RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 PDE4DIPQ5VU43 2346 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.71■□□□□ 0.11
SHANK2-210ENST00000449116 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.71■□□□□ 0.11
SHANK2-210ENST00000449116 SPTLC1O15269 473 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 TADA2AO75478 443 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 NOL4O94818 638 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 TRIM21P19474 475 aaKnown RBP15.71■□□□□ 0.11
SHANK2-210ENST00000449116 RFX1P22670 979 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 CDC25BP30305 580 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 AARSP49588 968 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHANK2-210ENST00000449116 TNNC1P63316 161 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 APBA1Q02410 837 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 PHLDB3Q6NSJ2 640 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 KCNT2Q6UVM3 1135 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 CD300LGQ6UXG3 332 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 CHRDL2Q6WN34 429 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 ARHGEF19Q8IW93 802 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 COLGALT1Q8NBJ5 622 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 HASPINQ8TF76 798 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 CLP1Q92989 425 aaKnown RBP15.71■□□□□ 0.11
SHANK2-210ENST00000449116 TATDN2Q93075 761 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 IQCDQ96DY2 449 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 FAM81BQ96LP2 452 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 NUP58Q9BVL2 599 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 NIF3L1Q9GZT8 377 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 GANQ9H2C0 597 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 PRO3102Q9H379 93 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 AAASQ9NRG9 546 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 GDAP2Q9NXN4 497 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 NXF1Q9UBU9 619 aaKnown RBP15.71■□□□□ 0.11
SHANK2-210ENST00000449116 FBXL5Q9UKA1 691 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 DAAM1Q9Y4D1 1078 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 PCDHA11Q9Y5I1 949 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHANK2-210ENST00000449116 SNX9Q9Y5X1 595 aa15.71■□□□□ 0.11
SHANK2-210ENST00000449116 LCHNA4D1U4 455 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 NT5C1B-RDH14C9J2C7 533 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 F8W810 466 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 ITGB1P05556 798 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 UCHL3P15374 230 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 TBXAS1P24557 533 aaPredicted RBP15.7■□□□□ 0.1
SHANK2-210ENST00000449116 IGFBP6P24592 240 aaPredicted RBP15.7■□□□□ 0.1
SHANK2-210ENST00000449116 PBX3P40426 434 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 ASPAP45381 313 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 GCNT1Q02742 428 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 CUL2Q13617 745 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 FIGNQ5HY92 759 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 DSTYKQ6XUX3 929 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 RRAGAQ7L523 313 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 TMC6Q7Z403 805 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.7■□□□□ 0.1
SHANK2-210ENST00000449116 PPM1KQ8N3J5 372 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 ANP32BQ92688 251 aaKnown RBP15.7■□□□□ 0.1
SHANK2-210ENST00000449116 UBE2TQ9NPD8 197 aaPredicted RBP15.7■□□□□ 0.1
SHANK2-210ENST00000449116 ADAM28Q9UKQ2 775 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 POLIQ9UNA4 740 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 RWDD3Q9Y3V2 267 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 SCN1AP35498 2009 aa15.7■□□□□ 0.1
SHANK2-210ENST00000449116 LINC01553A4QN01 128 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 EPHB6O15197 1021 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 TRAPPC3O43617 180 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 LINC00271P0C7V0 271 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 MYOGP15173 224 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 BRCC3P46736 316 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 TRIM14Q14142 442 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 TIGD5Q53EQ6 642 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 IQCEQ6IPM2 695 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 GJB7Q6PEY0 223 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 SCARA5Q6ZMJ2 495 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 ENOSF1Q7L5Y1 443 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 TMEM173Q86WV6 379 aaPredicted RBP15.69■□□□□ 0.1
SHANK2-210ENST00000449116 SLC39A11Q8N1S5 342 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 TOP6BLQ8N6T0 577 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 IGSF21Q96ID5 467 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 SUSD3Q96L08 255 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 SENP8Q96LD8 212 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 MMS19Q96T76 1030 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 NAA15Q9BXJ9 866 aaKnown RBP15.69■□□□□ 0.1
SHANK2-210ENST00000449116 BCO2Q9BYV7 579 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 TTYH3Q9C0H2 523 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 CEP72Q9P209 647 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 DNAJC12Q9UKB3 198 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 PCDHB12Q9Y5F1 795 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 FHOD1Q9Y613 1164 aa15.69■□□□□ 0.1
SHANK2-210ENST00000449116 ARHGEF37A1IGU5 675 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 M0QZQ0 153 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 CYB561D2O14569 222 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 HUS1O60921 280 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 CA3P07451 260 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 PPM1AP35813 382 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 MFAP3P55082 362 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 POLR2FP61218 127 aaKnown RBP15.68■□□□□ 0.1
SHANK2-210ENST00000449116 ELAVL2Q12926 359 aaKnown RBP15.68■□□□□ 0.1
SHANK2-210ENST00000449116 RAB30Q15771 203 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 FUT10Q6P4F1 479 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 DPH6Q7L8W6 267 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 CACNA2D4Q7Z3S7 1137 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 LIMS2Q7Z4I7 341 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 DRC7Q8IY82 874 aa15.68■□□□□ 0.1
SHANK2-210ENST00000449116 APPL2Q8NEU8 664 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms