RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W DAL1P32375 460 aa2.69□□□□□ -1.98
APL1YJR005W VTC4P47075 721 aa2.69□□□□□ -1.98
APL1YJR005W RTG2P32608 588 aaKnown RBP2.69□□□□□ -1.98
APL1YJR005W SLX8P40072 274 aa2.69□□□□□ -1.98
APL1YJR005W CUZ1P53899 274 aa2.69□□□□□ -1.98
APL1YJR005W MRX10Q05648 414 aa2.69□□□□□ -1.98
APL1YJR005W YPP1P46951 817 aa2.68□□□□□ -1.98
APL1YJR005W SHM1P37292 490 aaPredicted RBP2.68□□□□□ -1.98
APL1YJR005W NSG2P53898 299 aa2.68□□□□□ -1.98
APL1YJR005W UTP13Q05946 817 aaKnown RBP2.68□□□□□ -1.98
APL1YJR005W SUM1P46676 1062 aa2.67□□□□□ -1.98
APL1YJR005W MSN5P52918 1224 aa2.67□□□□□ -1.98
APL1YJR005W SWI5P08153 709 aa2.66□□□□□ -1.98
APL1YJR005W TBS1P38114 1094 aa2.66□□□□□ -1.98
APL1YJR005W AIM9P40053 627 aaKnown RBP2.66□□□□□ -1.98
APL1YJR005W ALA1P40825 983 aaKnown RBP2.66□□□□□ -1.98
APL1YJR005W JJJ2P46997 583 aa2.66□□□□□ -1.98
APL1YJR005W RPP2BP02400 110 aaKnown RBP2.66□□□□□ -1.98
APL1YJR005W LEO1P38439 464 aa2.66□□□□□ -1.98
APL1YJR005W ATG3P40344 310 aa2.66□□□□□ -1.98
APL1YJR005W KTR7P40504 517 aa2.66□□□□□ -1.98
APL1YJR005W JJJ3P47138 172 aa2.66□□□□□ -1.98
APL1YJR005W UBP15P50101 1230 aa2.66□□□□□ -1.98
APL1YJR005W DMA2P53924 522 aa2.66□□□□□ -1.98
APL1YJR005W PDI1P17967 522 aaKnown RBP2.65□□□□□ -1.98
APL1YJR005W PEP12P32854 288 aa2.65□□□□□ -1.98
APL1YJR005W AHP1P38013 176 aaKnown RBP2.65□□□□□ -1.98
APL1YJR005W YNL165WP53891 406 aa2.65□□□□□ -1.98
APL1YJR005W RPS31P05759 152 aaKnown RBP2.65□□□□□ -1.99
APL1YJR005W IRE1P32361 1115 aa2.65□□□□□ -1.99
APL1YJR005W RPL34BP40525 121 aaKnown RBP2.65□□□□□ -1.99
APL1YJR005W YPQ2Q06328 317 aa2.65□□□□□ -1.99
APL1YJR005W PSH1Q12161 406 aa2.65□□□□□ -1.99
APL1YJR005W RPS6AP0CX37 236 aaKnown RBP2.64□□□□□ -1.99
APL1YJR005W RPS6BP0CX38 236 aaPredicted RBP2.64□□□□□ -1.99
APL1YJR005W DIT1P21623 536 aa2.64□□□□□ -1.99
APL1YJR005W NTH2P35172 780 aa2.64□□□□□ -1.99
APL1YJR005W LYS5P50113 272 aa2.64□□□□□ -1.99
APL1YJR005W CEM1P39525 442 aa2.63□□□□□ -1.99
APL1YJR005W KRE33P53914 1056 aaKnown RBP2.63□□□□□ -1.99
APL1YJR005W ADE12P80210 433 aaKnown RBP2.63□□□□□ -1.99
APL1YJR005W YMR265CQ03508 461 aaKnown RBP2.63□□□□□ -1.99
APL1YJR005W SYT1Q06836 1226 aa2.63□□□□□ -1.99
APL1YJR005W PDC6P26263 563 aaKnown RBP2.63□□□□□ -1.99
APL1YJR005W IRC24P40580 263 aa2.63□□□□□ -1.99
APL1YJR005W ACS2P52910 683 aaKnown RBP2.62□□□□□ -1.99
APL1YJR005W TSC13Q99190 310 aa2.62□□□□□ -1.99
APL1YJR005W MRPL16P38064 232 aa2.62□□□□□ -1.99
APL1YJR005W YFL066CP43538 392 aa2.62□□□□□ -1.99
APL1YJR005W ALD2P47771 506 aa2.62□□□□□ -1.99
APL1YJR005W MLF3P32047 452 aa2.61□□□□□ -1.99
APL1YJR005W SBE2P42223 864 aaKnown RBP2.61□□□□□ -1.99
APL1YJR005W HGH1P48362 394 aaKnown RBP2.61□□□□□ -1.99
APL1YJR005W THI72Q08579 599 aa2.61□□□□□ -1.99
APL1YJR005W STB3Q12427 513 aa2.61□□□□□ -1.99
APL1YJR005W CYT1P07143 309 aa2.6□□□□□ -1.99
APL1YJR005W YDR461C-AQ2V2P7 80 aa2.6□□□□□ -1.99
APL1YJR005W Q0182Q9ZZW1 134 aa2.6□□□□□ -1.99
APL1YJR005W SPR3P41901 512 aa2.6□□□□□ -1.99
APL1YJR005W YFL034WP43564 1073 aa2.6□□□□□ -1.99
APL1YJR005W ROM1P53046 1155 aa2.6□□□□□ -1.99
APL1YJR005W PHO87P25360 923 aa2.59□□□□□ -1.99
APL1YJR005W ECM23Q02710 187 aa2.59□□□□□ -1.99
APL1YJR005W LEU1P07264 779 aaKnown RBP2.59□□□□□ -2
APL1YJR005W MCM1P11746 286 aa2.59□□□□□ -2
APL1YJR005W FPS1P23900 669 aa2.59□□□□□ -2
APL1YJR005W CPS1P27614 576 aa2.59□□□□□ -2
APL1YJR005W TTI1P36097 1038 aa2.59□□□□□ -2
APL1YJR005W TGL4P36165 910 aa2.59□□□□□ -2
APL1YJR005W GPM1P00950 247 aaKnown RBP2.58□□□□□ -2
APL1YJR005W AI1P03875 834 aa2.58□□□□□ -2
APL1YJR005W GAL2P13181 574 aa2.58□□□□□ -2
APL1YJR005W MSC7P38694 644 aa2.58□□□□□ -2
APL1YJR005W TDA6Q06466 467 aa2.57□□□□□ -2
APL1YJR005W YPR053CQ6Q5F3 151 aa2.57□□□□□ -2
APL1YJR005W HAP4P14064 554 aa2.57□□□□□ -2
APL1YJR005W RGP1P16664 663 aa2.57□□□□□ -2
APL1YJR005W SUV3P32580 737 aa2.57□□□□□ -2
APL1YJR005W HXT5P38695 592 aa2.57□□□□□ -2
APL1YJR005W MTO1P53070 669 aa2.57□□□□□ -2
APL1YJR005W TY1A-DR2Q03964 440 aaKnown RBP2.57□□□□□ -2
APL1YJR005W GAS4Q08271 471 aa2.57□□□□□ -2
APL1YJR005W UBP1P25037 809 aa2.56□□□□□ -2
APL1YJR005W PDC5P16467 563 aaKnown RBP2.56□□□□□ -2
APL1YJR005W PUP1P25043 261 aa2.56□□□□□ -2
APL1YJR005W NGR1P32831 672 aaKnown RBP2.56□□□□□ -2
APL1YJR005W UBX7P38349 436 aa2.56□□□□□ -2
APL1YJR005W YTA6P40328 754 aa2.56□□□□□ -2
APL1YJR005W YNR014WP53719 212 aa2.56□□□□□ -2
APL1YJR005W YML083CQ04526 418 aa2.56□□□□□ -2
APL1YJR005W NAB2P32505 525 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
APL1YJR005W SIS2P36024 562 aa2.55□□□□□ -2
APL1YJR005W CAB1Q04430 367 aa2.55□□□□□ -2
APL1YJR005W YCK2P23292 546 aaKnown RBP2.54□□□□□ -2
APL1YJR005W YNR040WP53736 256 aa2.54□□□□□ -2
APL1YJR005W FOX2Q02207 900 aaKnown RBP2.54□□□□□ -2
APL1YJR005W CUS1Q02554 436 aaPredicted RBP2.54□□□□□ -2
APL1YJR005W SLN1P39928 1220 aaPredicted RBP2.54□□□□□ -2
APL1YJR005W BOI2P39969 1040 aa2.54□□□□□ -2
APL1YJR005W QDR2P40474 542 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms