RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YDJ1P25491 409 aaKnown RBP5.73□□□□□ -1.49
PEP12YOR036W JJJ2P46997 583 aa5.73□□□□□ -1.49
PEP12YOR036W SHM1P37292 490 aaPredicted RBP5.72□□□□□ -1.49
PEP12YOR036W SUM1P46676 1062 aa5.72□□□□□ -1.49
PEP12YOR036W GPM1P00950 247 aaKnown RBP5.71□□□□□ -1.5
PEP12YOR036W SPT5P27692 1063 aaKnown RBP5.71□□□□□ -1.5
PEP12YOR036W TBS1P38114 1094 aa5.71□□□□□ -1.5
PEP12YOR036W YNR014WP53719 212 aa5.71□□□□□ -1.5
PEP12YOR036W SBP1P10080 294 aaKnown RBP5.7□□□□□ -1.5
PEP12YOR036W YCK2P23292 546 aaKnown RBP5.7□□□□□ -1.5
PEP12YOR036W MCX1P38323 520 aaPredicted RBP5.7□□□□□ -1.5
PEP12YOR036W SLX8P40072 274 aa5.7□□□□□ -1.5
PEP12YOR036W IRE1P32361 1115 aa5.69□□□□□ -1.5
PEP12YOR036W ALA1P40825 983 aaKnown RBP5.69□□□□□ -1.5
PEP12YOR036W FPS1P23900 669 aa5.68□□□□□ -1.5
PEP12YOR036W YBL036CP38197 257 aa5.68□□□□□ -1.5
PEP12YOR036W SOH1P38633 127 aa5.68□□□□□ -1.5
PEP12YOR036W HDA3Q06623 655 aa5.68□□□□□ -1.5
PEP12YOR036W PSH1Q12161 406 aa5.68□□□□□ -1.5
PEP12YOR036W YDR215CQ12240 137 aa5.67□□□□□ -1.5
PEP12YOR036W PDC6P26263 563 aaKnown RBP5.66□□□□□ -1.5
PEP12YOR036W MRPL16P38064 232 aa5.66□□□□□ -1.5
PEP12YOR036W SLN1P39928 1220 aaPredicted RBP5.65□□□□□ -1.5
PEP12YOR036W BOI2P39969 1040 aa5.65□□□□□ -1.5
PEP12YOR036W UTP13Q05946 817 aaKnown RBP5.65□□□□□ -1.5
PEP12YOR036W RQC2Q12532 1038 aaKnown RBP5.65□□□□□ -1.5
PEP12YOR036W HPC2Q01448 625 aa5.64□□□□□ -1.51
PEP12YOR036W STB3Q12427 513 aa5.64□□□□□ -1.51
PEP12YOR036W RPS31P05759 152 aaKnown RBP5.63□□□□□ -1.51
PEP12YOR036W BIO2P32451 375 aa5.63□□□□□ -1.51
PEP12YOR036W MCA1Q08601 432 aa5.63□□□□□ -1.51
PEP12YOR036W PDC5P16467 563 aaKnown RBP5.62□□□□□ -1.51
PEP12YOR036W PKC1P24583 1151 aa5.62□□□□□ -1.51
PEP12YOR036W AMN1P38285 549 aaPredicted RBP5.62□□□□□ -1.51
PEP12YOR036W ATG3P40344 310 aa5.62□□□□□ -1.51
PEP12YOR036W SPR3P41901 512 aa5.62□□□□□ -1.51
PEP12YOR036W YPQ2Q06328 317 aa5.62□□□□□ -1.51
PEP12YOR036W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
PEP12YOR036W KNS1P32350 737 aaPredicted RBP5.61□□□□□ -1.51
PEP12YOR036W TFB3Q03290 321 aa5.61□□□□□ -1.51
PEP12YOR036W GLT1Q12680 2145 aaKnown RBP5.61□□□□□ -1.51
PEP12YOR036W LEU3P08638 886 aa5.6□□□□□ -1.51
PEP12YOR036W TY1A-DR2Q03964 440 aaKnown RBP5.6□□□□□ -1.51
PEP12YOR036W ENO2P00925 437 aaKnown RBP5.59□□□□□ -1.51
PEP12YOR036W SWI5P08153 709 aa5.59□□□□□ -1.51
PEP12YOR036W SUP45P12385 437 aaKnown RBP5.59□□□□□ -1.51
PEP12YOR036W BRL1P38770 471 aa5.59□□□□□ -1.51
PEP12YOR036W YPP1P46951 817 aa5.59□□□□□ -1.51
PEP12YOR036W MET1P36150 593 aa5.58□□□□□ -1.52
PEP12YOR036W MSC7P38694 644 aa5.58□□□□□ -1.52
PEP12YOR036W LEU1P07264 779 aaKnown RBP5.57□□□□□ -1.52
PEP12YOR036W LSB6P42951 607 aa5.57□□□□□ -1.52
PEP12YOR036W ALD2P47771 506 aa5.57□□□□□ -1.52
PEP12YOR036W YNL165WP53891 406 aa5.57□□□□□ -1.52
PEP12YOR036W YNL108CP53929 270 aa5.57□□□□□ -1.52
PEP12YOR036W RDS2P19541 446 aaKnown RBP5.56□□□□□ -1.52
PEP12YOR036W RPN1P38764 993 aaKnown RBP5.56□□□□□ -1.52
PEP12YOR036W PRY1P47032 299 aa5.56□□□□□ -1.52
PEP12YOR036W TAT1P38085 619 aa5.55□□□□□ -1.52
PEP12YOR036W AIM9P40053 627 aaKnown RBP5.55□□□□□ -1.52
PEP12YOR036W RIM21P48565 533 aa5.55□□□□□ -1.52
PEP12YOR036W RPS6AP0CX37 236 aaKnown RBP5.53□□□□□ -1.52
PEP12YOR036W RPS6BP0CX38 236 aaPredicted RBP5.53□□□□□ -1.52
PEP12YOR036W RGP1P16664 663 aa5.53□□□□□ -1.52
PEP12YOR036W MCM1P11746 286 aa5.51□□□□□ -1.53
PEP12YOR036W MLF3P32047 452 aa5.5□□□□□ -1.53
PEP12YOR036W NTH2P35172 780 aa5.49□□□□□ -1.53
PEP12YOR036W YPL034WQ03083 165 aa5.49□□□□□ -1.53
PEP12YOR036W MAC1P35192 417 aa5.47□□□□□ -1.53
PEP12YOR036W YTA6P40328 754 aa5.47□□□□□ -1.53
PEP12YOR036W Q0182Q9ZZW1 134 aa5.47□□□□□ -1.53
PEP12YOR036W TPS3P38426 1054 aaKnown RBP5.46□□□□□ -1.54
PEP12YOR036W YFL034WP43564 1073 aa5.46□□□□□ -1.54
PEP12YOR036W BUD9P53226 547 aa5.46□□□□□ -1.54
PEP12YOR036W RPP1AP05318 106 aaPredicted RBP5.45□□□□□ -1.54
PEP12YOR036W PDI1P17967 522 aaKnown RBP5.45□□□□□ -1.54
PEP12YOR036W PGM2P37012 569 aaKnown RBP5.45□□□□□ -1.54
PEP12YOR036W PRK1P40494 810 aa5.45□□□□□ -1.54
PEP12YOR036W ALO1P54783 526 aaKnown RBP5.45□□□□□ -1.54
PEP12YOR036W MRX10Q05648 414 aa5.45□□□□□ -1.54
PEP12YOR036W ALG14P38242 237 aa5.44□□□□□ -1.54
PEP12YOR036W NHA1Q99271 985 aa5.44□□□□□ -1.54
PEP12YOR036W ENO1P00924 437 aaKnown RBP5.43□□□□□ -1.54
PEP12YOR036W YJL007CP47080 104 aa5.43□□□□□ -1.54
PEP12YOR036W HEH2Q03281 663 aa5.43□□□□□ -1.54
PEP12YOR036W NAR1P23503 491 aaKnown RBP5.42□□□□□ -1.54
PEP12YOR036W INP52P50942 1183 aa5.42□□□□□ -1.54
PEP12YOR036W TSC13Q99190 310 aa5.42□□□□□ -1.54
PEP12YOR036W CYT1P07143 309 aa5.41□□□□□ -1.54
PEP12YOR036W MTO1P53070 669 aa5.41□□□□□ -1.54
PEP12YOR036W SKP1P52286 194 aa5.4□□□□□ -1.54
PEP12YOR036W GIS4Q04233 774 aa5.4□□□□□ -1.54
PEP12YOR036W GAS5Q08193 484 aa5.4□□□□□ -1.54
PEP12YOR036W PEP12P32854 288 aa5.39□□□□□ -1.55
PEP12YOR036W OMA1P36163 345 aa5.39□□□□□ -1.55
PEP12YOR036W AI3P03877 415 aa5.38□□□□□ -1.55
PEP12YOR036W PGM1P33401 570 aaKnown RBP5.38□□□□□ -1.55
PEP12YOR036W NCL1P38205 684 aaKnown RBP5.37□□□□□ -1.55
PEP12YOR036W ATG32P40458 529 aa5.37□□□□□ -1.55
PEP12YOR036W YNR040WP53736 256 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms