RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W TDA6Q06466 467 aa5.98□□□□□ -1.45
RTT102YGR275W YDR461C-AQ2V2P7 80 aa5.98□□□□□ -1.45
RTT102YGR275W NRD1P53617 575 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
RTT102YGR275W YNR014WP53719 212 aa5.96□□□□□ -1.46
RTT102YGR275W SOH1P38633 127 aa5.95□□□□□ -1.46
RTT102YGR275W BRL1P38770 471 aa5.95□□□□□ -1.46
RTT102YGR275W SUM1P46676 1062 aa5.95□□□□□ -1.46
RTT102YGR275W SBP1P10080 294 aaKnown RBP5.94□□□□□ -1.46
RTT102YGR275W JJJ2P46997 583 aa5.94□□□□□ -1.46
RTT102YGR275W YMR187CQ03236 431 aa5.94□□□□□ -1.46
RTT102YGR275W LEU3P08638 886 aa5.93□□□□□ -1.46
RTT102YGR275W ATG3P40344 310 aa5.93□□□□□ -1.46
RTT102YGR275W RQC2Q12532 1038 aaKnown RBP5.93□□□□□ -1.46
RTT102YGR275W FPS1P23900 669 aa5.92□□□□□ -1.46
RTT102YGR275W IRE1P32361 1115 aa5.92□□□□□ -1.46
RTT102YGR275W SLX8P40072 274 aa5.92□□□□□ -1.46
RTT102YGR275W HPC2Q01448 625 aa5.92□□□□□ -1.46
RTT102YGR275W HDA3Q06623 655 aa5.92□□□□□ -1.46
RTT102YGR275W RPN1P38764 993 aaKnown RBP5.91□□□□□ -1.46
RTT102YGR275W TFB3Q03290 321 aa5.91□□□□□ -1.46
RTT102YGR275W SHM1P37292 490 aaPredicted RBP5.9□□□□□ -1.46
RTT102YGR275W SKN7P38889 622 aa5.9□□□□□ -1.46
RTT102YGR275W YPP1P46951 817 aa5.9□□□□□ -1.46
RTT102YGR275W GPM1P00950 247 aaKnown RBP5.89□□□□□ -1.47
RTT102YGR275W BIO2P32451 375 aa5.89□□□□□ -1.47
RTT102YGR275W MRPL16P38064 232 aa5.89□□□□□ -1.47
RTT102YGR275W UTP13Q05946 817 aaKnown RBP5.89□□□□□ -1.47
RTT102YGR275W STB3Q12427 513 aa5.89□□□□□ -1.47
RTT102YGR275W PKC1P24583 1151 aa5.88□□□□□ -1.47
RTT102YGR275W BOI2P39969 1040 aa5.88□□□□□ -1.47
RTT102YGR275W PDC6P26263 563 aaKnown RBP5.87□□□□□ -1.47
RTT102YGR275W PSH1Q12161 406 aa5.87□□□□□ -1.47
RTT102YGR275W MCX1P38323 520 aaPredicted RBP5.86□□□□□ -1.47
RTT102YGR275W YNL108CP53929 270 aa5.86□□□□□ -1.47
RTT102YGR275W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
RTT102YGR275W ENO2P00925 437 aaKnown RBP5.85□□□□□ -1.47
RTT102YGR275W YCK2P23292 546 aaKnown RBP5.83□□□□□ -1.48
RTT102YGR275W MET1P36150 593 aa5.83□□□□□ -1.48
RTT102YGR275W YDR215CQ12240 137 aa5.83□□□□□ -1.48
RTT102YGR275W SWI5P08153 709 aa5.82□□□□□ -1.48
RTT102YGR275W PDC5P16467 563 aaKnown RBP5.82□□□□□ -1.48
RTT102YGR275W AIM9P40053 627 aaKnown RBP5.82□□□□□ -1.48
RTT102YGR275W SUP45P12385 437 aaKnown RBP5.81□□□□□ -1.48
RTT102YGR275W KNS1P32350 737 aaPredicted RBP5.81□□□□□ -1.48
RTT102YGR275W SLN1P39928 1220 aaPredicted RBP5.81□□□□□ -1.48
RTT102YGR275W YPQ2Q06328 317 aa5.81□□□□□ -1.48
RTT102YGR275W RPS31P05759 152 aaKnown RBP5.8□□□□□ -1.48
RTT102YGR275W SPR3P41901 512 aa5.8□□□□□ -1.48
RTT102YGR275W MCA1Q08601 432 aa5.8□□□□□ -1.48
RTT102YGR275W RIM21P48565 533 aa5.79□□□□□ -1.48
RTT102YGR275W TY1A-DR2Q03964 440 aaKnown RBP5.79□□□□□ -1.48
RTT102YGR275W RPS6AP0CX37 236 aaKnown RBP5.78□□□□□ -1.48
RTT102YGR275W RPS6BP0CX38 236 aaPredicted RBP5.78□□□□□ -1.48
RTT102YGR275W TAT1P38085 619 aa5.78□□□□□ -1.48
RTT102YGR275W YTA6P40328 754 aa5.78□□□□□ -1.48
RTT102YGR275W LEU1P07264 779 aaKnown RBP5.77□□□□□ -1.49
RTT102YGR275W AMN1P38285 549 aaPredicted RBP5.77□□□□□ -1.49
RTT102YGR275W RDS2P19541 446 aaKnown RBP5.76□□□□□ -1.49
RTT102YGR275W YFL034WP43564 1073 aa5.76□□□□□ -1.49
RTT102YGR275W YJL007CP47080 104 aa5.76□□□□□ -1.49
RTT102YGR275W YNL165WP53891 406 aa5.76□□□□□ -1.49
RTT102YGR275W RPP1AP05318 106 aaPredicted RBP5.75□□□□□ -1.49
RTT102YGR275W LSB6P42951 607 aa5.75□□□□□ -1.49
RTT102YGR275W PRY1P47032 299 aa5.75□□□□□ -1.49
RTT102YGR275W ALD2P47771 506 aa5.75□□□□□ -1.49
RTT102YGR275W RGP1P16664 663 aa5.74□□□□□ -1.49
RTT102YGR275W MLF3P32047 452 aa5.74□□□□□ -1.49
RTT102YGR275W NTH2P35172 780 aa5.74□□□□□ -1.49
RTT102YGR275W MCM1P11746 286 aa5.73□□□□□ -1.49
RTT102YGR275W MSC7P38694 644 aa5.73□□□□□ -1.49
RTT102YGR275W PDI1P17967 522 aaKnown RBP5.72□□□□□ -1.49
RTT102YGR275W Q0182Q9ZZW1 134 aa5.71□□□□□ -1.5
RTT102YGR275W MAC1P35192 417 aa5.7□□□□□ -1.5
RTT102YGR275W ENO1P00924 437 aaKnown RBP5.69□□□□□ -1.5
RTT102YGR275W ALG14P38242 237 aa5.68□□□□□ -1.5
RTT102YGR275W MTO1P53070 669 aa5.68□□□□□ -1.5
RTT102YGR275W TSC13Q99190 310 aa5.68□□□□□ -1.5
RTT102YGR275W CYT1P07143 309 aa5.67□□□□□ -1.5
RTT102YGR275W PGM2P37012 569 aaKnown RBP5.67□□□□□ -1.5
RTT102YGR275W TPS3P38426 1054 aaKnown RBP5.67□□□□□ -1.5
RTT102YGR275W YPL034WQ03083 165 aa5.67□□□□□ -1.5
RTT102YGR275W MRX10Q05648 414 aa5.67□□□□□ -1.5
RTT102YGR275W NHA1Q99271 985 aa5.67□□□□□ -1.5
RTT102YGR275W RPL34BP40525 121 aaKnown RBP5.66□□□□□ -1.5
RTT102YGR275W RTG2P32608 588 aaKnown RBP5.65□□□□□ -1.5
RTT102YGR275W BIM1P40013 344 aa5.65□□□□□ -1.5
RTT102YGR275W ATG32P40458 529 aa5.65□□□□□ -1.5
RTT102YGR275W ALO1P54783 526 aaKnown RBP5.65□□□□□ -1.5
RTT102YGR275W HEH2Q03281 663 aa5.65□□□□□ -1.5
RTT102YGR275W TIF1P10081 395 aaKnown RBP5.64□□□□□ -1.51
RTT102YGR275W NCL1P38205 684 aaKnown RBP5.63□□□□□ -1.51
RTT102YGR275W PRK1P40494 810 aa5.63□□□□□ -1.51
RTT102YGR275W KTR7P40504 517 aa5.63□□□□□ -1.51
RTT102YGR275W BUD9P53226 547 aa5.62□□□□□ -1.51
RTT102YGR275W NAR1P23503 491 aaKnown RBP5.61□□□□□ -1.51
RTT102YGR275W GLT1Q12680 2145 aaKnown RBP5.6□□□□□ -1.51
RTT102YGR275W OMA1P36163 345 aa5.6□□□□□ -1.51
RTT102YGR275W ACS2P52910 683 aaKnown RBP5.6□□□□□ -1.51
RTT102YGR275W CUS1Q02554 436 aaPredicted RBP5.6□□□□□ -1.51
RTT102YGR275W GIS4Q04233 774 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms