RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C DIT1P21623 536 aa6.96□□□□□ -1.3
NYV1YLR093C YNL108CP53929 270 aa6.96□□□□□ -1.3
NYV1YLR093C HDA3Q06623 655 aa6.96□□□□□ -1.3
NYV1YLR093C PUS1Q12211 544 aaKnown RBP6.95□□□□□ -1.3
NYV1YLR093C YDR461C-AQ2V2P7 80 aa6.95□□□□□ -1.3
NYV1YLR093C SYT1Q06836 1226 aa6.94□□□□□ -1.3
NYV1YLR093C UTP7P40055 554 aaKnown RBP6.93□□□□□ -1.3
NYV1YLR093C JJJ2P46997 583 aa6.93□□□□□ -1.3
NYV1YLR093C YMR265CQ03508 461 aaKnown RBP6.93□□□□□ -1.3
NYV1YLR093C RDS2P19541 446 aaKnown RBP6.92□□□□□ -1.3
NYV1YLR093C AI1P03875 834 aa6.91□□□□□ -1.3
NYV1YLR093C ALA1P40825 983 aaKnown RBP6.9□□□□□ -1.3
NYV1YLR093C YJL007CP47080 104 aa6.9□□□□□ -1.3
NYV1YLR093C HGH1P48362 394 aaKnown RBP6.9□□□□□ -1.3
NYV1YLR093C IRE1P32361 1115 aa6.89□□□□□ -1.31
NYV1YLR093C NSG2P53898 299 aa6.89□□□□□ -1.31
NYV1YLR093C KRE33P53914 1056 aaKnown RBP6.89□□□□□ -1.31
NYV1YLR093C MRX10Q05648 414 aa6.89□□□□□ -1.31
NYV1YLR093C YPQ2Q06328 317 aa6.89□□□□□ -1.31
NYV1YLR093C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31 RIP-Chip
NYV1YLR093C MDJ1P35191 511 aa6.88□□□□□ -1.31
NYV1YLR093C SHM1P37292 490 aaPredicted RBP6.88□□□□□ -1.31
NYV1YLR093C YFL066CP43538 392 aa6.88□□□□□ -1.31
NYV1YLR093C ADE12P80210 433 aaKnown RBP6.88□□□□□ -1.31
NYV1YLR093C SWI5P08153 709 aa6.87□□□□□ -1.31
NYV1YLR093C AIM9P40053 627 aaKnown RBP6.87□□□□□ -1.31
NYV1YLR093C YFL034WP43564 1073 aa6.87□□□□□ -1.31
NYV1YLR093C MCM1P11746 286 aa6.85□□□□□ -1.31
NYV1YLR093C BIM1P40013 344 aa6.85□□□□□ -1.31
NYV1YLR093C PDC6P26263 563 aaKnown RBP6.84□□□□□ -1.31
NYV1YLR093C THI72Q08579 599 aa6.84□□□□□ -1.31
NYV1YLR093C PSH1Q12161 406 aa6.84□□□□□ -1.31
NYV1YLR093C ENO1P00924 437 aaKnown RBP6.83□□□□□ -1.32
NYV1YLR093C TIF1P10081 395 aaKnown RBP6.83□□□□□ -1.32
NYV1YLR093C ATG32P40458 529 aa6.83□□□□□ -1.32
NYV1YLR093C LSB3P43603 459 aaKnown RBP6.83□□□□□ -1.32
NYV1YLR093C RPS31P05759 152 aaKnown RBP6.82□□□□□ -1.32
NYV1YLR093C RPS6AP0CX37 236 aaKnown RBP6.82□□□□□ -1.32
NYV1YLR093C RPS6BP0CX38 236 aaPredicted RBP6.82□□□□□ -1.32
NYV1YLR093C FPS1P23900 669 aa6.81□□□□□ -1.32
NYV1YLR093C PEP12P32854 288 aa6.81□□□□□ -1.32
NYV1YLR093C GPM1P00950 247 aaKnown RBP6.8□□□□□ -1.32
NYV1YLR093C LEU1P07264 779 aaKnown RBP6.8□□□□□ -1.32
NYV1YLR093C RTG2P32608 588 aaKnown RBP6.8□□□□□ -1.32
NYV1YLR093C RPL34BP40525 121 aaKnown RBP6.8□□□□□ -1.32
NYV1YLR093C TSC13Q99190 310 aa6.8□□□□□ -1.32
NYV1YLR093C RPP1AP05318 106 aaPredicted RBP6.79□□□□□ -1.32
NYV1YLR093C MRPL16P38064 232 aa6.79□□□□□ -1.32
NYV1YLR093C YPR053CQ6Q5F3 151 aa6.79□□□□□ -1.32
NYV1YLR093C NTH2P35172 780 aa6.78□□□□□ -1.32
NYV1YLR093C SPR3P41901 512 aa6.78□□□□□ -1.32
NYV1YLR093C STB3Q12427 513 aa6.78□□□□□ -1.32
NYV1YLR093C CCT8P47079 568 aaKnown RBP6.77□□□□□ -1.33
NYV1YLR093C SIS2P36024 562 aa6.76□□□□□ -1.33
NYV1YLR093C SKN7P38889 622 aa6.76□□□□□ -1.33
NYV1YLR093C SBE2P42223 864 aaKnown RBP6.76□□□□□ -1.33
NYV1YLR093C ALD2P47771 506 aa6.76□□□□□ -1.33
NYV1YLR093C PDI1P17967 522 aaKnown RBP6.75□□□□□ -1.33
NYV1YLR093C LEO1P38439 464 aa6.75□□□□□ -1.33
NYV1YLR093C YNL165WP53891 406 aa6.75□□□□□ -1.33
NYV1YLR093C TDA6Q06466 467 aa6.75□□□□□ -1.33
NYV1YLR093C CYT1P07143 309 aa6.74□□□□□ -1.33
NYV1YLR093C KNS1P32350 737 aaPredicted RBP6.74□□□□□ -1.33
NYV1YLR093C MCX1P38323 520 aaPredicted RBP6.74□□□□□ -1.33
NYV1YLR093C YTA6P40328 754 aa6.74□□□□□ -1.33
NYV1YLR093C UBP1P25037 809 aa6.73□□□□□ -1.33
NYV1YLR093C PHO87P25360 923 aa6.73□□□□□ -1.33
NYV1YLR093C TY1A-DR2Q03964 440 aaKnown RBP6.73□□□□□ -1.33
NYV1YLR093C PDC5P16467 563 aaKnown RBP6.72□□□□□ -1.33
NYV1YLR093C RGP1P16664 663 aa6.72□□□□□ -1.33
NYV1YLR093C YNR014WP53719 212 aa6.72□□□□□ -1.33
NYV1YLR093C MET1P36150 593 aa6.71□□□□□ -1.34
NYV1YLR093C MSC7P38694 644 aa6.71□□□□□ -1.34
NYV1YLR093C YMR187CQ03236 431 aa6.71□□□□□ -1.34
NYV1YLR093C UTP4Q06679 776 aaKnown RBP6.71□□□□□ -1.34
NYV1YLR093C GAS4Q08271 471 aa6.71□□□□□ -1.34
NYV1YLR093C HAP4P14064 554 aa6.7□□□□□ -1.34
NYV1YLR093C MLF3P32047 452 aa6.7□□□□□ -1.34
NYV1YLR093C ACS2P52910 683 aaKnown RBP6.69□□□□□ -1.34
NYV1YLR093C BOI2P39969 1040 aa6.68□□□□□ -1.34
NYV1YLR093C Q0182Q9ZZW1 134 aa6.68□□□□□ -1.34
NYV1YLR093C SCD5P34758 872 aa6.67□□□□□ -1.34
NYV1YLR093C SKP1P52286 194 aa6.66□□□□□ -1.34
NYV1YLR093C HEH2Q03281 663 aa6.66□□□□□ -1.34
NYV1YLR093C NGR1P32831 672 aaKnown RBP6.65□□□□□ -1.34
NYV1YLR093C YDR215CQ12240 137 aa6.65□□□□□ -1.34
NYV1YLR093C GAL2P13181 574 aa6.64□□□□□ -1.35
NYV1YLR093C YCK2P23292 546 aaKnown RBP6.64□□□□□ -1.35
NYV1YLR093C HXT5P38695 592 aa6.64□□□□□ -1.35
NYV1YLR093C KTR7P40504 517 aa6.64□□□□□ -1.35
NYV1YLR093C ROM1P53046 1155 aa6.62□□□□□ -1.35
NYV1YLR093C MTO1P53070 669 aa6.61□□□□□ -1.35
NYV1YLR093C KAP122P32767 1081 aa6.6□□□□□ -1.35
NYV1YLR093C NCL1P38205 684 aaKnown RBP6.6□□□□□ -1.35
NYV1YLR093C RPC31P17890 251 aa6.59□□□□□ -1.35
NYV1YLR093C PRK1P40494 810 aa6.59□□□□□ -1.35
NYV1YLR093C CUS1Q02554 436 aaPredicted RBP6.59□□□□□ -1.35
NYV1YLR093C VAN1P23642 535 aa6.58□□□□□ -1.36
NYV1YLR093C TTI1P36097 1038 aa6.58□□□□□ -1.36
NYV1YLR093C SLN1P39928 1220 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms