RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 GAS8O95995 478 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 IVDP26440 423 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 STX2P32856 288 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 ITGA8P53708 1063 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
DDB1-224ENST00000545894 LLGL1Q15334 1064 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 KYNUQ16719 465 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 ARHGEF18Q6ZSZ5 1173 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 GRK7Q8WTQ7 553 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 CLEC4DQ8WXI8 215 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 TGS1Q96RS0 853 aaKnown RBP12.2□□□□□ -0.46
DDB1-224ENST00000545894 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 PORCNQ9H237 461 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■■■□ 21.9
DDB1-224ENST00000545894 CHST7Q9NS84 486 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 WBP1LQ9NX94 342 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 RBBP6Q7Z6E9 1792 aaKnown RBP12.2□□□□□ -0.46
DDB1-224ENST00000545894 IPO5O00410 1097 aaKnown RBP12.2□□□□□ -0.46
DDB1-224ENST00000545894 GH1P01241 217 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 KRT16P08779 473 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 PLS3P13797 630 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 ATF2P15336 505 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 MPP2Q14168 576 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
DDB1-224ENST00000545894 ACAD10Q6JQN1 1059 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 ASRGL1Q7L266 308 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 KIF2BQ8N4N8 673 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 FITM2Q8N6M3 262 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 ZSWIM2Q8NEG5 633 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 THOC1Q96FV9 657 aaKnown RBP12.2□□□□□ -0.46
DDB1-224ENST00000545894 MAGEB18Q96M61 343 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 RIT2Q99578 217 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 NKIRAS1Q9NYS0 192 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 NINJ2Q9NZG7 142 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 LGALS13Q9UHV8 139 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 ANAPC5Q9UJX4 755 aa12.2□□□□□ -0.46
DDB1-224ENST00000545894 ADGRA3Q8IWK6 1321 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 CEP350Q5VT06 3117 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 SORBS3O60504 671 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 SNRPFP62306 86 aaKnown RBP12.19□□□□□ -0.46
DDB1-224ENST00000545894 RNF43Q68DV7 783 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 NCAPG2Q86XI2 1143 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 ATG4AQ8WYN0 398 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 KIFAP3Q92845 792 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 TRIM7Q9C029 511 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 BATF3Q9NR55 127 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 RNF146Q9NTX7 359 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 DNAJC17Q9NVM6 304 aaKnown RBP12.19□□□□□ -0.46
DDB1-224ENST00000545894 KLHL14Q9P2G3 628 aa12.19□□□□□ -0.46
DDB1-224ENST00000545894 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
DDB1-224ENST00000545894 FOXO6A8MYZ6 492 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 DDX39AO00148 427 aaKnown RBP12.18□□□□□ -0.46
DDB1-224ENST00000545894 NFIBO00712 420 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 CDH16O75309 829 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
DDB1-224ENST00000545894 SLC25A27O95847 323 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 ADRB2P07550 413 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 MAPK4P31152 587 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 ADCY8P40145 1251 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 SKIV2L2P42285 1042 aaKnown RBP12.18□□□□□ -0.46
DDB1-224ENST00000545894 MSH2P43246 934 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 PSEN1P49768 467 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 LACTBP83111 547 aaPredicted RBP12.18□□□□□ -0.46
DDB1-224ENST00000545894 STRN3Q13033 797 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 TRIP13Q15645 432 aaPredicted RBP12.18□□□□□ -0.46
DDB1-224ENST00000545894 TKFCQ3LXA3 575 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 PPP1R21Q6ZMI0 780 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 HAUS6Q7Z4H7 955 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 CYP4X1Q8N118 509 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 PRCCQ92733 491 aaPredicted RBP12.18□□□□□ -0.46
DDB1-224ENST00000545894 SEMA4DQ92854 862 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 GRAMD1AQ96CP6 724 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 RMDN2Q96LZ7 410 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 DCLK3Q9C098 648 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 ANAPC7Q9UJX3 599 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 STK38LQ9Y2H1 464 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 COL11A1P12107 1806 aaPredicted RBP12.18□□□□□ -0.46
DDB1-224ENST00000545894 PCNTO95613 3336 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 CCNB1P14635 433 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 CCNA1P78396 465 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 GTF2BQ00403 316 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 CCDC15Q0P6D6 951 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 ACVR2BQ13705 512 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 MTFR1Q15390 333 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 KRT39Q6A163 491 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 SHCBP1Q8NEM2 672 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 ATL2Q8NHH9 583 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 HELQQ8TDG4 1101 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 DDX1Q92499 740 aaKnown RBP12.18□□□□□ -0.46
DDB1-224ENST00000545894 IWS1Q96ST2 819 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 CCDC77Q9BR77 488 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 NAALADL1Q9UQQ1 740 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 ACTL7BQ9Y614 415 aa12.18□□□□□ -0.46
DDB1-224ENST00000545894 GOLGA8IPA6NC78 632 aa12.17□□□□□ -0.46
DDB1-224ENST00000545894 GOLGA8JA6NMD2 632 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms