RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W HAL5P38970 855 aaKnown RBP6.36□□□□□ -1.39
VMA5YKL080W DLD3P39976 496 aaKnown RBP6.36□□□□□ -1.39
VMA5YKL080W RIM21P48565 533 aa6.36□□□□□ -1.39
VMA5YKL080W SPT2P06843 333 aaPredicted RBP6.35□□□□□ -1.39
VMA5YKL080W NSG2P53898 299 aa6.35□□□□□ -1.39
VMA5YKL080W THI72Q08579 599 aa6.35□□□□□ -1.39
VMA5YKL080W CEM1P39525 442 aa6.34□□□□□ -1.39
VMA5YKL080W MSN5P52918 1224 aa6.34□□□□□ -1.39
VMA5YKL080W SYT1Q06836 1226 aa6.34□□□□□ -1.39
VMA5YKL080W RDS2P19541 446 aaKnown RBP6.33□□□□□ -1.4
VMA5YKL080W ATG3P40344 310 aa6.33□□□□□ -1.4
VMA5YKL080W UBP15P50101 1230 aa6.33□□□□□ -1.4
VMA5YKL080W RPP2BP02400 110 aaKnown RBP6.32□□□□□ -1.4
VMA5YKL080W DIT1P21623 536 aa6.32□□□□□ -1.4
VMA5YKL080W UTR2P32623 467 aa6.32□□□□□ -1.4
VMA5YKL080W MRX10Q05648 414 aa6.32□□□□□ -1.4
VMA5YKL080W AI1P03875 834 aa6.31□□□□□ -1.4
VMA5YKL080W KTR7P40504 517 aa6.31□□□□□ -1.4
VMA5YKL080W YMR265CQ03508 461 aaKnown RBP6.31□□□□□ -1.4
VMA5YKL080W HDA3Q06623 655 aa6.31□□□□□ -1.4
VMA5YKL080W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
VMA5YKL080W TBS1P38114 1094 aa6.3□□□□□ -1.4
VMA5YKL080W UTP7P40055 554 aaKnown RBP6.3□□□□□ -1.4
VMA5YKL080W CCT8P47079 568 aaKnown RBP6.29□□□□□ -1.4
VMA5YKL080W KRE33P53914 1056 aaKnown RBP6.29□□□□□ -1.4
VMA5YKL080W UTP13Q05946 817 aaKnown RBP6.29□□□□□ -1.4
VMA5YKL080W ADE12P80210 433 aaKnown RBP6.28□□□□□ -1.4
VMA5YKL080W YDR461C-AQ2V2P7 80 aa6.28□□□□□ -1.4
VMA5YKL080W SBE2P42223 864 aaKnown RBP6.27□□□□□ -1.41
VMA5YKL080W SHM1P37292 490 aaPredicted RBP6.26□□□□□ -1.41
VMA5YKL080W SLX8P40072 274 aa6.26□□□□□ -1.41
VMA5YKL080W PDI1P17967 522 aaKnown RBP6.25□□□□□ -1.41
VMA5YKL080W ALA1P40825 983 aaKnown RBP6.25□□□□□ -1.41
VMA5YKL080W SUM1P46676 1062 aa6.25□□□□□ -1.41
VMA5YKL080W AHP1P38013 176 aaKnown RBP6.23□□□□□ -1.41
VMA5YKL080W AIM9P40053 627 aaKnown RBP6.23□□□□□ -1.41
VMA5YKL080W JJJ2P46997 583 aa6.23□□□□□ -1.41
VMA5YKL080W IRE1P32361 1115 aa6.22□□□□□ -1.41
VMA5YKL080W PEP12P32854 288 aa6.22□□□□□ -1.41
VMA5YKL080W TDA6Q06466 467 aa6.22□□□□□ -1.41
VMA5YKL080W SWI5P08153 709 aa6.21□□□□□ -1.42
VMA5YKL080W NTH2P35172 780 aa6.21□□□□□ -1.42
VMA5YKL080W SKN7P38889 622 aa6.21□□□□□ -1.42
VMA5YKL080W YPR053CQ6Q5F3 151 aa6.21□□□□□ -1.42
VMA5YKL080W RPS31P05759 152 aaKnown RBP6.2□□□□□ -1.42
VMA5YKL080W CPS1P27614 576 aa6.2□□□□□ -1.42
VMA5YKL080W PSH1Q12161 406 aa6.2□□□□□ -1.42
VMA5YKL080W GPM1P00950 247 aaKnown RBP6.19□□□□□ -1.42
VMA5YKL080W RPS6AP0CX37 236 aaKnown RBP6.19□□□□□ -1.42
VMA5YKL080W RPS6BP0CX38 236 aaPredicted RBP6.19□□□□□ -1.42
VMA5YKL080W YFL034WP43564 1073 aa6.19□□□□□ -1.42
VMA5YKL080W TSC13Q99190 310 aa6.19□□□□□ -1.42
VMA5YKL080W TTI1P36097 1038 aa6.18□□□□□ -1.42
VMA5YKL080W YPQ2Q06328 317 aa6.18□□□□□ -1.42
VMA5YKL080W PDC6P26263 563 aaKnown RBP6.17□□□□□ -1.42
VMA5YKL080W MRPL16P38064 232 aa6.17□□□□□ -1.42
VMA5YKL080W ACS2P52910 683 aaKnown RBP6.17□□□□□ -1.42
VMA5YKL080W YCK2P23292 546 aaKnown RBP6.16□□□□□ -1.42
VMA5YKL080W MCX1P38323 520 aaPredicted RBP6.16□□□□□ -1.42
VMA5YKL080W ECM23Q02710 187 aa6.16□□□□□ -1.42
VMA5YKL080W YMR187CQ03236 431 aa6.16□□□□□ -1.42
VMA5YKL080W FPS1P23900 669 aa6.15□□□□□ -1.42
VMA5YKL080W TGL4P36165 910 aa6.15□□□□□ -1.42
VMA5YKL080W PHO87P25360 923 aa6.14□□□□□ -1.43
VMA5YKL080W NRD1P53617 575 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
VMA5YKL080W GAL2P13181 574 aa6.13□□□□□ -1.43
VMA5YKL080W SIS2P36024 562 aa6.13□□□□□ -1.43
VMA5YKL080W SPR3P41901 512 aa6.13□□□□□ -1.43
VMA5YKL080W YNR014WP53719 212 aa6.13□□□□□ -1.43
VMA5YKL080W YNL165WP53891 406 aa6.13□□□□□ -1.43
VMA5YKL080W CYT1P07143 309 aa6.12□□□□□ -1.43
VMA5YKL080W HAP4P14064 554 aa6.12□□□□□ -1.43
VMA5YKL080W STB3Q12427 513 aa6.12□□□□□ -1.43
VMA5YKL080W SLN1P39928 1220 aaPredicted RBP6.11□□□□□ -1.43
VMA5YKL080W ALD2P47771 506 aa6.11□□□□□ -1.43
VMA5YKL080W TY1A-DR2Q03964 440 aaKnown RBP6.11□□□□□ -1.43
VMA5YKL080W LEU1P07264 779 aaKnown RBP6.1□□□□□ -1.43
VMA5YKL080W UBX7P38349 436 aa6.1□□□□□ -1.43
VMA5YKL080W BOI2P39969 1040 aa6.1□□□□□ -1.43
VMA5YKL080W ROM1P53046 1155 aa6.1□□□□□ -1.43
VMA5YKL080W YDR215CQ12240 137 aa6.1□□□□□ -1.43
VMA5YKL080W PDC5P16467 563 aaKnown RBP6.09□□□□□ -1.43
VMA5YKL080W MSC7P38694 644 aa6.09□□□□□ -1.43
VMA5YKL080W PUP1P25043 261 aa6.08□□□□□ -1.44
VMA5YKL080W KNS1P32350 737 aaPredicted RBP6.08□□□□□ -1.44
VMA5YKL080W GAS4Q08271 471 aa6.08□□□□□ -1.44
VMA5YKL080W Q0182Q9ZZW1 134 aa6.08□□□□□ -1.44
VMA5YKL080W SSA4P22202 642 aaKnown RBP6.06□□□□□ -1.44
VMA5YKL080W AMN1P38285 549 aaPredicted RBP6.06□□□□□ -1.44
VMA5YKL080W YML083CQ04526 418 aa6.06□□□□□ -1.44
VMA5YKL080W MCA1Q08601 432 aa6.06□□□□□ -1.44
VMA5YKL080W RLF2Q12495 606 aa6.06□□□□□ -1.44
VMA5YKL080W SBP1P10080 294 aaKnown RBP6.05□□□□□ -1.44
VMA5YKL080W VAN1P23642 535 aa6.05□□□□□ -1.44
VMA5YKL080W MLF3P32047 452 aa6.05□□□□□ -1.44
VMA5YKL080W YTA6P40328 754 aa6.04□□□□□ -1.44
VMA5YKL080W MCM1P11746 286 aa6.03□□□□□ -1.44
VMA5YKL080W RGP1P16664 663 aa6.03□□□□□ -1.44
VMA5YKL080W NOB1Q08444 459 aaKnown RBP6.03□□□□□ -1.44
VMA5YKL080W NGR1P32831 672 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms