RNA–Protein interactions for RNA: YPL208W

RKM1, Transcript of SET-domain lysine-N-methyltransferase, yeast

Gene RKM1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM1	YPL208W	SUM1	P46676	1062 aa		4.42	□□□□□ -1.7
RKM1	YPL208W	JJJ3	P47138	172 aa		4.42	□□□□□ -1.7
RKM1	YPL208W	RIM21	P48565	533 aa		4.42	□□□□□ -1.7
RKM1	YPL208W	YMR265C	Q03508	461 aa	Known RBP	4.42	□□□□□ -1.7
RKM1	YPL208W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.42	□□□□□ -1.7	not detected
RKM1	YPL208W	BIM1	P40013	344 aa		4.42	□□□□□ -1.7
RKM1	YPL208W	TY1A-DR3	Q12441	440 aa		4.42	□□□□□ -1.7
RKM1	YPL208W	ATG32	P40458	529 aa		4.41	□□□□□ -1.7
RKM1	YPL208W	ICP55	P40051	511 aa		4.4	□□□□□ -1.7
RKM1	YPL208W	TIF1	P10081	395 aa	Known RBP	4.4	□□□□□ -1.71
RKM1	YPL208W	RDS2	P19541	446 aa	Known RBP	4.4	□□□□□ -1.71
RKM1	YPL208W	DIT1	P21623	536 aa		4.4	□□□□□ -1.71
RKM1	YPL208W	RTG2	P32608	588 aa	Known RBP	4.4	□□□□□ -1.71
RKM1	YPL208W	MDJ1	P35191	511 aa		4.4	□□□□□ -1.71
RKM1	YPL208W	RPL34B	P40525	121 aa	Known RBP	4.4	□□□□□ -1.71
RKM1	YPL208W	KRE33	P53914	1056 aa	Known RBP	4.4	□□□□□ -1.71
RKM1	YPL208W	ENO1	P00924	437 aa	Known RBP	4.39	□□□□□ -1.71
RKM1	YPL208W	AIM9	P40053	627 aa	Known RBP	4.39	□□□□□ -1.71
RKM1	YPL208W	JJJ2	P46997	583 aa		4.39	□□□□□ -1.71
RKM1	YPL208W	ADE12	P80210	433 aa	Known RBP	4.39	□□□□□ -1.71
RKM1	YPL208W	SWI5	P08153	709 aa		4.38	□□□□□ -1.71
RKM1	YPL208W	IRE1	P32361	1115 aa		4.38	□□□□□ -1.71
RKM1	YPL208W	MRX10	Q05648	414 aa		4.37	□□□□□ -1.71
RKM1	YPL208W	SYT1	Q06836	1226 aa		4.37	□□□□□ -1.71
RKM1	YPL208W	THI72	Q08579	599 aa		4.37	□□□□□ -1.71
RKM1	YPL208W	PUS1	Q12211	544 aa	Known RBP	4.37	□□□□□ -1.71
RKM1	YPL208W	SHM1	P37292	490 aa	Predicted RBP	4.37	□□□□□ -1.71
RKM1	YPL208W	YFL034W	P43564	1073 aa		4.37	□□□□□ -1.71
RKM1	YPL208W	NSG2	P53898	299 aa		4.37	□□□□□ -1.71
RKM1	YPL208W	AI1	P03875	834 aa		4.36	□□□□□ -1.71
RKM1	YPL208W	PHM7	Q12252	991 aa		4.36	□□□□□ -1.71
RKM1	YPL208W	RPS6A	P0CX37	236 aa	Known RBP	4.35	□□□□□ -1.71
RKM1	YPL208W	RPS6B	P0CX38	236 aa	Predicted RBP	4.35	□□□□□ -1.71
RKM1	YPL208W	PDI1	P17967	522 aa	Known RBP	4.35	□□□□□ -1.71
RKM1	YPL208W	NTH2	P35172	780 aa		4.35	□□□□□ -1.71
RKM1	YPL208W	YDR461C-A	Q2V2P7	80 aa		4.35	□□□□□ -1.71
RKM1	YPL208W	PSH1	Q12161	406 aa		4.35	□□□□□ -1.71
RKM1	YPL208W	PDC6	P26263	563 aa	Known RBP	4.34	□□□□□ -1.71
RKM1	YPL208W	MRPL16	P38064	232 aa		4.34	□□□□□ -1.71
RKM1	YPL208W	LEO1	P38439	464 aa		4.34	□□□□□ -1.71
RKM1	YPL208W	YPQ2	Q06328	317 aa		4.34	□□□□□ -1.71
RKM1	YPL208W	FPS1	P23900	669 aa		4.33	□□□□□ -1.72
RKM1	YPL208W	KTR7	P40504	517 aa		4.33	□□□□□ -1.72
RKM1	YPL208W	TSC13	Q99190	310 aa		4.33	□□□□□ -1.72
RKM1	YPL208W	RPS31	P05759	152 aa	Known RBP	4.32	□□□□□ -1.72
RKM1	YPL208W	YFL066C	P43538	392 aa		4.32	□□□□□ -1.72
RKM1	YPL208W	LSB3	P43603	459 aa	Known RBP	4.32	□□□□□ -1.72
RKM1	YPL208W	STB3	Q12427	513 aa		4.32	□□□□□ -1.72
RKM1	YPL208W	PEP12	P32854	288 aa		4.32	□□□□□ -1.72
RKM1	YPL208W	YTA6	P40328	754 aa		4.3	□□□□□ -1.72
RKM1	YPL208W	SBE2	P42223	864 aa	Known RBP	4.3	□□□□□ -1.72
RKM1	YPL208W	YNL165W	P53891	406 aa		4.3	□□□□□ -1.72
RKM1	YPL208W	CYT1	P07143	309 aa		4.3	□□□□□ -1.72
RKM1	YPL208W	MCM1	P11746	286 aa		4.3	□□□□□ -1.72
RKM1	YPL208W	SPR3	P41901	512 aa		4.29	□□□□□ -1.72
RKM1	YPL208W	ACS2	P52910	683 aa	Known RBP	4.29	□□□□□ -1.72
RKM1	YPL208W	YNR014W	P53719	212 aa		4.29	□□□□□ -1.72
RKM1	YPL208W	Q0182	Q9ZZW1	134 aa		4.29	□□□□□ -1.72
RKM1	YPL208W	LEU1	P07264	779 aa	Known RBP	4.28	□□□□□ -1.72
RKM1	YPL208W	PHO87	P25360	923 aa		4.28	□□□□□ -1.72
RKM1	YPL208W	MLF3	P32047	452 aa		4.28	□□□□□ -1.72
RKM1	YPL208W	TDA6	Q06466	467 aa		4.28	□□□□□ -1.72
RKM1	YPL208W	GPM1	P00950	247 aa	Known RBP	4.27	□□□□□ -1.73
RKM1	YPL208W	YPR053C	Q6Q5F3	151 aa		4.27	□□□□□ -1.73
RKM1	YPL208W	HAP4	P14064	554 aa		4.27	□□□□□ -1.73
RKM1	YPL208W	ALD2	P47771	506 aa		4.27	□□□□□ -1.73
RKM1	YPL208W	DMA2	P53924	522 aa		4.27	□□□□□ -1.73
RKM1	YPL208W	RGP1	P16664	663 aa		4.26	□□□□□ -1.73
RKM1	YPL208W	YMR187C	Q03236	431 aa		4.26	□□□□□ -1.73
RKM1	YPL208W	SIS2	P36024	562 aa		4.25	□□□□□ -1.73
RKM1	YPL208W	BOI2	P39969	1040 aa		4.25	□□□□□ -1.73
RKM1	YPL208W	TY1A-DR2	Q03964	440 aa	Known RBP	4.25	□□□□□ -1.73
RKM1	YPL208W	GAS4	Q08271	471 aa		4.25	□□□□□ -1.73
RKM1	YPL208W	RPP1A	P05318	106 aa	Predicted RBP	4.25	□□□□□ -1.73
RKM1	YPL208W	MTO1	P53070	669 aa		4.25	□□□□□ -1.73
RKM1	YPL208W	GAL2	P13181	574 aa		4.24	□□□□□ -1.73
RKM1	YPL208W	PDC5	P16467	563 aa	Known RBP	4.24	□□□□□ -1.73
RKM1	YPL208W	KNS1	P32350	737 aa	Predicted RBP	4.24	□□□□□ -1.73
RKM1	YPL208W	MET1	P36150	593 aa		4.24	□□□□□ -1.73
RKM1	YPL208W	CCT8	P47079	568 aa	Known RBP	4.24	□□□□□ -1.73
RKM1	YPL208W	ROM1	P53046	1155 aa		4.23	□□□□□ -1.73
RKM1	YPL208W	UBP1	P25037	809 aa		4.22	□□□□□ -1.73
RKM1	YPL208W	MCX1	P38323	520 aa	Predicted RBP	4.22	□□□□□ -1.73
RKM1	YPL208W	MSC7	P38694	644 aa		4.22	□□□□□ -1.73
RKM1	YPL208W	SKN7	P38889	622 aa		4.22	□□□□□ -1.73
RKM1	YPL208W	ECM23	Q02710	187 aa		4.22	□□□□□ -1.73
RKM1	YPL208W	NGR1	P32831	672 aa	Known RBP	4.22	□□□□□ -1.73
RKM1	YPL208W	TGL4	P36165	910 aa		4.22	□□□□□ -1.73
RKM1	YPL208W	VAN1	P23642	535 aa		4.21	□□□□□ -1.74
RKM1	YPL208W	SCD5	P34758	872 aa		4.21	□□□□□ -1.74
RKM1	YPL208W	TTI1	P36097	1038 aa		4.21	□□□□□ -1.74
RKM1	YPL208W	KAP122	P32767	1081 aa		4.2	□□□□□ -1.74
RKM1	YPL208W	UTP4	Q06679	776 aa	Known RBP	4.2	□□□□□ -1.74
RKM1	YPL208W	SBP1	P10080	294 aa	Known RBP	4.19	□□□□□ -1.74
RKM1	YPL208W	HXT5	P38695	592 aa		4.19	□□□□□ -1.74
RKM1	YPL208W	HEH2	Q03281	663 aa		4.19	□□□□□ -1.74
RKM1	YPL208W	YCK2	P23292	546 aa	Known RBP	4.19	□□□□□ -1.74
RKM1	YPL208W	NCL1	P38205	684 aa	Known RBP	4.19	□□□□□ -1.74
RKM1	YPL208W	SLN1	P39928	1220 aa	Predicted RBP	4.19	□□□□□ -1.74
RKM1	YPL208W	CWH41	P53008	833 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms