RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	CCP1	P00431	361 aa		5.32	□□□□□ -1.56
HAA1	YPR008W	VTC4	P47075	721 aa		5.32	□□□□□ -1.56
HAA1	YPR008W	CPS1	P27614	576 aa		5.31	□□□□□ -1.56
HAA1	YPR008W	TBS1	P38114	1094 aa		5.31	□□□□□ -1.56
HAA1	YPR008W	SUM1	P46676	1062 aa		5.31	□□□□□ -1.56
HAA1	YPR008W	ACS2	P52910	683 aa	Known RBP	5.31	□□□□□ -1.56
HAA1	YPR008W	ROG3	P43602	733 aa		5.3	□□□□□ -1.56
HAA1	YPR008W	YPQ2	Q06328	317 aa		5.3	□□□□□ -1.56
HAA1	YPR008W	NTH2	P35172	780 aa		5.3	□□□□□ -1.56
HAA1	YPR008W	SHM1	P37292	490 aa	Predicted RBP	5.3	□□□□□ -1.56
HAA1	YPR008W	TY1A-MR1	Q04215	440 aa		5.3	□□□□□ -1.56
HAA1	YPR008W	TSC13	Q99190	310 aa		5.3	□□□□□ -1.56
HAA1	YPR008W	RPP2B	P02400	110 aa	Known RBP	5.29	□□□□□ -1.56
HAA1	YPR008W	RPS6A	P0CX37	236 aa	Known RBP	5.29	□□□□□ -1.56
HAA1	YPR008W	RPS6B	P0CX38	236 aa	Predicted RBP	5.29	□□□□□ -1.56
HAA1	YPR008W	MSN5	P52918	1224 aa		5.29	□□□□□ -1.56
HAA1	YPR008W	TGL4	P36165	910 aa		5.28	□□□□□ -1.56
HAA1	YPR008W	GAL2	P13181	574 aa		5.27	□□□□□ -1.57
HAA1	YPR008W	PHO87	P25360	923 aa		5.27	□□□□□ -1.57
HAA1	YPR008W	JJJ2	P46997	583 aa		5.27	□□□□□ -1.57
HAA1	YPR008W	ROM1	P53046	1155 aa		5.27	□□□□□ -1.57
HAA1	YPR008W	YNL165W	P53891	406 aa		5.27	□□□□□ -1.57
HAA1	YPR008W	RPS31	P05759	152 aa	Known RBP	5.26	□□□□□ -1.57
HAA1	YPR008W	PUP1	P25043	261 aa		5.26	□□□□□ -1.57
HAA1	YPR008W	ECM23	Q02710	187 aa		5.26	□□□□□ -1.57
HAA1	YPR008W	ALA1	P40825	983 aa	Known RBP	5.25	□□□□□ -1.57
HAA1	YPR008W	HPF1	Q05164	967 aa		5.25	□□□□□ -1.57
HAA1	YPR008W	SIS2	P36024	562 aa		5.25	□□□□□ -1.57
HAA1	YPR008W	YFL034W	P43564	1073 aa		5.24	□□□□□ -1.57
HAA1	YPR008W	IRE1	P32361	1115 aa		5.24	□□□□□ -1.57
HAA1	YPR008W	YML083C	Q04526	418 aa		5.24	□□□□□ -1.57
HAA1	YPR008W	UBP15	P50101	1230 aa		5.23	□□□□□ -1.57
HAA1	YPR008W	CUZ1	P53899	274 aa		5.23	□□□□□ -1.57
HAA1	YPR008W	NOB1	Q08444	459 aa	Known RBP	5.23	□□□□□ -1.57
HAA1	YPR008W	PSH1	Q12161	406 aa		5.23	□□□□□ -1.57
HAA1	YPR008W	CYT1	P07143	309 aa		5.22	□□□□□ -1.57
HAA1	YPR008W	HAP4	P14064	554 aa		5.22	□□□□□ -1.57
HAA1	YPR008W	AHP1	P38013	176 aa	Known RBP	5.22	□□□□□ -1.57
HAA1	YPR008W	PDC6	P26263	563 aa	Known RBP	5.21	□□□□□ -1.58
HAA1	YPR008W	GAS4	Q08271	471 aa		5.21	□□□□□ -1.58
HAA1	YPR008W	SUV3	P32580	737 aa		5.2	□□□□□ -1.58
HAA1	YPR008W	UBX7	P38349	436 aa		5.2	□□□□□ -1.58
HAA1	YPR008W	RGA2	Q06407	1009 aa		5.2	□□□□□ -1.58
HAA1	YPR008W	MCM1	P11746	286 aa		5.2	□□□□□ -1.58
HAA1	YPR008W	RLF2	Q12495	606 aa		5.2	□□□□□ -1.58
HAA1	YPR008W	UBP1	P25037	809 aa		5.19	□□□□□ -1.58
HAA1	YPR008W	MLF3	P32047	452 aa		5.19	□□□□□ -1.58
HAA1	YPR008W	YGR035C	P53222	116 aa		5.19	□□□□□ -1.58
HAA1	YPR008W	ALD2	P47771	506 aa		5.19	□□□□□ -1.58
HAA1	YPR008W	Q0182	Q9ZZW1	134 aa		5.19	□□□□□ -1.58
HAA1	YPR008W	NGR1	P32831	672 aa	Known RBP	5.18	□□□□□ -1.58
HAA1	YPR008W	HXT5	P38695	592 aa		5.18	□□□□□ -1.58
HAA1	YPR008W	DIT1	P21623	536 aa		5.17	□□□□□ -1.58
HAA1	YPR008W	SSA4	P22202	642 aa	Known RBP	5.17	□□□□□ -1.58
HAA1	YPR008W	TRK2	P28584	889 aa		5.17	□□□□□ -1.58
HAA1	YPR008W	SUB2	Q07478	446 aa	Known RBP	5.16	□□□□□ -1.58
HAA1	YPR008W	LEU1	P07264	779 aa	Known RBP	5.16	□□□□□ -1.58
HAA1	YPR008W	MRPL16	P38064	232 aa		5.16	□□□□□ -1.58
HAA1	YPR008W	KRE33	P53914	1056 aa	Known RBP	5.16	□□□□□ -1.58
HAA1	YPR008W	YMR265C	Q03508	461 aa	Known RBP	5.16	□□□□□ -1.58
HAA1	YPR008W	VAN1	P23642	535 aa		5.15	□□□□□ -1.59
HAA1	YPR008W	JJJ3	P47138	172 aa		5.15	□□□□□ -1.59
HAA1	YPR008W	SYT1	Q06836	1226 aa		5.15	□□□□□ -1.59
HAA1	YPR008W	TPS3	P38426	1054 aa	Known RBP	5.14	□□□□□ -1.59
HAA1	YPR008W	ADE12	P80210	433 aa	Known RBP	5.14	□□□□□ -1.59
HAA1	YPR008W	CAB1	Q04430	367 aa		5.14	□□□□□ -1.59
HAA1	YPR008W	CEM1	P39525	442 aa		5.14	□□□□□ -1.59
HAA1	YPR008W	SPR3	P41901	512 aa		5.14	□□□□□ -1.59
HAA1	YPR008W	STB3	Q12427	513 aa		5.14	□□□□□ -1.59
HAA1	YPR008W	LYS5	P50113	272 aa		5.13	□□□□□ -1.59
HAA1	YPR008W	DPH6	Q12429	685 aa		5.12	□□□□□ -1.59
HAA1	YPR008W	YDR461C-A	Q2V2P7	80 aa		5.12	□□□□□ -1.59
HAA1	YPR008W	CWC15	Q03772	175 aa	Known RBP	5.12	□□□□□ -1.59
HAA1	YPR008W	RGP1	P16664	663 aa		5.11	□□□□□ -1.59
HAA1	YPR008W	YBR197C	P38306	217 aa		5.11	□□□□□ -1.59
HAA1	YPR008W	ALD4	P46367	519 aa	Known RBP	5.11	□□□□□ -1.59
HAA1	YPR008W	MTO1	P53070	669 aa		5.11	□□□□□ -1.59
HAA1	YPR008W	TRS33	Q99394	268 aa		5.11	□□□□□ -1.59
HAA1	YPR008W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	RIP-Chip
HAA1	YPR008W	MSC7	P38694	644 aa		5.1	□□□□□ -1.59
HAA1	YPR008W	SCD5	P34758	872 aa		5.09	□□□□□ -1.59
HAA1	YPR008W	MDJ1	P35191	511 aa		5.09	□□□□□ -1.59
HAA1	YPR008W	FOX2	Q02207	900 aa	Known RBP	5.09	□□□□□ -1.59
HAA1	YPR008W	UTP4	Q06679	776 aa	Known RBP	5.09	□□□□□ -1.59
HAA1	YPR008W	YTA6	P40328	754 aa		5.09	□□□□□ -1.59
HAA1	YPR008W	PUN1	Q06991	263 aa		5.09	□□□□□ -1.59
HAA1	YPR008W	PUF6	Q04373	656 aa	Known RBP	5.08	□□□□□ -1.6
HAA1	YPR008W	RPC31	P17890	251 aa		5.08	□□□□□ -1.6
HAA1	YPR008W	FPS1	P23900	669 aa		5.08	□□□□□ -1.6
HAA1	YPR008W	QDR2	P40474	542 aa		5.08	□□□□□ -1.6
HAA1	YPR008W	MRPL33	P20084	86 aa		5.07	□□□□□ -1.6
HAA1	YPR008W	VMA3	P25515	160 aa		5.07	□□□□□ -1.6
HAA1	YPR008W	KAP122	P32767	1081 aa		5.07	□□□□□ -1.6
HAA1	YPR008W	CWH41	P53008	833 aa		5.07	□□□□□ -1.6
HAA1	YPR008W	YNR040W	P53736	256 aa		5.07	□□□□□ -1.6
HAA1	YPR008W	CUS1	Q02554	436 aa	Predicted RBP	5.07	□□□□□ -1.6
HAA1	YPR008W	TY1A-DR2	Q03964	440 aa	Known RBP	5.07	□□□□□ -1.6
HAA1	YPR008W	ISC10	P32645	267 aa		5.06	□□□□□ -1.6
HAA1	YPR008W	YFL066C	P43538	392 aa		5.06	□□□□□ -1.6
HAA1	YPR008W	BOI1	P38041	980 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms