RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 INTS2Q9H0H0 1204 aaKnown RBP13.37□□□□□ -0.27
SNX17-208ENST00000493711 CXCL16Q9H2A7 254 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 NRDE2Q9H7Z3 1164 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 GRPEL1Q9HAV7 217 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 STXBP5LQ9Y2K9 1186 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
SNX17-208ENST00000493711 DDHD2O94830 711 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 VNN1O95497 513 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 ASS1P00966 412 aaKnown RBP13.36□□□□□ -0.27
SNX17-208ENST00000493711 TBXAS1P24557 533 aaPredicted RBP13.36□□□□□ -0.27
SNX17-208ENST00000493711 OR1G1P47890 313 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 GATMP50440 423 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 SOX4Q06945 474 aaPredicted RBP13.36□□□□□ -0.27
SNX17-208ENST00000493711 ZNF699Q32M78 642 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 ZNF667Q5HYK9 610 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 ENOSF1Q7L5Y1 443 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 ZNF280BQ86YH2 543 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 CXorf38Q8TB03 319 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 CLP1Q92989 425 aaKnown RBP13.36□□□□□ -0.27
SNX17-208ENST00000493711 JAKMIP2Q96AA8 810 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 MRFAP1L1Q96HT8 127 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 NAP1L5Q96NT1 182 aaPredicted RBP13.36□□□□□ -0.27
SNX17-208ENST00000493711 NT5C1BQ96P26 610 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 XPO4Q9C0E2 1151 aaKnown RBP13.36□□□□□ -0.27
SNX17-208ENST00000493711 DNAI2Q9GZS0 605 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 CWH43Q9H720 699 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 PLCB1Q9NQ66 1216 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 SIX4Q9UIU6 781 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 MSRAQ9UJ68 235 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 NUB1Q9Y5A7 615 aa13.36□□□□□ -0.27
SNX17-208ENST00000493711 COL4A6Q14031 1691 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 CASTOR2A6NHX0 329 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 KPNA7A9QM74 516 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 NRP1O14786 923 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 TADA2AO75478 443 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 B3GAT3O94766 335 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 CST3P01034 146 aaPredicted RBP13.35□□□□□ -0.27
SNX17-208ENST00000493711 GALTP07902 379 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 SLC11A1P49279 550 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 CLCNKBP51801 687 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 BCAR1P56945 870 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 LILRA4P59901 499 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 MYL6P60660 151 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 YWHAEP62258 255 aaKnown RBP13.35□□□□□ -0.27
SNX17-208ENST00000493711 TNNC1P63316 161 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 TRIM65Q6PJ69 517 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 KCNT2Q6UVM3 1135 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 DPH6Q7L8W6 267 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 FMNL3Q8IVF7 1028 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 NEK11Q8NG66 645 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 SPATA18Q8TC71 538 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 PCMTD1Q96MG8 357 aaPredicted RBP13.35□□□□□ -0.27
SNX17-208ENST00000493711 PLVAPQ9BX97 442 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 EDEM3Q9BZQ6 932 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 NIF3L1Q9GZT8 377 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 XYLT2Q9H1B5 865 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 GDAP2Q9NXN4 497 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 SPG21Q9NZD8 308 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 FBXL5Q9UKA1 691 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 DSEQ9UL01 958 aa13.35□□□□□ -0.27
SNX17-208ENST00000493711 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNX17-208ENST00000493711 MRPL42Q9Y6G3 142 aaKnown RBP13.35□□□□□ -0.27
SNX17-208ENST00000493711 HUS1O60921 280 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 CLSTN1O94985 981 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 RB1P06400 928 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 PON1P27169 355 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 AARSP49588 968 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNX17-208ENST00000493711 ZNF75DP51815 510 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 GUCY2FP51841 1108 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 MFAP3P55082 362 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 NOP14P78316 857 aaKnown RBP13.34□□□□□ -0.27
SNX17-208ENST00000493711 SMAD3P84022 425 aaKnown RBP13.34□□□□□ -0.27
SNX17-208ENST00000493711 GCNT1Q02742 428 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 KRT17Q04695 432 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 TRIM14Q14142 442 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 SYCP1Q15431 976 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 TMCO2Q7Z6W1 182 aaPredicted RBP13.34□□□□□ -0.27
SNX17-208ENST00000493711 TMEM86AQ8N2M4 240 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 TOP6BLQ8N6T0 577 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 COLGALT1Q8NBJ5 622 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 LMO3Q8TAP4 145 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 CRACR2AQ9BSW2 395 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 CYP3A43Q9HB55 503 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 GOLGA2P5Q9HBQ8 144 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 APEX2Q9UBZ4 518 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 DNAJB4Q9UDY4 337 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 ADAM28Q9UKQ2 775 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 SIK3Q9Y2K2 1263 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 SF3B1O75533 1304 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNX17-208ENST00000493711 ITIH6Q6UXX5 1313 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 SCN5AQ14524 2016 aa13.34□□□□□ -0.27
SNX17-208ENST00000493711 TEX33O43247 280 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 TPM1P09493 284 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 ODC1P11926 461 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
SNX17-208ENST00000493711 CDC25BP30305 580 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms