RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ABCA9Q8IUA7 1624 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CASP8AP2Q9UKL3 1982 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 ZMYM4Q5VZL5 1548 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.17□□□□□ -1.95e-7■□□□□ 8.9
HMGN4-202ENST00000477243 IRS2Q9Y4H2 1338 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 CREBBPQ92793 2442 aa3.17□□□□□ -1.9
HMGN4-202ENST00000477243 COL15A1P39059 1388 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CARMIL1Q5VZK9 1371 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 KDM5DQ9BY66 1539 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC78A2IDD5 438 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 HMX3A6NHT5 357 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 TMEM110-MUSTN1A8MSY1 372 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 NT5C1B-RDH14C9J2C7 533 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 H3BUI4 141 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 H7C1W4 665 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 PODXLO00592 558 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 DVL2O14641 736 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 AURKAO14965 403 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SLU7O95391 586 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 ANXA2P07355 339 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 BMP2P12643 396 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 MYL4P12829 197 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 KRT13P13646 458 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 RHOQP17081 205 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 EDNRBP24530 442 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 PTX3P26022 381 aaPredicted RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 KRT2P35908 639 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 ETV3P41162 512 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 RGS2P41220 211 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 HK3P52790 923 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 MANFP55145 182 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SUMO3P55854 103 aaPredicted RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 ACTR2P61160 394 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 AKAP17AQ02040 695 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CREB5Q02930 508 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SPIRE1Q08AE8 756 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 AP1B1Q10567 949 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 LRMPQ12912 555 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 MALLQ13021 153 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 STK4Q13043 487 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 LSAMPQ13449 338 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SPIDRQ14159 915 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 PUM1Q14671 1186 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 ANKRD1Q15327 319 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 E2F5Q15329 346 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SURF1Q15526 300 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 TARBP2Q15633 366 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 RAB30Q15771 203 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SMAD1Q15797 465 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 BAK1Q16611 211 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 TMEM266Q2M3C6 531 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CTXN3Q4LDR2 81 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 TCP11X2Q5H9J9 407 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 C1orf141Q5JVX7 400 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 FAM26FQ5R3K3 315 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 FAM182BQ5T319 152 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 MAP3K21Q5TCX8 1036 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 PRAMEF13Q5VWM6 474 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 EEF1DP3Q658K8 133 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CIAPIN1Q6FI81 312 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 NFRKBQ6P4R8 1299 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CCDC62Q6P9F0 684 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 IYDQ6PHW0 289 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 FAM47EQ6ZV65 393 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 R3HCC1LQ7Z5L2 792 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 RTN4RL1Q86UN2 441 aaPredicted RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SESTD1Q86VW0 696 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CHD1LQ86WJ1 897 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 GATAD2AQ86YP4 633 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 EGFL6Q8IUX8 553 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 PHYKPLQ8IUZ5 450 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 KSR1Q8IVT5 923 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 RNF168Q8IYW5 571 aaPredicted RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 NLGN4XQ8N0W4 816 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 ADSSL1Q8N142 457 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 LRRC71Q8N4P6 559 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 MIGA1Q8NAN2 632 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 USP38Q8NB14 1042 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 RCBTB1Q8NDN9 531 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CREB3L4Q8TEY5 395 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 AFG1LQ8WV93 481 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 RNF141Q8WVD5 230 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 LRRC59Q96AG4 307 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 NMD3Q96D46 503 aaKnown RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 KIF1BPQ96EK5 621 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 WDR89Q96FK6 387 aaPredicted RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 BICD1Q96G01 975 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 SLC35A4Q96G79 324 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CALML4Q96GE6 196 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 CHAMP1Q96JM3 812 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 MOGAT1Q96PD6 335 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 TSGA13Q96PP4 275 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 MMP19Q99542 508 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 C7orf25Q9BPX7 421 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 DPH2Q9BQC3 489 aaPredicted RBP3.16□□□□□ -1.9
HMGN4-202ENST00000477243 GPR63Q9BZJ6 419 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 FOXQ1Q9C009 403 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 NRSN2Q9GZP1 204 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 DNAI2Q9GZS0 605 aa3.16□□□□□ -1.9
HMGN4-202ENST00000477243 PRDM14Q9GZV8 571 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms