RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	SUM1	P46676	1062 aa		7.43	□□□□□ -1.22
SPO11	YHL022C	VTC4	P47075	721 aa		7.43	□□□□□ -1.22
SPO11	YHL022C	CDC19	P00549	500 aa	Known RBP	7.42	□□□□□ -1.22
SPO11	YHL022C	NTH2	P35172	780 aa		7.42	□□□□□ -1.22
SPO11	YHL022C	TSC13	Q99190	310 aa		7.42	□□□□□ -1.22
SPO11	YHL022C	RPS6A	P0CX37	236 aa	Known RBP	7.41	□□□□□ -1.22
SPO11	YHL022C	RPS6B	P0CX38	236 aa	Predicted RBP	7.41	□□□□□ -1.22
SPO11	YHL022C	SIS2	P36024	562 aa		7.41	□□□□□ -1.22
SPO11	YHL022C	YFL034W	P43564	1073 aa		7.41	□□□□□ -1.22
SPO11	YHL022C	ROG3	P43602	733 aa		7.41	□□□□□ -1.22
SPO11	YHL022C	MSN5	P52918	1224 aa		7.41	□□□□□ -1.22
SPO11	YHL022C	TY1A-DR3	Q12441	440 aa		7.41	□□□□□ -1.22
SPO11	YHL022C	SLA1	P32790	1244 aa		7.4	□□□□□ -1.22
SPO11	YHL022C	ALA1	P40825	983 aa	Known RBP	7.4	□□□□□ -1.22
SPO11	YHL022C	ACS2	P52910	683 aa	Known RBP	7.4	□□□□□ -1.22
SPO11	YHL022C	NAM8	Q00539	523 aa	Known RBP	7.4	□□□□□ -1.22
SPO11	YHL022C	TY1A-MR1	Q04215	440 aa		7.4	□□□□□ -1.22
SPO11	YHL022C	PHO87	P25360	923 aa		7.39	□□□□□ -1.23
SPO11	YHL022C	TGL4	P36165	910 aa		7.39	□□□□□ -1.23
SPO11	YHL022C	GAL2	P13181	574 aa		7.38	□□□□□ -1.23
SPO11	YHL022C	YPQ2	Q06328	317 aa		7.38	□□□□□ -1.23
SPO11	YHL022C	CCP1	P00431	361 aa		7.37	□□□□□ -1.23
SPO11	YHL022C	SHM1	P37292	490 aa	Predicted RBP	7.36	□□□□□ -1.23
SPO11	YHL022C	ECM23	Q02710	187 aa		7.36	□□□□□ -1.23
SPO11	YHL022C	HAP4	P14064	554 aa		7.35	□□□□□ -1.23
SPO11	YHL022C	AHP1	P38013	176 aa	Known RBP	7.35	□□□□□ -1.23
SPO11	YHL022C	JJJ2	P46997	583 aa		7.35	□□□□□ -1.23
SPO11	YHL022C	CYT1	P07143	309 aa		7.34	□□□□□ -1.23
SPO11	YHL022C	ROM1	P53046	1155 aa		7.34	□□□□□ -1.23
SPO11	YHL022C	PUP1	P25043	261 aa		7.33	□□□□□ -1.24
SPO11	YHL022C	UBP15	P50101	1230 aa		7.33	□□□□□ -1.24
SPO11	YHL022C	RLF2	Q12495	606 aa		7.33	□□□□□ -1.24
SPO11	YHL022C	IRE1	P32361	1115 aa		7.32	□□□□□ -1.24
SPO11	YHL022C	HPF1	Q05164	967 aa		7.32	□□□□□ -1.24
SPO11	YHL022C	GAS4	Q08271	471 aa		7.32	□□□□□ -1.24
SPO11	YHL022C	RPS31	P05759	152 aa	Known RBP	7.31	□□□□□ -1.24
SPO11	YHL022C	UBX7	P38349	436 aa		7.3	□□□□□ -1.24
SPO11	YHL022C	YGR035C	P53222	116 aa		7.3	□□□□□ -1.24
SPO11	YHL022C	YNL165W	P53891	406 aa		7.3	□□□□□ -1.24
SPO11	YHL022C	CUZ1	P53899	274 aa		7.3	□□□□□ -1.24
SPO11	YHL022C	MCM1	P11746	286 aa		7.29	□□□□□ -1.24
SPO11	YHL022C	YML083C	Q04526	418 aa		7.29	□□□□□ -1.24
SPO11	YHL022C	PSH1	Q12161	406 aa		7.29	□□□□□ -1.24
SPO11	YHL022C	SSA4	P22202	642 aa	Known RBP	7.28	□□□□□ -1.24
SPO11	YHL022C	UBP1	P25037	809 aa		7.27	□□□□□ -1.25
SPO11	YHL022C	PDC6	P26263	563 aa	Known RBP	7.27	□□□□□ -1.25
SPO11	YHL022C	NOB1	Q08444	459 aa	Known RBP	7.27	□□□□□ -1.25
SPO11	YHL022C	Q0182	Q9ZZW1	134 aa		7.26	□□□□□ -1.25
SPO11	YHL022C	VAN1	P23642	535 aa		7.25	□□□□□ -1.25
SPO11	YHL022C	MLF3	P32047	452 aa		7.25	□□□□□ -1.25
SPO11	YHL022C	YMR265C	Q03508	461 aa	Known RBP	7.25	□□□□□ -1.25
SPO11	YHL022C	DIT1	P21623	536 aa		7.24	□□□□□ -1.25
SPO11	YHL022C	NGR1	P32831	672 aa	Known RBP	7.24	□□□□□ -1.25
SPO11	YHL022C	TRK2	P28584	889 aa		7.23	□□□□□ -1.25
SPO11	YHL022C	SUV3	P32580	737 aa		7.23	□□□□□ -1.25
SPO11	YHL022C	CEM1	P39525	442 aa		7.22	□□□□□ -1.25
SPO11	YHL022C	LYS5	P50113	272 aa		7.22	□□□□□ -1.25
SPO11	YHL022C	KRE33	P53914	1056 aa	Known RBP	7.22	□□□□□ -1.25
SPO11	YHL022C	LEU1	P07264	779 aa	Known RBP	7.21	□□□□□ -1.26
SPO11	YHL022C	MRPL16	P38064	232 aa		7.21	□□□□□ -1.26
SPO11	YHL022C	HXT5	P38695	592 aa		7.21	□□□□□ -1.26
SPO11	YHL022C	ALD2	P47771	506 aa		7.21	□□□□□ -1.26
SPO11	YHL022C	SUB2	Q07478	446 aa	Known RBP	7.21	□□□□□ -1.26
SPO11	YHL022C	YTA6	P40328	754 aa		7.2	□□□□□ -1.26
SPO11	YHL022C	ADE12	P80210	433 aa	Known RBP	7.2	□□□□□ -1.26
SPO11	YHL022C	STB3	Q12427	513 aa		7.2	□□□□□ -1.26
SPO11	YHL022C	DPH6	Q12429	685 aa		7.2	□□□□□ -1.26
SPO11	YHL022C	TRS33	Q99394	268 aa		7.2	□□□□□ -1.26
SPO11	YHL022C	JJJ3	P47138	172 aa		7.19	□□□□□ -1.26
SPO11	YHL022C	SYT1	Q06836	1226 aa		7.19	□□□□□ -1.26
SPO11	YHL022C	CWH41	P53008	833 aa		7.17	□□□□□ -1.26
SPO11	YHL022C	SCD5	P34758	872 aa		7.16	□□□□□ -1.26
SPO11	YHL022C	SPR3	P41901	512 aa		7.16	□□□□□ -1.26
SPO11	YHL022C	MTO1	P53070	669 aa		7.16	□□□□□ -1.26
SPO11	YHL022C	CAB1	Q04430	367 aa		7.16	□□□□□ -1.26
SPO11	YHL022C	YDR461C-A	Q2V2P7	80 aa		7.16	□□□□□ -1.26
SPO11	YHL022C	RGP1	P16664	663 aa		7.15	□□□□□ -1.26
SPO11	YHL022C	ALD4	P46367	519 aa	Known RBP	7.15	□□□□□ -1.26
SPO11	YHL022C	FOX2	Q02207	900 aa	Known RBP	7.15	□□□□□ -1.26
SPO11	YHL022C	PUF6	Q04373	656 aa	Known RBP	7.15	□□□□□ -1.26
SPO11	YHL022C	PUN1	Q06991	263 aa		7.15	□□□□□ -1.26
SPO11	YHL022C	CWC15	Q03772	175 aa	Known RBP	7.14	□□□□□ -1.27
SPO11	YHL022C	UTP4	Q06679	776 aa	Known RBP	7.14	□□□□□ -1.27
SPO11	YHL022C	FPS1	P23900	669 aa		7.13	□□□□□ -1.27
SPO11	YHL022C	YBR197C	P38306	217 aa		7.13	□□□□□ -1.27
SPO11	YHL022C	TPS3	P38426	1054 aa	Known RBP	7.13	□□□□□ -1.27
SPO11	YHL022C	KAP122	P32767	1081 aa		7.11	□□□□□ -1.27
SPO11	YHL022C	QDR2	P40474	542 aa		7.11	□□□□□ -1.27
SPO11	YHL022C	SRS2	P12954	1174 aa		7.1	□□□□□ -1.27
SPO11	YHL022C	MRPL33	P20084	86 aa		7.1	□□□□□ -1.27
SPO11	YHL022C	ISC10	P32645	267 aa		7.1	□□□□□ -1.27
SPO11	YHL022C	VMA3	P25515	160 aa		7.08	□□□□□ -1.28
SPO11	YHL022C	MSC7	P38694	644 aa		7.08	□□□□□ -1.28
SPO11	YHL022C	CUS1	Q02554	436 aa	Predicted RBP	7.08	□□□□□ -1.28
SPO11	YHL022C	MTC5	Q03897	1148 aa		7.08	□□□□□ -1.28
SPO11	YHL022C	TY1A-DR2	Q03964	440 aa	Known RBP	7.08	□□□□□ -1.28
SPO11	YHL022C	RPC31	P17890	251 aa		7.07	□□□□□ -1.28
SPO11	YHL022C	MDJ1	P35191	511 aa		7.07	□□□□□ -1.28
SPO11	YHL022C	PNP1	Q05788	311 aa		7.07	□□□□□ -1.28
SPO11	YHL022C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.06	□□□□□ -1.28	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms