RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 PCDHA13Q9Y5I0 950 aa16.55■□□□□ 0.24
GYPC-205ENST00000464053 ARL5CA6NH57 179 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 CHRNB2P17787 502 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 ATICP31939 592 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 CCL23P55773 120 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 TCTN1Q2MV58 587 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 TMEM270Q6UE05 265 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 ECHDC2Q86YB7 292 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 PALB2Q86YC2 1186 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 GLYCTKQ8IVS8 523 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 HACE1Q8IYU2 909 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 DBF4BQ8NFT6 615 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 SLC30A5Q8TAD4 765 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 AGPAT1Q99943 283 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 SDCBP2Q9H190 292 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 VRTNQ9H8Y1 702 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 CISHQ9NSE2 258 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 TRIM10Q9UDY6 481 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 NENFQ9UMX5 172 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 CNTN6Q9UQ52 1028 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 GIT1Q9Y2X7 761 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 FAM170AA1A519 330 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 ANO9A1A5B4 782 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 C9IYK1 514 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
GYPC-205ENST00000464053 CYP11B1P15538 503 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 CDH8P55286 799 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 LRRC26Q2I0M4 334 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 PLEKHG4Q58EX7 1191 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 TAF3Q5VWG9 929 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 ZNF598Q86UK7 904 aaKnown RBP16.54■□□□□ 0.24
GYPC-205ENST00000464053 TSPAN18Q96SJ8 248 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 BCO2Q9BYV7 579 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 LACRTQ9GZZ8 138 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 SMYD3Q9H7B4 428 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 NAGPAQ9UK23 515 aa16.54■□□□□ 0.24
GYPC-205ENST00000464053 R3HCC1Q9Y3T6 440 aaKnown RBP16.54■□□□□ 0.24
GYPC-205ENST00000464053 STAU1O95793 577 aaKnown RBP16.53■□□□□ 0.24
GYPC-205ENST00000464053 CYP2C18P33260 490 aa16.53■□□□□ 0.24
GYPC-205ENST00000464053 MAGEA1P43355 309 aa16.53■□□□□ 0.24
GYPC-205ENST00000464053 SCNN1GP51170 649 aa16.53■□□□□ 0.24
GYPC-205ENST00000464053 VAV2P52735 878 aa16.53■□□□□ 0.24
GYPC-205ENST00000464053 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
GYPC-205ENST00000464053 NAB2Q15742 525 aa16.53■□□□□ 0.24
GYPC-205ENST00000464053 KIAA1328Q86T90 577 aa16.53■□□□□ 0.24
GYPC-205ENST00000464053 RPUSD2Q8IZ73 545 aaKnown RBP16.53■□□□□ 0.24
GYPC-205ENST00000464053 RBBP8NLQ8NC74 664 aaPredicted RBP16.53■□□□□ 0.24
GYPC-205ENST00000464053 DDX1Q92499 740 aaKnown RBP16.53■□□□□ 0.24
GYPC-205ENST00000464053 IRX2Q9BZI1 471 aaPredicted RBP16.53■□□□□ 0.24
GYPC-205ENST00000464053 RSAD1Q9HA92 442 aa16.53■□□□□ 0.24
GYPC-205ENST00000464053 CACNG4Q9UBN1 327 aa16.53■□□□□ 0.24
GYPC-205ENST00000464053 PIRO00625 290 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 MMEP08473 750 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 CYP3A5P20815 502 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 TNFAIP3P21580 790 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 IGFBP6P24592 240 aaPredicted RBP16.52■□□□□ 0.24
GYPC-205ENST00000464053 ANXA13P27216 316 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 PTPN14Q15678 1187 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 SLC24A5Q71RS6 500 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 VPS36Q86VN1 386 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 PGBD4Q96DM1 585 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 RPS6KC1Q96S38 1066 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 PCDHB18PQ96TA0 734 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 TMEM106CQ9BVX2 250 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 PACSIN1Q9BY11 444 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 MCOLN1Q9GZU1 580 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 TSPYL2Q9H2G4 693 aaPredicted RBP16.52■□□□□ 0.24
GYPC-205ENST00000464053 TBX21Q9UL17 535 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 DUSP10Q9Y6W6 482 aa16.52■□□□□ 0.24
GYPC-205ENST00000464053 MKI67P46013 3256 aaKnown RBP16.52■□□□□ 0.23
GYPC-205ENST00000464053 GOLGA6L9A6NEM1 432 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 XPOTO43592 962 aaKnown RBP16.52■□□□□ 0.23
GYPC-205ENST00000464053 SKIP12755 728 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 ZNF132P52740 706 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 FAM189BP81408 668 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 FMO1Q01740 532 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 MYO1EQ12965 1108 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 ZNF394Q53GI3 561 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 CCDC122Q5T0U0 273 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 ALKBH5Q6P6C2 394 aaKnown RBP16.52■□□□□ 0.23
GYPC-205ENST00000464053 LRRC52Q8N7C0 313 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 SEPT11Q9NVA2 429 aaKnown RBP16.52■□□□□ 0.23
GYPC-205ENST00000464053 TAS2R14Q9NYV8 317 aa16.52■□□□□ 0.23
GYPC-205ENST00000464053 TDRD15B5MCY1 1934 aaKnown RBP16.51■□□□□ 0.23
GYPC-205ENST00000464053 SPTLC1O15269 473 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 POMCP01189 267 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 THP07101 528 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 LRPAP1P30533 357 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 PDE6CP51160 858 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 CDR2Q01850 454 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 ARHGAP29Q52LW3 1261 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 FAXDC2Q96IV6 333 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 FTHL17Q9BXU8 183 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 HMGXB4Q9UGU5 601 aa16.51■□□□□ 0.23
GYPC-205ENST00000464053 TMCO5BA8MYB1 307 aa16.5■□□□□ 0.23
GYPC-205ENST00000464053 ENPP3O14638 875 aa16.5■□□□□ 0.23
GYPC-205ENST00000464053 TNNT1P13805 278 aa16.5■□□□□ 0.23
GYPC-205ENST00000464053 TNNC1P63316 161 aa16.5■□□□□ 0.23
GYPC-205ENST00000464053 WHAMMQ8TF30 809 aa16.5■□□□□ 0.23
GYPC-205ENST00000464053 MMS19Q96T76 1030 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms