RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 LIMA1Q9UHB6 759 aaKnown RBP12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 R3HCC1Q9Y3T6 440 aaKnown RBP12.75□□□□□ -0.37
CYB561A3-214ENST00000540139 ANK1P16157 1881 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 LAMA3Q16787 3333 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 PTPRJQ12913 1337 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 NRP1O14786 923 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 TRAPPC3O43617 180 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 B4GALT3O60512 393 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 B3GAT3O94766 335 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 AFPP02771 609 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 TPM2P07951 284 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 MYOGP15173 224 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 PBX2P40425 430 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 CLCNKBP51801 687 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 KRT17Q04695 432 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 PPP3CAQ08209 521 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 KCNH2Q12809 1159 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 ELOAQ14241 798 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 SPOUT1Q5T280 376 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 IGSF21Q96ID5 467 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 TUBGCP2Q9BSJ2 902 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 C11orf84Q9BUA3 381 aaPredicted RBP12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 MTMR12Q9C0I1 747 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 DNAJB4Q9UDY4 337 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 TUBGCP4Q9UGJ1 667 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 TDRD15B5MCY1 1934 aaKnown RBP12.74□□□□□ -0.37
CYB561A3-214ENST00000540139 CASTOR2A6NHX0 329 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 GOLGA6L19H0YKK7 550 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 TRIM49P0CI25 452 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 TRIM49CP0CI26 452 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 OR1G1P47890 313 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 GCLMP48507 274 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 FMO5P49326 533 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 MXI1P50539 228 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 LILRA4P59901 499 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 TRPC3Q13507 836 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 NCOA4Q13772 614 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 VWA3BQ502W6 1294 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 EPC2Q52LR7 807 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 DCAF17Q5H9S7 520 aaPredicted RBP12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 TCERG1LQ5VWI1 586 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 CD300LGQ6UXG3 332 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 DDX53Q86TM3 631 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 FBXL13Q8NEE6 735 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 TMEM169Q96HH4 297 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 NKX2-4Q9H2Z4 354 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 FAM124BQ9H5Z6 455 aaPredicted RBP12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 MARCH5Q9NX47 278 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 GDAP2Q9NXN4 497 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 PUF60Q9UHX1 559 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 ADAM28Q9UKQ2 775 aa12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 PDCD11Q14690 1871 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 LAMA2P24043 3122 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-214ENST00000540139 SF3B1O75533 1304 aaKnown RBP eCLIP12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 H3BNC9 293 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 M0QZQ0 153 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 SYN3O14994 580 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 PHACTR2O75167 634 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 TADA2AO75478 443 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 FGF18O76093 207 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 ITGB3P05106 788 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 CTNNB1P35222 781 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 TAF6P49848 677 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 PRSS12P56730 875 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 BIRC3Q13489 604 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 BMS1Q14692 1282 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 KRT31Q15323 416 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 SV2CQ496J9 727 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 LMBRD2Q68DH5 695 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 PDE12Q6L8Q7 609 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 LUZP1Q86V48 1076 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 CCDC150Q8NCX0 1101 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 SUSD3Q96L08 255 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 LMAN2LQ9H0V9 348 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 NDST4Q9H3R1 872 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 RAB20Q9NX57 234 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
CYB561A3-214ENST00000540139 KPNA7A9QM74 516 aa12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 ARHGEF15O94989 841 aa12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 KIF4AO95239 1232 aa12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 VNN1O95497 513 aa12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 ASS1P00966 412 aaKnown RBP12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 HLA-DRAP01903 254 aa12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 TYMPP19971 482 aa12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 GUCY2FP51841 1108 aa12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
CYB561A3-214ENST00000540139 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms