RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 ZNF516Q92618 1163 aa31.67■■■□□ 2.66
CHCHD4-202ENST00000396914 SENP8Q96LD8 212 aa31.67■■■□□ 2.66
CHCHD4-202ENST00000396914 DUSP9Q99956 384 aaKnown RBP31.67■■■□□ 2.66
CHCHD4-202ENST00000396914 TMEM63CQ9P1W3 806 aa31.67■■■□□ 2.66
CHCHD4-202ENST00000396914 SIX4Q9UIU6 781 aa31.67■■■□□ 2.66
CHCHD4-202ENST00000396914 TIMM13Q9Y5L4 95 aaPredicted RBP31.67■■■□□ 2.66
CHCHD4-202ENST00000396914 REV3LO60673 3130 aa31.67■■■□□ 2.66
CHCHD4-202ENST00000396914 SLC16A3O15427 465 aaKnown RBP31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 LINC01565O15544 149 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 CLASP2O75122 1294 aaKnown RBP31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 ADH1AP07327 375 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 TRIM49P0CI25 452 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 TRIM49CP0CI26 452 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 MYO1EQ12965 1108 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 ANKS3Q6ZW76 656 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 LNX1Q8TBB1 728 aaPredicted RBP31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 CEP63Q96MT8 703 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 RWDD2AQ9UIY3 292 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 FSD2A1L4K1 749 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 KPNA7A9QM74 516 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 TEX28O15482 410 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 ODC1P11926 461 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 NDUFV1P49821 464 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 CCDC40Q4G0X9 1142 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 VARS2Q5ST30 1063 aaKnown RBP31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 SCARA3Q6AZY7 606 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 RBM43Q6ZSC3 357 aaKnown RBP31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 LRRC52Q8N7C0 313 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 EFHBQ8N7U6 833 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 HLA-CQ95604 372 aa31.66■■■□□ 2.66
CHCHD4-202ENST00000396914 ARHGEF37A1IGU5 675 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 M0QZQ0 153 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 CYB561D2O14569 222 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 AARSP49588 968 aaKnown RBP eCLIP31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 TPD52L1Q16890 204 aaPredicted RBP31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 DCAF17Q5H9S7 520 aaPredicted RBP31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 TCERG1LQ5VWI1 586 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 PPFIBP1Q86W92 1011 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 ZC3H3Q8IXZ2 948 aaKnown RBP31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 GPR65Q8IYL9 337 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 PABPC5Q96DU9 382 aaKnown RBP31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 HPDLQ96IR7 371 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 RXFP1Q9HBX9 757 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 PRDM6Q9NQX0 595 aa31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 ARMCX3Q9UH62 379 aaPredicted RBP31.65■■■□□ 2.66
CHCHD4-202ENST00000396914 IKBKBO14920 756 aa31.64■■■□□ 2.66
CHCHD4-202ENST00000396914 FGFR1OPO95684 399 aaKnown RBP31.64■■■□□ 2.66
CHCHD4-202ENST00000396914 SRGAP2BP0DMP2 458 aa31.64■■■□□ 2.66
CHCHD4-202ENST00000396914 RBM10P98175 930 aaKnown RBP31.64■■■□□ 2.66
CHCHD4-202ENST00000396914 PALB2Q86YC2 1186 aa31.64■■■□□ 2.66
CHCHD4-202ENST00000396914 SRRTQ9BXP5 876 aaKnown RBP31.64■■■□□ 2.66
CHCHD4-202ENST00000396914 FNIP2Q9P278 1114 aa31.64■■■□□ 2.66
CHCHD4-202ENST00000396914 VWA8A3KMH1 1905 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 SCN1AP35498 2009 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 H7C4K7 107 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 CLDN10P78369 228 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 YWHAHQ04917 246 aaPredicted RBP31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 CTXN3Q4LDR2 81 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 TDRD10Q5VZ19 366 aaKnown RBP31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 FOXR2Q6PJQ5 311 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 FILIP1Q7Z7B0 1213 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 METTL23Q86XA0 190 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 CREBRFQ8IUR6 639 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 CXorf38Q8TB03 319 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 HCFC2Q9Y5Z7 792 aa31.63■■■□□ 2.65
CHCHD4-202ENST00000396914 SPDYE4A6NLX3 237 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 CST3P01034 146 aaPredicted RBP31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 GCLMP48507 274 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 ARPP19P56211 112 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 ADAM15Q13444 863 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 KLHL40Q2TBA0 621 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 ZNF280DQ6N043 979 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 UBE2ZQ9H832 354 aaPredicted RBP31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 SNX9Q9Y5X1 595 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 CDY1Q9Y6F8 540 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 COL6A3P12111 3177 aa31.62■■■□□ 2.65
CHCHD4-202ENST00000396914 STX10O60499 249 aa31.61■■■□□ 2.65
CHCHD4-202ENST00000396914 C4BPAP04003 597 aaKnown RBP31.61■■■□□ 2.65
CHCHD4-202ENST00000396914 KCNA5P22460 613 aa31.61■■■□□ 2.65
CHCHD4-202ENST00000396914 CLSTN3Q9BQT9 956 aa31.61■■■□□ 2.65
CHCHD4-202ENST00000396914 METTL14Q9HCE5 456 aaKnown RBP31.61■■■□□ 2.65
CHCHD4-202ENST00000396914 MTRRQ9UBK8 725 aa31.61■■■□□ 2.65
CHCHD4-202ENST00000396914 DSEQ9UL01 958 aa31.61■■■□□ 2.65
CHCHD4-202ENST00000396914 COG5Q9UP83 839 aa31.61■■■□□ 2.65
CHCHD4-202ENST00000396914 HUS1O60921 280 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 OR1D2P34982 312 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 NCOA4Q13772 614 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 C1orf220Q5T0J3 134 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 OVOS1Q6IE37 1185 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 SV2AQ7L0J3 742 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 VN1R2Q8NFZ6 395 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 CASP10Q92851 521 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 BORCS6Q96GS4 357 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 ANO10Q9NW15 660 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 BARX2Q9UMQ3 279 aaPredicted RBP31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 BACE2Q9Y5Z0 518 aa31.6■■■□□ 2.65
CHCHD4-202ENST00000396914 GLUD1P00367 558 aa31.59■■■□□ 2.65
CHCHD4-202ENST00000396914 EPCAMP16422 314 aa31.59■■■□□ 2.65
CHCHD4-202ENST00000396914 TYMPP19971 482 aa31.59■■■□□ 2.65
CHCHD4-202ENST00000396914 PIK3CAP42336 1068 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms