RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 MCM4P33991 863 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 CASP4P49662 377 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 TFAMQ00059 246 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 PSMD5Q16401 504 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 CAMK4Q16566 473 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 EDRF1Q3B7T1 1238 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 TMEM31Q5JXX7 168 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 LMBRD2Q68DH5 695 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 SCARA3Q6AZY7 606 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 CENPPQ6IPU0 288 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 KIAA1841Q6NSI8 718 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 ZC3H3Q8IXZ2 948 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 OR5B17Q8NGF7 314 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 GPT2Q8TD30 523 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 CGRRF1Q99675 332 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 CLSTN2Q9H4D0 955 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 MTRRQ9UBK8 725 aa16.75■□□□□ 0.27
RABGGTA-219ENST00000560871 PLXNA3P51805 1871 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 DCXO43602 365 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 ITGB3P05106 788 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 ADH1AP07327 375 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 CLCN4P51793 760 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 PMS1P54277 932 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 LILRA4P59901 499 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 CREMQ03060 361 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 MRPL58Q14197 206 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 CBX2Q14781 532 aaPredicted RBP16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 ISM2Q6H9L7 571 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 CEP57Q86XR8 500 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 RNF135Q8IUD6 432 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 BORCS6Q96GS4 357 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 CLSTN3Q9BQT9 956 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 APOL5Q9BWW9 433 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 KIAA1468Q9P260 1216 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 ITGA11Q9UKX5 1188 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 PCDHB8Q9UN66 801 aa16.74■□□□□ 0.27
RABGGTA-219ENST00000560871 MTCL1Q9Y4B5 1905 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 GOLGA6L22H0YM25 854 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 BIN1O00499 593 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 MAPK13O15264 365 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 TBC1D4O60343 1298 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 AKAP3O75969 853 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 EPCAMP16422 314 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 RPL17P18621 184 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 PAX3P23760 479 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 CLDN10P78369 228 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 VARS2Q5ST30 1063 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 RSPO2Q6UXX9 243 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 PPFIBP1Q86W92 1011 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 PARD3BQ8TEW8 1205 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 ANKRD36BP1Q96IX9 119 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 ADAM7Q9H2U9 754 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 BACE2Q9Y5Z0 518 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 C5orf42Q9H799 3197 aa16.73■□□□□ 0.27
RABGGTA-219ENST00000560871 TRIM49BA6NDI0 452 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 LRRIQ3A6PVS8 624 aaPredicted RBP16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 ADAM12O43184 909 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 DLATP10515 647 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 CCNE1P24864 410 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 KLRC2P26717 231 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 PPP1R2P41236 205 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 TAF6P49848 677 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 ITIH3Q06033 890 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 CEP135Q66GS9 1140 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 ANKS3Q6ZW76 656 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 LRRC52Q8N7C0 313 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 ZNF516Q92618 1163 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 CCDC127Q96BQ5 260 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 ZNF560Q96MR9 790 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 FNBP1Q96RU3 617 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 NUP62CLQ9H1M0 184 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 DZANK1Q9NVP4 752 aa16.72■□□□□ 0.27
RABGGTA-219ENST00000560871 DENND4AQ7Z401 1863 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 FAM86C2PA6NEL3 165 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 PSMA7O14818 248 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 C1RP00736 705 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 TYMPP19971 482 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 RPL13P26373 211 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 PNPLA4P41247 253 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 MCCD1P59942 119 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 DLG4P78352 724 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 LRRC63Q05C16 580 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 DUOXA2Q1HG44 320 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 SV2CQ496J9 727 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 C1orf220Q5T0J3 134 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 ANKRD40Q6AI12 368 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 CES5AQ6NT32 575 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 LILRA6Q6PI73 481 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 FOXR2Q6PJQ5 311 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 TRAPPC11Q7Z392 1133 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 APPL2Q8NEU8 664 aa16.71■□□□□ 0.27
RABGGTA-219ENST00000560871 DHTKD1Q96HY7 919 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms