RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W TBS1P38114 1094 aa6.97□□□□□ -1.29
PTI1YGR156W UTP7P40055 554 aaKnown RBP6.97□□□□□ -1.29
PTI1YGR156W ATG3P40344 310 aa6.97□□□□□ -1.29
PTI1YGR156W YDJ1P25491 409 aaKnown RBP6.96□□□□□ -1.3
PTI1YGR156W TDA6Q06466 467 aa6.96□□□□□ -1.3
PTI1YGR156W SPT2P06843 333 aaPredicted RBP6.95□□□□□ -1.3
PTI1YGR156W YPP1P46951 817 aa6.95□□□□□ -1.3
PTI1YGR156W TFB3Q03290 321 aa6.95□□□□□ -1.3
PTI1YGR156W ALA1P40825 983 aaKnown RBP6.94□□□□□ -1.3
PTI1YGR156W YNR014WP53719 212 aa6.94□□□□□ -1.3
PTI1YGR156W APL6P46682 809 aa6.93□□□□□ -1.3
PTI1YGR156W YMR187CQ03236 431 aa6.93□□□□□ -1.3
PTI1YGR156W YDR461C-AQ2V2P7 80 aa6.93□□□□□ -1.3
PTI1YGR156W SKN7P38889 622 aa6.92□□□□□ -1.3
PTI1YGR156W HAL5P38970 855 aaKnown RBP6.91□□□□□ -1.3
PTI1YGR156W PKC1P24583 1151 aa6.9□□□□□ -1.3
PTI1YGR156W UTP13Q05946 817 aaKnown RBP6.9□□□□□ -1.3
PTI1YGR156W SOH1P38633 127 aa6.89□□□□□ -1.31
PTI1YGR156W SUM1P46676 1062 aa6.87□□□□□ -1.31
PTI1YGR156W HDA3Q06623 655 aa6.87□□□□□ -1.31
PTI1YGR156W FPS1P23900 669 aa6.86□□□□□ -1.31
PTI1YGR156W JJJ2P46997 583 aa6.86□□□□□ -1.31
PTI1YGR156W YNL108CP53929 270 aa6.86□□□□□ -1.31
PTI1YGR156W SUP45P12385 437 aaKnown RBP6.85□□□□□ -1.31
PTI1YGR156W GPM1P00950 247 aaKnown RBP6.84□□□□□ -1.31
PTI1YGR156W IRE1P32361 1115 aa6.84□□□□□ -1.31
PTI1YGR156W BOI2P39969 1040 aa6.84□□□□□ -1.31
PTI1YGR156W BIO2P32451 375 aa6.83□□□□□ -1.32
PTI1YGR156W SHM1P37292 490 aaPredicted RBP6.83□□□□□ -1.32
PTI1YGR156W SLX8P40072 274 aa6.83□□□□□ -1.32
PTI1YGR156W ENO2P00925 437 aaKnown RBP6.82□□□□□ -1.32
PTI1YGR156W HGH1P48362 394 aaKnown RBP6.82□□□□□ -1.32
PTI1YGR156W MRPL16P38064 232 aa6.81□□□□□ -1.32
PTI1YGR156W MCX1P38323 520 aaPredicted RBP6.81□□□□□ -1.32
PTI1YGR156W YJL007CP47080 104 aa6.81□□□□□ -1.32
PTI1YGR156W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
PTI1YGR156W STB3Q12427 513 aa6.81□□□□□ -1.32
PTI1YGR156W YCK2P23292 546 aaKnown RBP6.8□□□□□ -1.32
PTI1YGR156W PSH1Q12161 406 aa6.8□□□□□ -1.32
PTI1YGR156W PDC6P26263 563 aaKnown RBP6.78□□□□□ -1.32
PTI1YGR156W SLN1P39928 1220 aaPredicted RBP6.78□□□□□ -1.32
PTI1YGR156W YFL034WP43564 1073 aa6.77□□□□□ -1.33
PTI1YGR156W MCA1Q08601 432 aa6.77□□□□□ -1.33
PTI1YGR156W YDR215CQ12240 137 aa6.77□□□□□ -1.33
PTI1YGR156W RIM21P48565 533 aa6.76□□□□□ -1.33
PTI1YGR156W SWI5P08153 709 aa6.75□□□□□ -1.33
PTI1YGR156W MET1P36150 593 aa6.75□□□□□ -1.33
PTI1YGR156W AIM9P40053 627 aaKnown RBP6.75□□□□□ -1.33
PTI1YGR156W PDC5P16467 563 aaKnown RBP6.74□□□□□ -1.33
PTI1YGR156W AMN1P38285 549 aaPredicted RBP6.73□□□□□ -1.33
PTI1YGR156W SPR3P41901 512 aa6.73□□□□□ -1.33
PTI1YGR156W KNS1P32350 737 aaPredicted RBP6.72□□□□□ -1.33
PTI1YGR156W TAT1P38085 619 aa6.72□□□□□ -1.33
PTI1YGR156W RPL34BP40525 121 aaKnown RBP6.72□□□□□ -1.33
PTI1YGR156W RPP1AP05318 106 aaPredicted RBP6.71□□□□□ -1.34
PTI1YGR156W RPS31P05759 152 aaKnown RBP6.71□□□□□ -1.34
PTI1YGR156W TY1A-DR2Q03964 440 aaKnown RBP6.71□□□□□ -1.34
PTI1YGR156W RPS6AP0CX37 236 aaKnown RBP6.7□□□□□ -1.34
PTI1YGR156W RPS6BP0CX38 236 aaPredicted RBP6.7□□□□□ -1.34
PTI1YGR156W RDS2P19541 446 aaKnown RBP6.7□□□□□ -1.34
PTI1YGR156W NTH2P35172 780 aa6.7□□□□□ -1.34
PTI1YGR156W BIM1P40013 344 aa6.7□□□□□ -1.34
PTI1YGR156W YTA6P40328 754 aa6.7□□□□□ -1.34
PTI1YGR156W LSB6P42951 607 aa6.7□□□□□ -1.34
PTI1YGR156W YPQ2Q06328 317 aa6.7□□□□□ -1.34
PTI1YGR156W RTG2P32608 588 aaKnown RBP6.69□□□□□ -1.34
PTI1YGR156W PRY1P47032 299 aa6.69□□□□□ -1.34
PTI1YGR156W GLT1Q12680 2145 aaKnown RBP6.68□□□□□ -1.34
PTI1YGR156W PDI1P17967 522 aaKnown RBP6.68□□□□□ -1.34
PTI1YGR156W TAF7Q05021 590 aa6.68□□□□□ -1.34
PTI1YGR156W TSC13Q99190 310 aa6.68□□□□□ -1.34
PTI1YGR156W TIF1P10081 395 aaKnown RBP6.67□□□□□ -1.34
PTI1YGR156W MRX10Q05648 414 aa6.67□□□□□ -1.34
PTI1YGR156W ENO1P00924 437 aaKnown RBP6.66□□□□□ -1.34
PTI1YGR156W MCM1P11746 286 aa6.66□□□□□ -1.34
PTI1YGR156W ATG32P40458 529 aa6.66□□□□□ -1.34
PTI1YGR156W YNL165WP53891 406 aa6.66□□□□□ -1.34
PTI1YGR156W LEU1P07264 779 aaKnown RBP6.65□□□□□ -1.34
PTI1YGR156W MAC1P35192 417 aa6.65□□□□□ -1.34
PTI1YGR156W ALD2P47771 506 aa6.65□□□□□ -1.34
PTI1YGR156W LEO1P38439 464 aa6.64□□□□□ -1.35
PTI1YGR156W MSC7P38694 644 aa6.63□□□□□ -1.35
PTI1YGR156W RGP1P16664 663 aa6.62□□□□□ -1.35
PTI1YGR156W MLF3P32047 452 aa6.62□□□□□ -1.35
PTI1YGR156W Q0182Q9ZZW1 134 aa6.62□□□□□ -1.35
PTI1YGR156W CYT1P07143 309 aa6.61□□□□□ -1.35
PTI1YGR156W ALO1P54783 526 aaKnown RBP6.59□□□□□ -1.35
PTI1YGR156W YPL034WQ03083 165 aa6.59□□□□□ -1.35
PTI1YGR156W PEP12P32854 288 aa6.58□□□□□ -1.36
PTI1YGR156W ALG14P38242 237 aa6.58□□□□□ -1.36
PTI1YGR156W HAP4P14064 554 aa6.57□□□□□ -1.36
PTI1YGR156W PGM2P37012 569 aaKnown RBP6.57□□□□□ -1.36
PTI1YGR156W KTR7P40504 517 aa6.57□□□□□ -1.36
PTI1YGR156W IRC24P40580 263 aa6.57□□□□□ -1.36
PTI1YGR156W HEH2Q03281 663 aa6.57□□□□□ -1.36
PTI1YGR156W NHA1Q99271 985 aa6.57□□□□□ -1.36
PTI1YGR156W PHO87P25360 923 aa6.56□□□□□ -1.36
PTI1YGR156W TPS3P38426 1054 aaKnown RBP6.56□□□□□ -1.36
PTI1YGR156W MTO1P53070 669 aa6.56□□□□□ -1.36
PTI1YGR156W SIS2P36024 562 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms