P41247 253 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 DLG4P78352 724 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 CREMQ03060 361 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 ENPEPQ07075 957 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 BFSP1Q12934 665 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 PSMD5Q16401 504 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 DPCR1Q3MIW9 517 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 SV2CQ496J9 727 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 PDXDC1Q6P996 788 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 EFHBQ8N7U6 833 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 APPL2Q8NEU8 664 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 LNX1Q8TBB1 728 aaPredicted RBP16.59■□□□□ 0.25
IFT20-206ENST00000578122 SYAP1Q96A49 352 aaPredicted RBP16.59■□□□□ 0.25
IFT20-206ENST00000578122 BORCS6Q96GS4 357 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 SENP8Q96LD8 212 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 FNIP2Q9P278 1114 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 DACH1Q9UI36 760 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
IFT20-206ENST00000578122 ARHGEF37A1IGU5 675 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 FSD2A1L4K1 749 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 IKBKBO14920 756 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 C4BPAP04003 597 aaKnown RBP16.58■□□□□ 0.24
IFT20-206ENST00000578122 RPL17P18621 184 aaKnown RBP16.58■□□□□ 0.24
IFT20-206ENST00000578122 KLRC2P26717 231 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 ADAM15Q13444 863 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 BIRC3Q13489 604 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 COL19A1Q14993 1142 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 VARS2Q5ST30 1063 aaKnown RBP16.58■□□□□ 0.24
IFT20-206ENST00000578122 C1orf220Q5T0J3 134 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 CAVIN1Q6NZI2 390 aaKnown RBP16.58■□□□□ 0.24
IFT20-206ENST00000578122 SASS6Q6UVJ0 657 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 ANKS3Q6ZW76 656 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 FILIP1Q7Z7B0 1213 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 PABPC5Q96DU9 382 aaKnown RBP16.58■□□□□ 0.24
IFT20-206ENST00000578122 HPDLQ96IR7 371 aa16.58■□□□□ 0.24
IFT20-206ENST00000578122 MTCL1Q9Y4B5 1905 aaKnown RBP16.57■□□□□ 0.24
IFT20-206ENST00000578122 KPNA7A9QM74 516 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 H7C4K7 107 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 CYB561D2O14569 222 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 TEX28O15482 410 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 LINC01565O15544 149 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 FGFR1OPO95684 399 aaKnown RBP16.57■□□□□ 0.24
IFT20-206ENST00000578122 ADH1AP07327 375 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 TRIM49P0CI25 452 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 TRIM49CP0CI26 452 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 ODC1P11926 461 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 TYMPP19971 482 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 NDUFV1P49821 464 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 MCCD1P59942 119 aaPredicted RBP16.57■□□□□ 0.24
IFT20-206ENST00000578122 MYO1EQ12965 1108 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 TRPC3Q13507 836 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 CTC1Q2NKJ3 1217 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 TDRD10Q5VZ19 366 aaKnown RBP16.57■□□□□ 0.24
IFT20-206ENST00000578122 LLGL2Q6P1M3 1020 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 PPFIBP1Q86W92 1011 aa16.57■□□□□ 0.24
IFT20-206ENST00000578122 SLC22A17Q8WUG5 538 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms