RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR55, Length 98 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR55	snR55	GPM1	P00950	247 aa	Known RBP	4.25	□□□□□ -1.73
snR55	snR55	YCK2	P23292	546 aa	Known RBP	4.25	□□□□□ -1.73
snR55	snR55	YDJ1	P25491	409 aa	Known RBP	4.25	□□□□□ -1.73
snR55	snR55	GUA1	P38625	525 aa	Known RBP	4.25	□□□□□ -1.73
snR55	snR55	JJJ2	P46997	583 aa		4.25	□□□□□ -1.73
snR55	snR55	YMR187C	Q03236	431 aa		4.25	□□□□□ -1.73
snR55	snR55	MCX1	P38323	520 aa	Predicted RBP	4.24	□□□□□ -1.73
snR55	snR55	SLX8	P40072	274 aa		4.24	□□□□□ -1.73
snR55	snR55	SPT5	P27692	1063 aa	Known RBP	4.23	□□□□□ -1.73
snR55	snR55	IRE1	P32361	1115 aa		4.22	□□□□□ -1.73
snR55	snR55	TBS1	P38114	1094 aa		4.22	□□□□□ -1.73
snR55	snR55	YNR014W	P53719	212 aa		4.22	□□□□□ -1.73
snR55	snR55	PSH1	Q12161	406 aa		4.22	□□□□□ -1.73
snR55	snR55	YDR215C	Q12240	137 aa		4.22	□□□□□ -1.73
snR55	snR55	PDC6	P26263	563 aa	Known RBP	4.21	□□□□□ -1.74
snR55	snR55	HDA3	Q06623	655 aa		4.21	□□□□□ -1.74
snR55	snR55	SBP1	P10080	294 aa	Known RBP	4.2	□□□□□ -1.74
snR55	snR55	FPS1	P23900	669 aa		4.2	□□□□□ -1.74
snR55	snR55	MRPL16	P38064	232 aa		4.2	□□□□□ -1.74
snR55	snR55	YBL036C	P38197	257 aa		4.2	□□□□□ -1.74
snR55	snR55	SOH1	P38633	127 aa		4.2	□□□□□ -1.74
snR55	snR55	SLN1	P39928	1220 aa	Predicted RBP	4.2	□□□□□ -1.74
snR55	snR55	ALA1	P40825	983 aa	Known RBP	4.2	□□□□□ -1.74
snR55	snR55	UTP13	Q05946	817 aa	Known RBP	4.2	□□□□□ -1.74
snR55	snR55	YPQ2	Q06328	317 aa		4.2	□□□□□ -1.74
snR55	snR55	RPS31	P05759	152 aa	Known RBP	4.19	□□□□□ -1.74
snR55	snR55	BIO2	P32451	375 aa		4.19	□□□□□ -1.74
snR55	snR55	BOI2	P39969	1040 aa		4.19	□□□□□ -1.74
snR55	snR55	PDC5	P16467	563 aa	Known RBP	4.18	□□□□□ -1.74
snR55	snR55	AMN1	P38285	549 aa	Predicted RBP	4.18	□□□□□ -1.74
snR55	snR55	SPR3	P41901	512 aa		4.18	□□□□□ -1.74
snR55	snR55	HPC2	Q01448	625 aa		4.18	□□□□□ -1.74
snR55	snR55	TY1A-DR2	Q03964	440 aa	Known RBP	4.18	□□□□□ -1.74
snR55	snR55	MCA1	Q08601	432 aa		4.18	□□□□□ -1.74
snR55	snR55	STB3	Q12427	513 aa		4.18	□□□□□ -1.74
snR55	snR55	LEU3	P08638	886 aa		4.17	□□□□□ -1.74
snR55	snR55	PKC1	P24583	1151 aa		4.17	□□□□□ -1.74
snR55	snR55	KNS1	P32350	737 aa	Predicted RBP	4.17	□□□□□ -1.74
snR55	snR55	ENO2	P00925	437 aa	Known RBP	4.16	□□□□□ -1.74
snR55	snR55	SUP45	P12385	437 aa	Known RBP	4.16	□□□□□ -1.74
snR55	snR55	MSC7	P38694	644 aa		4.16	□□□□□ -1.74
snR55	snR55	ALD2	P47771	506 aa		4.16	□□□□□ -1.74
snR55	snR55	TFB3	Q03290	321 aa		4.16	□□□□□ -1.74
snR55	snR55	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
snR55	snR55	LEU1	P07264	779 aa	Known RBP	4.15	□□□□□ -1.75
snR55	snR55	SWI5	P08153	709 aa		4.15	□□□□□ -1.75
snR55	snR55	RDS2	P19541	446 aa	Known RBP	4.15	□□□□□ -1.75
snR55	snR55	ATG3	P40344	310 aa		4.15	□□□□□ -1.75
snR55	snR55	YNL165W	P53891	406 aa		4.15	□□□□□ -1.75
snR55	snR55	YPP1	P46951	817 aa		4.14	□□□□□ -1.75
snR55	snR55	MET1	P36150	593 aa		4.13	□□□□□ -1.75
snR55	snR55	BRL1	P38770	471 aa		4.13	□□□□□ -1.75
snR55	snR55	LSB6	P42951	607 aa		4.13	□□□□□ -1.75
snR55	snR55	RIM21	P48565	533 aa		4.13	□□□□□ -1.75
snR55	snR55	PRY1	P47032	299 aa		4.12	□□□□□ -1.75
snR55	snR55	YNL108C	P53929	270 aa		4.12	□□□□□ -1.75
snR55	snR55	RGP1	P16664	663 aa		4.11	□□□□□ -1.75
snR55	snR55	TAT1	P38085	619 aa		4.11	□□□□□ -1.75
snR55	snR55	RPN1	P38764	993 aa	Known RBP	4.11	□□□□□ -1.75
snR55	snR55	AIM9	P40053	627 aa	Known RBP	4.11	□□□□□ -1.75
snR55	snR55	RPS6A	P0CX37	236 aa	Known RBP	4.1	□□□□□ -1.75
snR55	snR55	RPS6B	P0CX38	236 aa	Predicted RBP	4.1	□□□□□ -1.75
snR55	snR55	MCM1	P11746	286 aa		4.1	□□□□□ -1.75
snR55	snR55	MLF3	P32047	452 aa		4.08	□□□□□ -1.76
snR55	snR55	YPL034W	Q03083	165 aa		4.08	□□□□□ -1.76
snR55	snR55	NTH2	P35172	780 aa		4.06	□□□□□ -1.76
snR55	snR55	TPS3	P38426	1054 aa	Known RBP	4.06	□□□□□ -1.76
snR55	snR55	MRX10	Q05648	414 aa		4.06	□□□□□ -1.76
snR55	snR55	GLT1	Q12680	2145 aa	Known RBP	4.06	□□□□□ -1.76
snR55	snR55	PGM2	P37012	569 aa	Known RBP	4.05	□□□□□ -1.76
snR55	snR55	PRK1	P40494	810 aa		4.05	□□□□□ -1.76
snR55	snR55	BUD9	P53226	547 aa		4.05	□□□□□ -1.76
snR55	snR55	Q0182	Q9ZZW1	134 aa		4.05	□□□□□ -1.76
snR55	snR55	PDI1	P17967	522 aa	Known RBP	4.04	□□□□□ -1.76
snR55	snR55	MAC1	P35192	417 aa		4.04	□□□□□ -1.76
snR55	snR55	YTA6	P40328	754 aa		4.04	□□□□□ -1.76
snR55	snR55	ALO1	P54783	526 aa	Known RBP	4.04	□□□□□ -1.76
snR55	snR55	ENO1	P00924	437 aa	Known RBP	4.03	□□□□□ -1.76
snR55	snR55	RPP1A	P05318	106 aa	Predicted RBP	4.03	□□□□□ -1.76
snR55	snR55	NAR1	P23503	491 aa	Known RBP	4.03	□□□□□ -1.76
snR55	snR55	ALG14	P38242	237 aa		4.03	□□□□□ -1.76
snR55	snR55	YFL034W	P43564	1073 aa		4.03	□□□□□ -1.76
snR55	snR55	INP52	P50942	1183 aa		4.03	□□□□□ -1.76
snR55	snR55	NHA1	Q99271	985 aa		4.03	□□□□□ -1.76
snR55	snR55	PGM1	P33401	570 aa	Known RBP	4.02	□□□□□ -1.77
snR55	snR55	YJL007C	P47080	104 aa		4.02	□□□□□ -1.77
snR55	snR55	SKP1	P52286	194 aa		4.02	□□□□□ -1.77
snR55	snR55	HEH2	Q03281	663 aa		4.02	□□□□□ -1.77
snR55	snR55	GIS4	Q04233	774 aa		4.02	□□□□□ -1.77
snR55	snR55	TSC13	Q99190	310 aa		4.02	□□□□□ -1.77
snR55	snR55	CYT1	P07143	309 aa		4.01	□□□□□ -1.77
snR55	snR55	PEP12	P32854	288 aa		4.01	□□□□□ -1.77
snR55	snR55	GAS5	Q08193	484 aa		4.01	□□□□□ -1.77
snR55	snR55	AI3	P03877	415 aa		4	□□□□□ -1.77
snR55	snR55	MTO1	P53070	669 aa		4	□□□□□ -1.77
snR55	snR55	OMA1	P36163	345 aa		3.99	□□□□□ -1.77
snR55	snR55	ATG32	P40458	529 aa		3.99	□□□□□ -1.77
snR55	snR55	YNR040W	P53736	256 aa		3.99	□□□□□ -1.77
snR55	snR55	CUS1	Q02554	436 aa	Predicted RBP	3.99	□□□□□ -1.77
snR55	snR55	UTP4	Q06679	776 aa	Known RBP	3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms