RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PIDD1Q9HB75 910 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 STX4Q12846 297 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 ELMO2Q96JJ3 720 aa15.41■□□□□ 0.06
CCDC50-201ENST00000392455 MYO18AQ92614 2054 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 KPNA4O00629 521 aaPredicted RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 CNOT3O75175 753 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 SRP72O76094 671 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 KLHL18O94889 574 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 GPS1Q13098 491 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 ZMYND11Q15326 602 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 PDZK1Q5T2W1 519 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 PCDHB6Q9Y5E3 794 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 MEI4A8MW99 385 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 S100A1P23297 94 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 NFIAQ12857 509 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 CDC73Q6P1J9 531 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 PIGOQ8TEQ8 1089 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 MCRS1Q96EZ8 462 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 ATAD3AQ9NVI7 634 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 KDM5DQ9BY66 1539 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 SH3BP5LQ7L8J4 393 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 PARD6BQ9BYG5 372 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 LSM7Q9UK45 103 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 ARIH1Q9Y4X5 557 aaPredicted RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 KIAA0391O15091 583 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 CENPAP49450 140 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 ALKBH5Q6P6C2 394 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 ATP6V1G3Q96LB4 118 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 CHP2O43745 196 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 MED26O95402 600 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 KCNK10P57789 538 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 PTK6Q13882 451 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 MRPL39Q9NYK5 338 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 STAP2Q9UGK3 403 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 PRAMEF22A3QJZ6 481 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 PI4K2BG5E9Z4 385 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 TEX46H3BTG2 121 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 DARSP14868 501 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 DSG1Q02413 1049 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 STILQ15468 1287 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 TSNQ15631 228 aaKnown RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 TTC23Q5W5X9 447 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 NLRP10Q86W26 655 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
CCDC50-201ENST00000392455 MYL2P10916 166 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 VCLP18206 1134 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 TTLL9Q3SXZ7 439 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 CACHD1Q5VU97 1274 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 TAS2R42Q7RTR8 314 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 INPP5DQ92835 1189 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 RNFT2Q96EX2 444 aa15.4■□□□□ 0.06
CCDC50-201ENST00000392455 ZNF772Q68DY9 489 aaPredicted RBP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 PI16Q6UXB8 463 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 RFT1Q96AA3 541 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 TMEM237Q96Q45 408 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CLDN3O15551 220 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 SCP2P22307 547 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CC2D1AQ6P1N0 951 aaPredicted RBP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 NEK5Q6P3R8 708 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CCDC36Q8IYA8 594 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 AFG1LQ8WV93 481 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CYP4F11Q9HBI6 524 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 SLC9A2Q9UBY0 812 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 NDUFS3O75489 264 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 PLA2G4AP47712 749 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CDK17Q00537 523 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 DCTN2Q13561 401 aaKnown RBP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 SNX17Q15036 470 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 RMND5AQ9H871 391 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 EFCAB6Q5THR3 1501 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 UBA6A0AVT1 1052 aaPredicted RBP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CDH16O75309 829 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 C3orf70A6NLC5 250 aaPredicted RBP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CATSPER4Q7RTX7 472 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 GDAQ9Y2T3 454 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 PNMA6AP0CW24 399 aaPredicted RBP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CCDC166P0CW27 439 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 BYSLQ13895 437 aaKnown RBP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 TAF2Q6P1X5 1199 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CNDP1Q96KN2 507 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 MTIF3Q9H2K0 278 aaKnown RBP15.39■□□□□ 0.05
CCDC50-201ENST00000392455 UNC45AQ9H3U1 944 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 DCTN4Q9UJW0 460 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 CDC42BPGQ6DT37 1551 aa15.39■□□□□ 0.05
CCDC50-201ENST00000392455 XPO1O14980 1071 aaKnown RBP15.38■□□□□ 0.05
CCDC50-201ENST00000392455 BCAR1P56945 870 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 MAPK6Q16659 721 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 WDR36Q8NI36 951 aaKnown RBP15.38■□□□□ 0.05
CCDC50-201ENST00000392455 NARS2Q96I59 477 aaKnown RBP15.38■□□□□ 0.05
CCDC50-201ENST00000392455 HEY1Q9Y5J3 304 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 NFX1Q12986 1120 aaKnown RBP15.38■□□□□ 0.05
CCDC50-201ENST00000392455 POP5Q969H6 163 aaKnown RBP15.38■□□□□ 0.05
CCDC50-201ENST00000392455 ZNF560Q96MR9 790 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 FHOD1Q9Y613 1164 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 SLC26A4O43511 780 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 AGTP01019 485 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 IFNGR2P38484 337 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 MTMR1Q13613 665 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 ZNF394Q53GI3 561 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms