RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C ECM23Q02710 187 aa5.33□□□□□ -1.56
AFB1YLR040C SSA4P22202 642 aaKnown RBP5.32□□□□□ -1.56
AFB1YLR040C YFL034WP43564 1073 aa5.32□□□□□ -1.56
AFB1YLR040C SUM1P46676 1062 aa5.32□□□□□ -1.56
AFB1YLR040C UBP2Q01476 1272 aa5.32□□□□□ -1.56
AFB1YLR040C YML083CQ04526 418 aa5.32□□□□□ -1.56
AFB1YLR040C NOB1Q08444 459 aaKnown RBP5.32□□□□□ -1.56
AFB1YLR040C TY1A-BLQ12266 440 aa5.32□□□□□ -1.56
AFB1YLR040C DAL1P32375 460 aa5.31□□□□□ -1.56
AFB1YLR040C ROM1P53046 1155 aa5.31□□□□□ -1.56
AFB1YLR040C SUB2Q07478 446 aaKnown RBP5.31□□□□□ -1.56
AFB1YLR040C HAP4P14064 554 aa5.3□□□□□ -1.56
AFB1YLR040C OSH7P38755 437 aa5.3□□□□□ -1.56
AFB1YLR040C SCW11P53189 542 aa5.3□□□□□ -1.56
AFB1YLR040C TAF7Q05021 590 aa5.3□□□□□ -1.56
AFB1YLR040C YPQ2Q06328 317 aa5.3□□□□□ -1.56
AFB1YLR040C YDL176WQ12027 708 aa5.3□□□□□ -1.56
AFB1YLR040C SLA1P32790 1244 aa5.29□□□□□ -1.56
AFB1YLR040C UBX7P38349 436 aa5.29□□□□□ -1.56
AFB1YLR040C ACO2P39533 789 aa5.29□□□□□ -1.56
AFB1YLR040C MSN5P52918 1224 aa5.29□□□□□ -1.56
AFB1YLR040C TY1A-DR3Q12441 440 aa5.29□□□□□ -1.56
AFB1YLR040C GBP2P25555 427 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
AFB1YLR040C ALA1P40825 983 aaKnown RBP5.28□□□□□ -1.56
AFB1YLR040C VTC4P47075 721 aa5.28□□□□□ -1.56
AFB1YLR040C GAS4Q08271 471 aa5.28□□□□□ -1.56
AFB1YLR040C CDC19P00549 500 aaKnown RBP5.27□□□□□ -1.57
AFB1YLR040C CYT1P07143 309 aa5.27□□□□□ -1.57
AFB1YLR040C CAF120P53836 1060 aa5.27□□□□□ -1.57
AFB1YLR040C NAM8Q00539 523 aaKnown RBP5.27□□□□□ -1.57
AFB1YLR040C SHM1P37292 490 aaPredicted RBP5.26□□□□□ -1.57
AFB1YLR040C RPS31P05759 152 aaKnown RBP5.25□□□□□ -1.57
AFB1YLR040C YIR007WP40566 764 aa5.25□□□□□ -1.57
AFB1YLR040C JJJ2P46997 583 aa5.25□□□□□ -1.57
AFB1YLR040C YNL165WP53891 406 aa5.25□□□□□ -1.57
AFB1YLR040C IRE1P32361 1115 aa5.24□□□□□ -1.57
AFB1YLR040C MCM1P11746 286 aa5.23□□□□□ -1.57
AFB1YLR040C VAN1P23642 535 aa5.23□□□□□ -1.57
AFB1YLR040C UBP1P25037 809 aa5.23□□□□□ -1.57
AFB1YLR040C SUV3P32580 737 aa5.23□□□□□ -1.57
AFB1YLR040C NGR1P32831 672 aaKnown RBP5.23□□□□□ -1.57
AFB1YLR040C ROG3P43602 733 aa5.23□□□□□ -1.57
AFB1YLR040C TY1A-MR1Q04215 440 aa5.23□□□□□ -1.57
AFB1YLR040C CCP1P00431 361 aa5.22□□□□□ -1.57
AFB1YLR040C AHP1P38013 176 aaKnown RBP5.22□□□□□ -1.57
AFB1YLR040C UBP15P50101 1230 aa5.21□□□□□ -1.58
AFB1YLR040C YPL062WQ02781 134 aa5.21□□□□□ -1.58
AFB1YLR040C PSH1Q12161 406 aa5.21□□□□□ -1.58
AFB1YLR040C Q0182Q9ZZW1 134 aa5.21□□□□□ -1.58
AFB1YLR040C PDC6P26263 563 aaKnown RBP5.2□□□□□ -1.58
AFB1YLR040C HXT5P38695 592 aa5.2□□□□□ -1.58
AFB1YLR040C CWC15Q03772 175 aaKnown RBP5.2□□□□□ -1.58
AFB1YLR040C MLF3P32047 452 aa5.19□□□□□ -1.58
AFB1YLR040C PUF6Q04373 656 aaKnown RBP5.19□□□□□ -1.58
AFB1YLR040C PUN1Q06991 263 aa5.19□□□□□ -1.58
AFB1YLR040C TRS33Q99394 268 aa5.19□□□□□ -1.58
AFB1YLR040C TPS3P38426 1054 aaKnown RBP5.18□□□□□ -1.58
AFB1YLR040C CUZ1P53899 274 aa5.18□□□□□ -1.58
AFB1YLR040C YBR197CP38306 217 aa5.17□□□□□ -1.58
AFB1YLR040C LEU1P07264 779 aaKnown RBP5.16□□□□□ -1.58
AFB1YLR040C ALD4P46367 519 aaKnown RBP5.16□□□□□ -1.58
AFB1YLR040C ALD2P47771 506 aa5.16□□□□□ -1.58
AFB1YLR040C CWH41P53008 833 aa5.16□□□□□ -1.58
AFB1YLR040C CAB1Q04430 367 aa5.16□□□□□ -1.58
AFB1YLR040C SSA1P10591 642 aaKnown RBP5.15□□□□□ -1.59
AFB1YLR040C SRS2P12954 1174 aa5.15□□□□□ -1.59
AFB1YLR040C DIT1P21623 536 aa5.15□□□□□ -1.59
AFB1YLR040C MRPL16P38064 232 aa5.15□□□□□ -1.59
AFB1YLR040C HPF1Q05164 967 aa5.15□□□□□ -1.59
AFB1YLR040C SCD5P34758 872 aa5.14□□□□□ -1.59
AFB1YLR040C YTA6P40328 754 aa5.14□□□□□ -1.59
AFB1YLR040C FOX2Q02207 900 aaKnown RBP5.14□□□□□ -1.59
AFB1YLR040C YMR265CQ03508 461 aaKnown RBP5.14□□□□□ -1.59
AFB1YLR040C PNP1Q05788 311 aa5.14□□□□□ -1.59
AFB1YLR040C KRE33P53914 1056 aaKnown RBP5.13□□□□□ -1.59
AFB1YLR040C RGP1P16664 663 aa5.12□□□□□ -1.59
AFB1YLR040C ISC10P32645 267 aa5.12□□□□□ -1.59
AFB1YLR040C KAP122P32767 1081 aa5.12□□□□□ -1.59
AFB1YLR040C SPR3P41901 512 aa5.12□□□□□ -1.59
AFB1YLR040C MTO1P53070 669 aa5.12□□□□□ -1.59
AFB1YLR040C ADE12P80210 433 aaKnown RBP5.12□□□□□ -1.59
AFB1YLR040C RPL34AP87262 121 aaPredicted RBP5.12□□□□□ -1.59
AFB1YLR040C UTP4Q06679 776 aaKnown RBP5.12□□□□□ -1.59
AFB1YLR040C STB3Q12427 513 aa5.12□□□□□ -1.59
AFB1YLR040C MRPL33P20084 86 aa5.11□□□□□ -1.59
AFB1YLR040C VMA3P25515 160 aa5.11□□□□□ -1.59
AFB1YLR040C BOI1P38041 980 aaKnown RBP5.11□□□□□ -1.59
AFB1YLR040C CEM1P39525 442 aa5.11□□□□□ -1.59
AFB1YLR040C YGR035CP53222 116 aa5.11□□□□□ -1.59
AFB1YLR040C SYT1Q06836 1226 aa5.11□□□□□ -1.59
AFB1YLR040C NAB2P32505 525 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
AFB1YLR040C GEF1P37020 779 aa5.1□□□□□ -1.59
AFB1YLR040C QDR2P40474 542 aa5.1□□□□□ -1.59
AFB1YLR040C LYS5P50113 272 aa5.1□□□□□ -1.59
AFB1YLR040C BOL3P39724 118 aa5.09□□□□□ -1.59
AFB1YLR040C YDR461C-AQ2V2P7 80 aa5.09□□□□□ -1.59
AFB1YLR040C RPC31P17890 251 aa5.08□□□□□ -1.6
AFB1YLR040C TRK2P28584 889 aa5.08□□□□□ -1.6
AFB1YLR040C YNR040WP53736 256 aa5.08□□□□□ -1.6
AFB1YLR040C LSO1Q3E827 93 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms