RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W IRE1P32361 1115 aa1.68□□□□□ -2.14
RDS3YPR094W MET1P36150 593 aa1.68□□□□□ -2.14
RDS3YPR094W AHP1P38013 176 aaKnown RBP1.68□□□□□ -2.14
RDS3YPR094W MRPL16P38064 232 aa1.68□□□□□ -2.14
RDS3YPR094W UTP7P40055 554 aaKnown RBP1.68□□□□□ -2.14
RDS3YPR094W RPP2BP02400 110 aaKnown RBP1.67□□□□□ -2.14
RDS3YPR094W SPT2P06843 333 aaPredicted RBP1.67□□□□□ -2.14
RDS3YPR094W OMA1P36163 345 aa1.67□□□□□ -2.14
RDS3YPR094W JJJ2P46997 583 aa1.67□□□□□ -2.14
RDS3YPR094W CSN12P47130 423 aa1.67□□□□□ -2.14
RDS3YPR094W FRA1Q07825 749 aa1.67□□□□□ -2.14
RDS3YPR094W PSH1Q12161 406 aa1.67□□□□□ -2.14
RDS3YPR094W MAK16P10962 306 aaPredicted RBP1.66□□□□□ -2.14
RDS3YPR094W PDC6P26263 563 aaKnown RBP1.66□□□□□ -2.14
RDS3YPR094W UTR2P32623 467 aa1.66□□□□□ -2.14
RDS3YPR094W HAL5P38970 855 aaKnown RBP1.66□□□□□ -2.14
RDS3YPR094W ALA1P40825 983 aaKnown RBP1.66□□□□□ -2.14
RDS3YPR094W SPR3P41901 512 aa1.66□□□□□ -2.14
RDS3YPR094W SUM1P46676 1062 aa1.66□□□□□ -2.14
RDS3YPR094W STE20Q03497 939 aaKnown RBP1.66□□□□□ -2.14
RDS3YPR094W TY1A-DR2Q03964 440 aaKnown RBP1.66□□□□□ -2.14
RDS3YPR094W ISR1Q06098 443 aaKnown RBP1.66□□□□□ -2.14
RDS3YPR094W STB3Q12427 513 aa1.66□□□□□ -2.14
RDS3YPR094W RPS31P05759 152 aaKnown RBP1.65□□□□□ -2.15
RDS3YPR094W ISF1P32488 338 aa1.65□□□□□ -2.15
RDS3YPR094W MSC7P38694 644 aa1.65□□□□□ -2.15
RDS3YPR094W APL6P46682 809 aa1.65□□□□□ -2.15
RDS3YPR094W AVT1P47082 602 aa1.65□□□□□ -2.15
RDS3YPR094W BUD9P53226 547 aa1.65□□□□□ -2.15
RDS3YPR094W YNR021WP53723 404 aaKnown RBP1.65□□□□□ -2.15
RDS3YPR094W SLX8P40072 274 aa1.64□□□□□ -2.15
RDS3YPR094W EMP47P43555 445 aa1.64□□□□□ -2.15
RDS3YPR094W TBS1P38114 1094 aa1.63□□□□□ -2.15
RDS3YPR094W TPS3P38426 1054 aaKnown RBP1.63□□□□□ -2.15
RDS3YPR094W GAS5Q08193 484 aa1.63□□□□□ -2.15
RDS3YPR094W TRP3P00937 484 aa1.62□□□□□ -2.15
RDS3YPR094W LEU1P07264 779 aaKnown RBP1.62□□□□□ -2.15
RDS3YPR094W PGM1P33401 570 aaKnown RBP1.62□□□□□ -2.15
RDS3YPR094W PGM2P37012 569 aaKnown RBP1.62□□□□□ -2.15
RDS3YPR094W ALD2P47771 506 aa1.62□□□□□ -2.15
RDS3YPR094W YNL165WP53891 406 aa1.62□□□□□ -2.15
RDS3YPR094W GIS1Q03833 894 aa1.62□□□□□ -2.15
RDS3YPR094W HDA3Q06623 655 aa1.62□□□□□ -2.15
RDS3YPR094W AIM7Q12156 149 aa1.62□□□□□ -2.15
RDS3YPR094W AI3P03877 415 aa1.61□□□□□ -2.15
RDS3YPR094W YKR073CP36153 106 aa1.61□□□□□ -2.15
RDS3YPR094W ALG14P38242 237 aa1.61□□□□□ -2.15
RDS3YPR094W CTH1P47976 325 aa1.61□□□□□ -2.15
RDS3YPR094W YPQ2Q06328 317 aa1.61□□□□□ -2.15
RDS3YPR094W MCM16Q12262 181 aa1.61□□□□□ -2.15
RDS3YPR094W NHA1Q99271 985 aa1.61□□□□□ -2.15
RDS3YPR094W RGP1P16664 663 aa1.6□□□□□ -2.15
RDS3YPR094W SAC7P17121 654 aa1.6□□□□□ -2.15
RDS3YPR094W NAR1P23503 491 aaKnown RBP1.6□□□□□ -2.15
RDS3YPR094W YDJ1P25491 409 aaKnown RBP1.6□□□□□ -2.15
RDS3YPR094W SOH1P38633 127 aa1.6□□□□□ -2.15
RDS3YPR094W PRK1P40494 810 aa1.6□□□□□ -2.15
RDS3YPR094W MRX12P47084 519 aa1.6□□□□□ -2.15
RDS3YPR094W HPC2Q01448 625 aa1.6□□□□□ -2.15
RDS3YPR094W AOS1Q06624 347 aa1.6□□□□□ -2.15
RDS3YPR094W SWI5P08153 709 aa1.59□□□□□ -2.15
RDS3YPR094W DMA1P38823 416 aa1.59□□□□□ -2.15
RDS3YPR094W GIS4Q04233 774 aa1.59□□□□□ -2.15
RDS3YPR094W MED7Q08278 222 aa1.59□□□□□ -2.15
RDS3YPR094W CBC2Q08920 208 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15 RIP-Chip
RDS3YPR094W YLR122CQ12312 125 aa1.59□□□□□ -2.15
RDS3YPR094W ELM1P32801 640 aa1.58□□□□□ -2.16
RDS3YPR094W LIP5P32875 414 aa1.58□□□□□ -2.16
RDS3YPR094W TOS1P38288 455 aa1.58□□□□□ -2.16
RDS3YPR094W RRM3P38766 723 aa1.58□□□□□ -2.16
RDS3YPR094W ARI1P53111 347 aaKnown RBP1.58□□□□□ -2.16
RDS3YPR094W MRP10O75012 95 aa1.57□□□□□ -2.16
RDS3YPR094W SSA2P10592 639 aaKnown RBP1.57□□□□□ -2.16
RDS3YPR094W MLF3P32047 452 aa1.57□□□□□ -2.16
RDS3YPR094W COQ2P32378 372 aa1.57□□□□□ -2.16
RDS3YPR094W PUB1P32588 453 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
RDS3YPR094W SFA1P32771 386 aa1.57□□□□□ -2.16
RDS3YPR094W NGR1P32831 672 aaKnown RBP1.57□□□□□ -2.16
RDS3YPR094W CSE4P36012 229 aa1.57□□□□□ -2.16
RDS3YPR094W KAE1P36132 386 aa1.57□□□□□ -2.16
RDS3YPR094W HEH2Q03281 663 aa1.57□□□□□ -2.16
RDS3YPR094W BRE4Q07660 1125 aa1.57□□□□□ -2.16
RDS3YPR094W RPS6AP0CX37 236 aaKnown RBP1.56□□□□□ -2.16
RDS3YPR094W RPS6BP0CX38 236 aaPredicted RBP1.56□□□□□ -2.16
RDS3YPR094W RNQ1P25367 405 aa1.56□□□□□ -2.16
RDS3YPR094W UBP5P39944 805 aa1.56□□□□□ -2.16
RDS3YPR094W YGR130CP53278 816 aa1.56□□□□□ -2.16
RDS3YPR094W YNR040WP53736 256 aa1.56□□□□□ -2.16
RDS3YPR094W TFB3Q03290 321 aa1.56□□□□□ -2.16
RDS3YPR094W UTP13Q05946 817 aaKnown RBP1.56□□□□□ -2.16
RDS3YPR094W Q0182Q9ZZW1 134 aa1.56□□□□□ -2.16
RDS3YPR094W RPP1AP05318 106 aaPredicted RBP1.55□□□□□ -2.16
RDS3YPR094W MCM1P11746 286 aa1.55□□□□□ -2.16
RDS3YPR094W SPT5P27692 1063 aaKnown RBP1.55□□□□□ -2.16
RDS3YPR094W NAM7P30771 971 aaKnown RBP1.55□□□□□ -2.16
RDS3YPR094W NTH2P35172 780 aa1.55□□□□□ -2.16
RDS3YPR094W SEA4P38164 1038 aa1.55□□□□□ -2.16
RDS3YPR094W SAF1P38352 637 aa1.55□□□□□ -2.16
RDS3YPR094W AIM9P40053 627 aaKnown RBP1.55□□□□□ -2.16
RDS3YPR094W YTA6P40328 754 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms