RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 DLEC1Q9Y238 1755 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 A0A0G2JND7 137 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 FUOMA2VDF0 154 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 NDC80O14777 642 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 THAP12O43422 761 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 ZBED1O96006 694 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 CD48P09326 243 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 PON1P27169 355 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 PHKA1P46020 1223 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 HIRAP54198 1017 aaPredicted RBP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 CALCOCO2Q13137 446 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 NONOQ15233 471 aaKnown RBP eCLIP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 TMED2Q15363 201 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 SLC15A2Q16348 729 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 TRMT5Q32P41 509 aaKnown RBP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 MMEL1Q495T6 779 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 PACS1Q6VY07 963 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 KIF6Q6ZMV9 814 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 SV2BQ7L1I2 683 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 GPKOWQ92917 476 aaPredicted RBP eCLIP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 WHRNQ9P202 907 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 CEPT1Q9Y6K0 416 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 SYNGAP1Q96PV0 1343 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 BRWD3Q6RI45 1802 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 A0A1W2PRG0 241 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 TYROBPO43914 113 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 TFPTP0C1Z6 253 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 CDH2P19022 906 aaPredicted RBP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 ABCB4P21439 1286 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 PEX2P28328 305 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 MYH11P35749 1972 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 TLR1Q15399 786 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 KCTD21Q4G0X4 260 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 TMC7Q7Z402 723 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 DHDDSQ86SQ9 333 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 ULK2Q8IYT8 1036 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 ARHGAP24Q8N264 748 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 RBM15BQ8NDT2 890 aaKnown RBP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 PPP4R1Q8TF05 950 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 TSG101Q99816 390 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 EIF2AQ9BY44 585 aaKnown RBP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 OSBPL8Q9BZF1 889 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 GPAMQ9HCL2 828 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 ANKFY1Q9P2R3 1169 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 TRIM17Q9Y577 477 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 ALG6Q9Y672 507 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 C2orf71A6NGG8 1288 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 LAD1O00515 517 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 ZBED4O75132 1171 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TM7SF2O76062 418 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TMEM253P0C7T8 217 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TECP42680 631 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 NR1H3Q13133 447 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 RASGRF1Q13972 1273 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 CLUL1Q15846 466 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 DHRS4L2Q6PKH6 230 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 PASD1Q8IV76 773 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 CROCCP3Q8IVE0 287 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 C4orf33Q8N1A6 199 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 SYT2Q8N9I0 419 aaPredicted RBP10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TRAIPQ9BWF2 469 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TPK1Q9H3S4 243 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 KIAA1586Q9HCI6 787 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 SIX2Q9NPC8 291 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 ARMCX1Q9P291 453 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 NUP188Q5SRE5 1749 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 B2RBV5 119 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 HSPA6P17066 643 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 ANXA13P27216 316 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 PIK3CAP42336 1068 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 FOLH1Q04609 750 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TMEM214Q6NUQ4 689 aaKnown RBP10.08□□□□□ -0.8
SF3A3-201ENST00000373019 GJB7Q6PEY0 223 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 BORAQ6PGQ7 559 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 GLYCTKQ8IVS8 523 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 SDR16C5Q8N3Y7 309 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 RNF41Q9H4P4 317 aaPredicted RBP10.08□□□□□ -0.8
SF3A3-201ENST00000373019 C17orf75Q9HAS0 396 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TRPC7Q9HCX4 862 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 DOCK2Q92608 1830 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 DKC1O60832 514 aaKnown RBP eCLIP10.08□□□□□ -0.8
SF3A3-201ENST00000373019 GYS1P13807 737 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 CRKLP46109 303 aaKnown RBP10.08□□□□□ -0.8
SF3A3-201ENST00000373019 ENTPD1P49961 510 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 MYBPC2Q14324 1141 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 PKN2Q16513 984 aaKnown RBP10.08□□□□□ -0.8
SF3A3-201ENST00000373019 SYCP2LQ5T4T6 812 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 C6orf183Q5T699 404 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 C14orf80Q86SX3 495 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TMPRSS6Q8IU80 811 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 SLC7A5P1Q8MH63 180 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 SCAIQ8N9R8 606 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 SPATA5Q8NB90 893 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 PIP4K2CQ8TBX8 421 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 PYDC1Q8WXC3 89 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 CEP63Q96MT8 703 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TTC25Q96NG3 672 aa10.08□□□□□ -0.8
SF3A3-201ENST00000373019 TCHPQ9BT92 498 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms