RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ATOH1Q92858 354 aaPredicted RBP17.02■□□□□ 0.32
USB1-208ENST00000563207 SMARCE1Q969G3 411 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 SNX27Q96L92 541 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 CCDC94Q9BW85 323 aaPredicted RBP17.02■□□□□ 0.32
USB1-208ENST00000563207 MFSD1Q9H3U5 465 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 ANKFY1Q9P2R3 1169 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 MTRRQ9UBK8 725 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 DPP7Q9UHL4 492 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 POLIQ9UNA4 740 aa17.02■□□□□ 0.32
USB1-208ENST00000563207 TMEM189-UBE2V1I3L0A0 370 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 PODXLO00592 558 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 CLDN3O15551 220 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 C1RP00736 705 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 MCF2P10911 925 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 FSHRP23945 695 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 MCM4P33991 863 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 YARSP54577 528 aaKnown RBP17.01■□□□□ 0.31
USB1-208ENST00000563207 SNRPFP62306 86 aaKnown RBP17.01■□□□□ 0.31
USB1-208ENST00000563207 CREMQ03060 361 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 HTR4Q13639 388 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 RAB33AQ14088 237 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 KYAT1Q16773 422 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 PPM1LQ5SGD2 360 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 ZBTB41Q5SVQ8 909 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 PARM1Q6UWI2 310 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 CYP26C1Q6V0L0 522 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 ACAP3Q96P50 834 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 IGSF9Q9P2J2 1179 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 TUBGCP4Q9UGJ1 667 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 FBXL21Q9UKT6 434 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 CA14Q9ULX7 337 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 NUMBLQ9Y6R0 609 aa17.01■□□□□ 0.31
USB1-208ENST00000563207 PIEZO1Q92508 2521 aa17■□□□□ 0.31
USB1-208ENST00000563207 ANHXE9PGG2 379 aa17■□□□□ 0.31
USB1-208ENST00000563207 NRG2O14511 850 aaPredicted RBP17■□□□□ 0.31
USB1-208ENST00000563207 DMDP11532 3685 aa17■□□□□ 0.31
USB1-208ENST00000563207 TNFSF9P41273 254 aa17■□□□□ 0.31
USB1-208ENST00000563207 CASP5P51878 434 aa17■□□□□ 0.31
USB1-208ENST00000563207 MCL1Q07820 350 aa17■□□□□ 0.31
USB1-208ENST00000563207 ELAVL2Q12926 359 aaKnown RBP17■□□□□ 0.31
USB1-208ENST00000563207 ELMSAN1Q6PJG2 1045 aa17■□□□□ 0.31
USB1-208ENST00000563207 SYCP3Q8IZU3 236 aa17■□□□□ 0.31
USB1-208ENST00000563207 GPR152Q8TDT2 470 aa17■□□□□ 0.31
USB1-208ENST00000563207 FGF14Q92915 247 aa17■□□□□ 0.31
USB1-208ENST00000563207 PRRX2Q99811 253 aa17■□□□□ 0.31
USB1-208ENST00000563207 SLC39A2Q9NP94 309 aa17■□□□□ 0.31
USB1-208ENST00000563207 CNTN3Q9P232 1028 aa17■□□□□ 0.31
USB1-208ENST00000563207 CGNQ9P2M7 1197 aaKnown RBP17■□□□□ 0.31
USB1-208ENST00000563207 DNMT3BQ9UBC3 853 aaKnown RBP17■□□□□ 0.31
USB1-208ENST00000563207 PCDHA5Q9Y5H7 936 aa17■□□□□ 0.31
USB1-208ENST00000563207 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
USB1-208ENST00000563207 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
USB1-208ENST00000563207 CXCL8P10145 99 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 KCNE1P15382 129 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 CLCN5P51795 746 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 ARPP19P56211 112 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 STK4Q13043 487 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 NOLC1Q14978 699 aaKnown RBP eCLIP16.99■□□□□ 0.31
USB1-208ENST00000563207 VARS2Q5ST30 1063 aaKnown RBP16.99■□□□□ 0.31
USB1-208ENST00000563207 LIN9Q5TKA1 542 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 SCFD1Q8WVM8 642 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 ING5Q8WYH8 240 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 FGF13Q92913 245 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 HPS3Q969F9 1004 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 UROC1Q96N76 676 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 IKZF4Q9H2S9 585 aa16.99■□□□□ 0.31
USB1-208ENST00000563207 TOPORSQ9NS56 1045 aaPredicted RBP16.99■□□□□ 0.31
USB1-208ENST00000563207 CFAP54Q96N23 3096 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 A0A0B4J269 797 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 WDR27A2RRH5 827 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
USB1-208ENST00000563207 TBC1D4O60343 1298 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 SEC24AO95486 1093 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 AOC1P19801 751 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 GARTP22102 1010 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 PPP1R2P41236 205 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 GUCY2FP51841 1108 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 POU5F1Q01860 360 aaKnown RBP16.98■□□□□ 0.31
USB1-208ENST00000563207 ROR1Q01973 937 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 KNOP1Q1ED39 458 aaKnown RBP16.98■□□□□ 0.31
USB1-208ENST00000563207 SLC5A9Q2M3M2 681 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 COBLL1Q53SF7 1204 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 ZNF658Q5TYW1 1059 aaPredicted RBP16.98■□□□□ 0.31
USB1-208ENST00000563207 KIAA0895Q8NCT3 520 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 GOLGA5Q8TBA6 731 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 FGFBP2Q9BYJ0 223 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 NUP62CLQ9H1M0 184 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 CLSTN2Q9H4D0 955 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.98■□□□□ 0.31
USB1-208ENST00000563207 BACE2Q9Y5Z0 518 aa16.98■□□□□ 0.31
USB1-208ENST00000563207 ANK1P16157 1881 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 TISP43B9A030 160 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 HNRNPA1P09651 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
USB1-208ENST00000563207 MATR3P43243 847 aaKnown RBP eCLIP16.97■□□□□ 0.31
USB1-208ENST00000563207 GPC5P78333 572 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 KCNA1Q09470 495 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 SLC39A4Q6P5W5 647 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 HS2ST1Q7LGA3 356 aa16.97■□□□□ 0.31
USB1-208ENST00000563207 GUF1Q8N442 669 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms