RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 IQCEQ6IPM2 695 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 ARMCX5Q6P1M9 558 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 MTSS1LQ765P7 747 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 NT5DC4Q86YG4 428 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 SLC44A3Q8N4M1 653 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 RSAD2Q8WXG1 361 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 FGF13Q92913 245 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 PYM1Q9BRP8 204 aaKnown RBP14.89□□□□□ -0.03
CXCL12-205ENST00000395794 STRA6Q9BX79 667 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 MAGEF1Q9HAY2 307 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 AFF4Q9UHB7 1163 aaKnown RBP14.89□□□□□ -0.03
CXCL12-205ENST00000395794 MRPS23Q9Y3D9 190 aaKnown RBP14.89□□□□□ -0.03
CXCL12-205ENST00000395794 TIMM13Q9Y5L4 95 aaPredicted RBP14.89□□□□□ -0.03
CXCL12-205ENST00000395794 DENND4AQ7Z401 1863 aa14.89□□□□□ -0.03
CXCL12-205ENST00000395794 STK25O00506 426 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 PDGFBP01127 241 aaPredicted RBP14.88□□□□□ -0.03
CXCL12-205ENST00000395794 SRFP11831 508 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 TYMPP19971 482 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 GARTP22102 1010 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 AARSP49588 968 aaKnown RBP eCLIP14.88□□□□□ -0.03
CXCL12-205ENST00000395794 NUBP1P53384 320 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 PTPN5P54829 565 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 ASIC1P78348 528 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 ADCY1Q08828 1119 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 KCNA1Q09470 495 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 CYP4A22Q5TCH4 519 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 OVOS1Q6IE37 1185 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 SHC4Q6S5L8 630 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 METTL23Q86XA0 190 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 FLCNQ8NFG4 579 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 NOC3LQ8WTT2 800 aaKnown RBP14.88□□□□□ -0.03
CXCL12-205ENST00000395794 CACTINQ8WUQ7 758 aaKnown RBP14.88□□□□□ -0.03
CXCL12-205ENST00000395794 ZNF512Q96ME7 567 aaPredicted RBP14.88□□□□□ -0.03
CXCL12-205ENST00000395794 IRF2BPLQ9H1B7 796 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 KBTBD4Q9NVX7 518 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 HCFC1R1Q9NWW0 138 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 DPP3Q9NY33 737 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 DNMT3BQ9UBC3 853 aaKnown RBP14.88□□□□□ -0.03
CXCL12-205ENST00000395794 WNT16Q9UBV4 365 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 DSEQ9UL01 958 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 INSL5Q9Y5Q6 135 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 NUMBLQ9Y6R0 609 aa14.88□□□□□ -0.03
CXCL12-205ENST00000395794 TECTAO75443 2155 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 CITO14578 2027 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 ANHXE9PGG2 379 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 PIRO00625 290 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 ZNF197O14709 1029 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 KIAA0391O15091 583 aaKnown RBP14.87□□□□□ -0.03
CXCL12-205ENST00000395794 POLR2DO15514 142 aaKnown RBP14.87□□□□□ -0.03
CXCL12-205ENST00000395794 RHOP08100 348 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 CFHP08603 1231 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 ADSSP30520 456 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 CLCN5P51795 746 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 CASP5P51878 434 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 VCPP55072 806 aaKnown RBP14.87□□□□□ -0.03
CXCL12-205ENST00000395794 TFAMQ00059 246 aaKnown RBP14.87□□□□□ -0.03
CXCL12-205ENST00000395794 PLD1Q13393 1074 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 HTR4Q13639 388 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 E2F4Q16254 413 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 IER5LQ5T953 404 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 ASTLQ6HA08 431 aaPredicted RBP14.87□□□□□ -0.03
CXCL12-205ENST00000395794 PDZD4Q76G19 769 aaPredicted RBP14.87□□□□□ -0.03
CXCL12-205ENST00000395794 SIX5Q8N196 739 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 ITFG1Q8TB96 612 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 SAAL1Q96ER3 474 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 SENP8Q96LD8 212 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 CORO1BQ9BR76 489 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 TRIM9Q9C026 710 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 IKZF4Q9H2S9 585 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 RBAKQ9NYW8 714 aaPredicted RBP14.87□□□□□ -0.03
CXCL12-205ENST00000395794 R3HCC1Q9Y3T6 440 aaKnown RBP14.87□□□□□ -0.03
CXCL12-205ENST00000395794 C2orf16Q68DN1 1984 aa14.87□□□□□ -0.03
CXCL12-205ENST00000395794 MTCL1Q9Y4B5 1905 aaKnown RBP14.86□□□□□ -0.03
CXCL12-205ENST00000395794 ANO9A1A5B4 782 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 PPEF2O14830 753 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 NARSO43776 548 aaKnown RBP14.86□□□□□ -0.03
CXCL12-205ENST00000395794 EXTL3O43909 919 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 PRPF6O94906 941 aaKnown RBP14.86□□□□□ -0.03
CXCL12-205ENST00000395794 SEC24AO95486 1093 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 PNPLA4P41247 253 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 TAF6P49848 677 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 MYBPC2Q14324 1141 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 SV2CQ496J9 727 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 CRELD2Q6UXH1 353 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-205ENST00000395794 RNF19BQ6ZMZ0 732 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 CEP57L1Q8IYX8 460 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 THEM5Q8N1Q8 247 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 TMEM130Q8N3G9 435 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 ZNF560Q96MR9 790 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 AVENQ9NQS1 362 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-205ENST00000395794 GDE1Q9NZC3 331 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 PCDHA7Q9UN72 937 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 VWA8A3KMH1 1905 aa14.86□□□□□ -0.03
CXCL12-205ENST00000395794 TRIP11Q15643 1979 aa14.85□□□□□ -0.03
CXCL12-205ENST00000395794 CYB561D2O14569 222 aa14.85□□□□□ -0.03
CXCL12-205ENST00000395794 ALDH1A3P47895 512 aa14.85□□□□□ -0.03
CXCL12-205ENST00000395794 NHLH1Q02575 133 aa14.85□□□□□ -0.03
CXCL12-205ENST00000395794 DNM1Q05193 864 aaKnown RBP14.85□□□□□ -0.03
CXCL12-205ENST00000395794 TWF1Q12792 350 aa14.85□□□□□ -0.03
CXCL12-205ENST00000395794 GPR17Q13304 367 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms