RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	TBS1	P38114	1094 aa		4.65	□□□□□ -1.67
PAM16	YJL104W	SLN1	P39928	1220 aa	Predicted RBP	4.65	□□□□□ -1.67
PAM16	YJL104W	MCA1	Q08601	432 aa		4.65	□□□□□ -1.67
PAM16	YJL104W	SPT2	P06843	333 aa	Predicted RBP	4.64	□□□□□ -1.67
PAM16	YJL104W	KNS1	P32350	737 aa	Predicted RBP	4.64	□□□□□ -1.67
PAM16	YJL104W	ALA1	P40825	983 aa	Known RBP	4.64	□□□□□ -1.67
PAM16	YJL104W	MRX12	P47084	519 aa		4.64	□□□□□ -1.67
PAM16	YJL104W	IRC24	P40580	263 aa		4.63	□□□□□ -1.67
PAM16	YJL104W	JJJ2	P46997	583 aa		4.63	□□□□□ -1.67
PAM16	YJL104W	ISR1	Q06098	443 aa	Known RBP	4.63	□□□□□ -1.67
PAM16	YJL104W	SSA2	P10592	639 aa	Known RBP	4.62	□□□□□ -1.67
PAM16	YJL104W	PDC5	P16467	563 aa	Known RBP	4.62	□□□□□ -1.67
PAM16	YJL104W	DMA1	P38823	416 aa		4.61	□□□□□ -1.67
PAM16	YJL104W	UTP7	P40055	554 aa	Known RBP	4.61	□□□□□ -1.67
PAM16	YJL104W	IRE1	P32361	1115 aa		4.6	□□□□□ -1.67
PAM16	YJL104W	MRPL16	P38064	232 aa		4.6	□□□□□ -1.67
PAM16	YJL104W	SUM1	P46676	1062 aa		4.6	□□□□□ -1.67
PAM16	YJL104W	RPP1A	P05318	106 aa	Predicted RBP	4.59	□□□□□ -1.67
PAM16	YJL104W	STB3	Q12427	513 aa		4.59	□□□□□ -1.67
PAM16	YJL104W	YPL034W	Q03083	165 aa		4.58	□□□□□ -1.68
PAM16	YJL104W	OMA1	P36163	345 aa		4.57	□□□□□ -1.68
PAM16	YJL104W	APL6	P46682	809 aa		4.57	□□□□□ -1.68
PAM16	YJL104W	PRY1	P47032	299 aa		4.57	□□□□□ -1.68
PAM16	YJL104W	ALO1	P54783	526 aa	Known RBP	4.57	□□□□□ -1.68
PAM16	YJL104W	PDC6	P26263	563 aa	Known RBP	4.56	□□□□□ -1.68
PAM16	YJL104W	EMP47	P43555	445 aa		4.56	□□□□□ -1.68
PAM16	YJL104W	TY1A-DR2	Q03964	440 aa	Known RBP	4.55	□□□□□ -1.68
PAM16	YJL104W	PSH1	Q12161	406 aa		4.55	□□□□□ -1.68
PAM16	YJL104W	SPT5	P27692	1063 aa	Known RBP	4.54	□□□□□ -1.68
PAM16	YJL104W	SHM1	P37292	490 aa	Predicted RBP	4.54	□□□□□ -1.68
PAM16	YJL104W	TPS3	P38426	1054 aa	Known RBP	4.54	□□□□□ -1.68
PAM16	YJL104W	ATG3	P40344	310 aa		4.54	□□□□□ -1.68
PAM16	YJL104W	SPR3	P41901	512 aa		4.54	□□□□□ -1.68
PAM16	YJL104W	MCM16	Q12262	181 aa		4.54	□□□□□ -1.68
PAM16	YJL104W	SLX8	P40072	274 aa		4.53	□□□□□ -1.68
PAM16	YJL104W	INP52	P50942	1183 aa		4.53	□□□□□ -1.68
PAM16	YJL104W	ISF1	P32488	338 aa		4.52	□□□□□ -1.69
PAM16	YJL104W	CSE4	P36012	229 aa		4.52	□□□□□ -1.69
PAM16	YJL104W	HAL5	P38970	855 aa	Known RBP	4.52	□□□□□ -1.69
PAM16	YJL104W	NHA1	Q99271	985 aa		4.51	□□□□□ -1.69
PAM16	YJL104W	UTP13	Q05946	817 aa	Known RBP	4.5	□□□□□ -1.69
PAM16	YJL104W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
PAM16	YJL104W	YTA6	P40328	754 aa		4.48	□□□□□ -1.69
PAM16	YJL104W	TFB3	Q03290	321 aa		4.48	□□□□□ -1.69
PAM16	YJL104W	HDA3	Q06623	655 aa		4.48	□□□□□ -1.69
PAM16	YJL104W	LEU1	P07264	779 aa	Known RBP	4.47	□□□□□ -1.69
PAM16	YJL104W	ALG14	P38242	237 aa		4.47	□□□□□ -1.69
PAM16	YJL104W	SOH1	P38633	127 aa		4.47	□□□□□ -1.69
PAM16	YJL104W	MSC7	P38694	644 aa		4.47	□□□□□ -1.69
PAM16	YJL104W	BUD9	P53226	547 aa		4.47	□□□□□ -1.69
PAM16	YJL104W	HPC2	Q01448	625 aa		4.47	□□□□□ -1.69
PAM16	YJL104W	PGM2	P37012	569 aa	Known RBP	4.46	□□□□□ -1.7
PAM16	YJL104W	YPP1	P46951	817 aa		4.46	□□□□□ -1.7
PAM16	YJL104W	AVT1	P47082	602 aa		4.46	□□□□□ -1.7
PAM16	YJL104W	RPS31	P05759	152 aa	Known RBP	4.45	□□□□□ -1.7
PAM16	YJL104W	RGP1	P16664	663 aa		4.45	□□□□□ -1.7
PAM16	YJL104W	HEH2	Q03281	663 aa		4.45	□□□□□ -1.7
PAM16	YJL104W	AI3	P03877	415 aa		4.44	□□□□□ -1.7
PAM16	YJL104W	YPQ2	Q06328	317 aa		4.44	□□□□□ -1.7
PAM16	YJL104W	YBL036C	P38197	257 aa		4.43	□□□□□ -1.7
PAM16	YJL104W	ALD2	P47771	506 aa		4.43	□□□□□ -1.7
PAM16	YJL104W	PGM1	P33401	570 aa	Known RBP	4.42	□□□□□ -1.7
PAM16	YJL104W	SWI5	P08153	709 aa		4.41	□□□□□ -1.7
PAM16	YJL104W	MCM1	P11746	286 aa		4.41	□□□□□ -1.7
PAM16	YJL104W	SAC7	P17121	654 aa		4.41	□□□□□ -1.7
PAM16	YJL104W	YDJ1	P25491	409 aa	Known RBP	4.41	□□□□□ -1.7
PAM16	YJL104W	COQ2	P32378	372 aa		4.41	□□□□□ -1.7
PAM16	YJL104W	AOS1	Q06624	347 aa		4.41	□□□□□ -1.7
PAM16	YJL104W	MED7	Q08278	222 aa		4.41	□□□□□ -1.7
PAM16	YJL104W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
PAM16	YJL104W	KIN1	P13185	1064 aa		4.4	□□□□□ -1.71
PAM16	YJL104W	AIM9	P40053	627 aa	Known RBP	4.4	□□□□□ -1.71
PAM16	YJL104W	ARI1	P53111	347 aa	Known RBP	4.4	□□□□□ -1.71
PAM16	YJL104W	GIS4	Q04233	774 aa		4.4	□□□□□ -1.71
PAM16	YJL104W	NAR1	P23503	491 aa	Known RBP	4.39	□□□□□ -1.71
PAM16	YJL104W	LIP5	P32875	414 aa		4.39	□□□□□ -1.71
PAM16	YJL104W	KAE1	P36132	386 aa		4.39	□□□□□ -1.71
PAM16	YJL104W	SFA1	P32771	386 aa		4.38	□□□□□ -1.71
PAM16	YJL104W	NCL1	P38205	684 aa	Known RBP	4.38	□□□□□ -1.71
PAM16	YJL104W	PRK1	P40494	810 aa		4.38	□□□□□ -1.71
PAM16	YJL104W	YFL034W	P43564	1073 aa		4.38	□□□□□ -1.71
PAM16	YJL104W	RPS6A	P0CX37	236 aa	Known RBP	4.37	□□□□□ -1.71
PAM16	YJL104W	RPS6B	P0CX38	236 aa	Predicted RBP	4.37	□□□□□ -1.71
PAM16	YJL104W	MLF3	P32047	452 aa		4.37	□□□□□ -1.71
PAM16	YJL104W	YKR073C	P36153	106 aa		4.37	□□□□□ -1.71
PAM16	YJL104W	RRM3	P38766	723 aa		4.37	□□□□□ -1.71
PAM16	YJL104W	YNL165W	P53891	406 aa		4.37	□□□□□ -1.71
PAM16	YJL104W	ELM1	P32801	640 aa		4.36	□□□□□ -1.71
PAM16	YJL104W	TOS1	P38288	455 aa		4.35	□□□□□ -1.71
PAM16	YJL104W	BRL1	P38770	471 aa		4.35	□□□□□ -1.71
PAM16	YJL104W	GAS5	Q08193	484 aa		4.35	□□□□□ -1.71
PAM16	YJL104W	TRP3	P00937	484 aa		4.34	□□□□□ -1.71
PAM16	YJL104W	MTO1	P53070	669 aa		4.34	□□□□□ -1.71
PAM16	YJL104W	YLR122C	Q12312	125 aa		4.33	□□□□□ -1.72
PAM16	YJL104W	Q0182	Q9ZZW1	134 aa		4.33	□□□□□ -1.72
PAM16	YJL104W	RSC6	P25632	483 aa		4.32	□□□□□ -1.72
PAM16	YJL104W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.32	□□□□□ -1.72	not detected
PAM16	YJL104W	GUA1	P38625	525 aa	Known RBP	4.32	□□□□□ -1.72
PAM16	YJL104W	SKP1	P52286	194 aa		4.32	□□□□□ -1.72
PAM16	YJL104W	NTH2	P35172	780 aa		4.31	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 140.7 ms