RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	JJJ3	P47138	172 aa		5.11	□□□□□ -1.59
YPR039W	YPR039W	UBP15	P50101	1230 aa		5.11	□□□□□ -1.59
YPR039W	YPR039W	MTC5	Q03897	1148 aa		5.11	□□□□□ -1.59
YPR039W	YPR039W	UTP13	Q05946	817 aa	Known RBP	5.11	□□□□□ -1.59
YPR039W	YPR039W	YPR204W	Q08995	1032 aa		5.11	□□□□□ -1.59
YPR039W	YPR039W	ENO1	P00924	437 aa	Known RBP	5.1	□□□□□ -1.59
YPR039W	YPR039W	TIF1	P10081	395 aa	Known RBP	5.1	□□□□□ -1.59
YPR039W	YPR039W	CEM1	P39525	442 aa		5.1	□□□□□ -1.59
YPR039W	YPR039W	ATG3	P40344	310 aa		5.1	□□□□□ -1.59
YPR039W	YPR039W	YMR265C	Q03508	461 aa	Known RBP	5.1	□□□□□ -1.59
YPR039W	YPR039W	DIT1	P21623	536 aa		5.09	□□□□□ -1.59
YPR039W	YPR039W	RTG2	P32608	588 aa	Known RBP	5.09	□□□□□ -1.59
YPR039W	YPR039W	SHM1	P37292	490 aa	Predicted RBP	5.09	□□□□□ -1.59
YPR039W	YPR039W	AHP1	P38013	176 aa	Known RBP	5.09	□□□□□ -1.59
YPR039W	YPR039W	SWI5	P08153	709 aa		5.08	□□□□□ -1.6
YPR039W	YPR039W	KRE33	P53914	1056 aa	Known RBP	5.08	□□□□□ -1.6
YPR039W	YPR039W	ADE12	P80210	433 aa	Known RBP	5.08	□□□□□ -1.6
YPR039W	YPR039W	MRX10	Q05648	414 aa		5.08	□□□□□ -1.6
YPR039W	YPR039W	THI72	Q08579	599 aa		5.08	□□□□□ -1.6
YPR039W	YPR039W	IRE1	P32361	1115 aa		5.07	□□□□□ -1.6
YPR039W	YPR039W	ICP55	P40051	511 aa		5.07	□□□□□ -1.6
YPR039W	YPR039W	JJJ2	P46997	583 aa		5.07	□□□□□ -1.6
YPR039W	YPR039W	SYT1	Q06836	1226 aa		5.07	□□□□□ -1.6
YPR039W	YPR039W	PDI1	P17967	522 aa	Known RBP	5.06	□□□□□ -1.6
YPR039W	YPR039W	AIM9	P40053	627 aa	Known RBP	5.06	□□□□□ -1.6
YPR039W	YPR039W	LEO1	P38439	464 aa		5.05	□□□□□ -1.6
YPR039W	YPR039W	NSG2	P53898	299 aa		5.05	□□□□□ -1.6
YPR039W	YPR039W	RPS31	P05759	152 aa	Known RBP	5.04	□□□□□ -1.6
YPR039W	YPR039W	NTH2	P35172	780 aa		5.04	□□□□□ -1.6
YPR039W	YPR039W	RPL34B	P40525	121 aa	Known RBP	5.04	□□□□□ -1.6
YPR039W	YPR039W	YFL066C	P43538	392 aa		5.04	□□□□□ -1.6
YPR039W	YPR039W	YPQ2	Q06328	317 aa		5.04	□□□□□ -1.6
YPR039W	YPR039W	PSH1	Q12161	406 aa		5.04	□□□□□ -1.6
YPR039W	YPR039W	RPS6A	P0CX37	236 aa	Known RBP	5.03	□□□□□ -1.6
YPR039W	YPR039W	RPS6B	P0CX38	236 aa	Predicted RBP	5.03	□□□□□ -1.6
YPR039W	YPR039W	PDC6	P26263	563 aa	Known RBP	5.03	□□□□□ -1.6
YPR039W	YPR039W	KTR7	P40504	517 aa		5.03	□□□□□ -1.6
YPR039W	YPR039W	YNL165W	P53891	406 aa		5.03	□□□□□ -1.6
YPR039W	YPR039W	PUS1	Q12211	544 aa	Known RBP	5.03	□□□□□ -1.6
YPR039W	YPR039W	AI1	P03875	834 aa		5.02	□□□□□ -1.61
YPR039W	YPR039W	MRPL16	P38064	232 aa		5.02	□□□□□ -1.61
YPR039W	YPR039W	SBE2	P42223	864 aa	Known RBP	5.02	□□□□□ -1.61
YPR039W	YPR039W	PHM7	Q12252	991 aa		5.01	□□□□□ -1.61
YPR039W	YPR039W	YDR461C-A	Q2V2P7	80 aa		5.01	□□□□□ -1.61
YPR039W	YPR039W	PEP12	P32854	288 aa		5	□□□□□ -1.61
YPR039W	YPR039W	LSB3	P43603	459 aa	Known RBP	5	□□□□□ -1.61
YPR039W	YPR039W	STB3	Q12427	513 aa		5	□□□□□ -1.61
YPR039W	YPR039W	TSC13	Q99190	310 aa		4.99	□□□□□ -1.61
YPR039W	YPR039W	FPS1	P23900	669 aa		4.98	□□□□□ -1.61
YPR039W	YPR039W	SPR3	P41901	512 aa		4.98	□□□□□ -1.61
YPR039W	YPR039W	YFL034W	P43564	1073 aa		4.98	□□□□□ -1.61
YPR039W	YPR039W	HGH1	P48362	394 aa	Known RBP	4.98	□□□□□ -1.61
YPR039W	YPR039W	Q0182	Q9ZZW1	134 aa		4.98	□□□□□ -1.61
YPR039W	YPR039W	ACS2	P52910	683 aa	Known RBP	4.97	□□□□□ -1.61
YPR039W	YPR039W	CYT1	P07143	309 aa		4.96	□□□□□ -1.62
YPR039W	YPR039W	MLF3	P32047	452 aa		4.96	□□□□□ -1.62
YPR039W	YPR039W	ALD2	P47771	506 aa		4.96	□□□□□ -1.62
YPR039W	YPR039W	DMA2	P53924	522 aa		4.96	□□□□□ -1.62
YPR039W	YPR039W	TDA6	Q06466	467 aa		4.96	□□□□□ -1.62
YPR039W	YPR039W	GPM1	P00950	247 aa	Known RBP	4.95	□□□□□ -1.62
YPR039W	YPR039W	LEU1	P07264	779 aa	Known RBP	4.94	□□□□□ -1.62
YPR039W	YPR039W	MCM1	P11746	286 aa		4.94	□□□□□ -1.62
YPR039W	YPR039W	YNR014W	P53719	212 aa		4.94	□□□□□ -1.62
YPR039W	YPR039W	PHO87	P25360	923 aa		4.93	□□□□□ -1.62
YPR039W	YPR039W	TY1A-DR2	Q03964	440 aa	Known RBP	4.93	□□□□□ -1.62
YPR039W	YPR039W	RGP1	P16664	663 aa		4.92	□□□□□ -1.62
YPR039W	YPR039W	MSC7	P38694	644 aa		4.92	□□□□□ -1.62
YPR039W	YPR039W	YTA6	P40328	754 aa		4.92	□□□□□ -1.62
YPR039W	YPR039W	CCT8	P47079	568 aa	Known RBP	4.92	□□□□□ -1.62
YPR039W	YPR039W	YPR053C	Q6Q5F3	151 aa		4.92	□□□□□ -1.62
YPR039W	YPR039W	ROM1	P53046	1155 aa		4.91	□□□□□ -1.62
YPR039W	YPR039W	YMR187C	Q03236	431 aa		4.91	□□□□□ -1.62
YPR039W	YPR039W	PDC5	P16467	563 aa	Known RBP	4.9	□□□□□ -1.63
YPR039W	YPR039W	BOI2	P39969	1040 aa		4.9	□□□□□ -1.63
YPR039W	YPR039W	MTO1	P53070	669 aa		4.9	□□□□□ -1.63
YPR039W	YPR039W	GAL2	P13181	574 aa		4.89	□□□□□ -1.63
YPR039W	YPR039W	HAP4	P14064	554 aa		4.89	□□□□□ -1.63
YPR039W	YPR039W	SKN7	P38889	622 aa		4.89	□□□□□ -1.63
YPR039W	YPR039W	SLN1	P39928	1220 aa	Predicted RBP	4.89	□□□□□ -1.63
YPR039W	YPR039W	ECM23	Q02710	187 aa		4.89	□□□□□ -1.63
YPR039W	YPR039W	YCK2	P23292	546 aa	Known RBP	4.88	□□□□□ -1.63
YPR039W	YPR039W	TTI1	P36097	1038 aa		4.88	□□□□□ -1.63
YPR039W	YPR039W	TGL4	P36165	910 aa		4.88	□□□□□ -1.63
YPR039W	YPR039W	KNS1	P32350	737 aa	Predicted RBP	4.87	□□□□□ -1.63
YPR039W	YPR039W	MCX1	P38323	520 aa	Predicted RBP	4.87	□□□□□ -1.63
YPR039W	YPR039W	HXT5	P38695	592 aa		4.87	□□□□□ -1.63
YPR039W	YPR039W	GAS4	Q08271	471 aa		4.87	□□□□□ -1.63
YPR039W	YPR039W	CPS1	P27614	576 aa		4.86	□□□□□ -1.63
YPR039W	YPR039W	NGR1	P32831	672 aa	Known RBP	4.86	□□□□□ -1.63
YPR039W	YPR039W	YNR040W	P53736	256 aa		4.86	□□□□□ -1.63
YPR039W	YPR039W	UBP1	P25037	809 aa		4.85	□□□□□ -1.63
YPR039W	YPR039W	MCA1	Q08601	432 aa		4.85	□□□□□ -1.63
YPR039W	YPR039W	YDR215C	Q12240	137 aa		4.85	□□□□□ -1.63
YPR039W	YPR039W	SUV3	P32580	737 aa		4.84	□□□□□ -1.63
YPR039W	YPR039W	KAP122	P32767	1081 aa		4.84	□□□□□ -1.63
YPR039W	YPR039W	SIS2	P36024	562 aa		4.84	□□□□□ -1.63
YPR039W	YPR039W	MET1	P36150	593 aa		4.84	□□□□□ -1.63
YPR039W	YPR039W	CUS1	Q02554	436 aa	Predicted RBP	4.84	□□□□□ -1.63
YPR039W	YPR039W	VAN1	P23642	535 aa		4.83	□□□□□ -1.64
YPR039W	YPR039W	UBX7	P38349	436 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms