RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W SPT2P06843 333 aaPredicted RBP5.61□□□□□ -1.51
PEX4YGR133W NAF1P53919 492 aaKnown RBP5.61□□□□□ -1.51
PEX4YGR133W ALA1P40825 983 aaKnown RBP5.6□□□□□ -1.51
PEX4YGR133W LSB6P42951 607 aa5.6□□□□□ -1.51
PEX4YGR133W ISF1P32488 338 aa5.59□□□□□ -1.51
PEX4YGR133W EMP47P43555 445 aa5.58□□□□□ -1.52
PEX4YGR133W JJJ2P46997 583 aa5.58□□□□□ -1.52
PEX4YGR133W IRE1P32361 1115 aa5.57□□□□□ -1.52
PEX4YGR133W SHM1P37292 490 aaPredicted RBP5.57□□□□□ -1.52
PEX4YGR133W MRPL16P38064 232 aa5.57□□□□□ -1.52
PEX4YGR133W TAT1P38085 619 aa5.57□□□□□ -1.52
PEX4YGR133W TBS1P38114 1094 aa5.57□□□□□ -1.52
PEX4YGR133W HAL5P38970 855 aaKnown RBP5.57□□□□□ -1.52
PEX4YGR133W MAC1P35192 417 aa5.56□□□□□ -1.52
PEX4YGR133W MET1P36150 593 aa5.56□□□□□ -1.52
PEX4YGR133W SUM1P46676 1062 aa5.56□□□□□ -1.52
PEX4YGR133W APL6P46682 809 aa5.56□□□□□ -1.52
PEX4YGR133W PRY1P47032 299 aa5.56□□□□□ -1.52
PEX4YGR133W PDC5P16467 563 aaKnown RBP5.55□□□□□ -1.52
PEX4YGR133W PSH1Q12161 406 aa5.54□□□□□ -1.52
PEX4YGR133W STB3Q12427 513 aa5.54□□□□□ -1.52
PEX4YGR133W SSA2P10592 639 aaKnown RBP5.53□□□□□ -1.52
PEX4YGR133W KNS1P32350 737 aaPredicted RBP5.53□□□□□ -1.52
PEX4YGR133W PDC6P26263 563 aaKnown RBP5.52□□□□□ -1.53
PEX4YGR133W MRX12P47084 519 aa5.52□□□□□ -1.53
PEX4YGR133W MCM16Q12262 181 aa5.52□□□□□ -1.53
PEX4YGR133W SLX8P40072 274 aa5.51□□□□□ -1.53
PEX4YGR133W ALO1P54783 526 aaKnown RBP5.51□□□□□ -1.53
PEX4YGR133W TY1A-DR2Q03964 440 aaKnown RBP5.51□□□□□ -1.53
PEX4YGR133W YPL034WQ03083 165 aa5.5□□□□□ -1.53
PEX4YGR133W SPR3P41901 512 aa5.49□□□□□ -1.53
PEX4YGR133W HDA3Q06623 655 aa5.47□□□□□ -1.53
PEX4YGR133W RPS31P05759 152 aaKnown RBP5.46□□□□□ -1.54
PEX4YGR133W YDJ1P25491 409 aaKnown RBP5.46□□□□□ -1.54
PEX4YGR133W SOH1P38633 127 aa5.46□□□□□ -1.54
PEX4YGR133W OMA1P36163 345 aa5.45□□□□□ -1.54
PEX4YGR133W CSE4P36012 229 aa5.44□□□□□ -1.54
PEX4YGR133W MSC7P38694 644 aa5.44□□□□□ -1.54
PEX4YGR133W IRC24P40580 263 aa5.43□□□□□ -1.54
PEX4YGR133W INP52P50942 1183 aa5.42□□□□□ -1.54
PEX4YGR133W LEU1P07264 779 aaKnown RBP5.41□□□□□ -1.54
PEX4YGR133W KIN1P13185 1064 aa5.41□□□□□ -1.54
PEX4YGR133W SPT5P27692 1063 aaKnown RBP5.41□□□□□ -1.54
PEX4YGR133W TPS3P38426 1054 aaKnown RBP5.4□□□□□ -1.54
PEX4YGR133W ALD2P47771 506 aa5.4□□□□□ -1.54
PEX4YGR133W HPC2Q01448 625 aa5.4□□□□□ -1.54
PEX4YGR133W YPQ2Q06328 317 aa5.4□□□□□ -1.54
PEX4YGR133W YBL036CP38197 257 aa5.39□□□□□ -1.55
PEX4YGR133W BUD9P53226 547 aa5.39□□□□□ -1.55
PEX4YGR133W UTP13Q05946 817 aaKnown RBP5.39□□□□□ -1.55
PEX4YGR133W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
PEX4YGR133W PGM2P37012 569 aaKnown RBP5.38□□□□□ -1.55
PEX4YGR133W YNL165WP53891 406 aa5.38□□□□□ -1.55
PEX4YGR133W SWI5P08153 709 aa5.37□□□□□ -1.55
PEX4YGR133W RGP1P16664 663 aa5.37□□□□□ -1.55
PEX4YGR133W ALG14P38242 237 aa5.37□□□□□ -1.55
PEX4YGR133W GUA1P38625 525 aaKnown RBP5.37□□□□□ -1.55
PEX4YGR133W ATG3P40344 310 aa5.37□□□□□ -1.55
PEX4YGR133W NHA1Q99271 985 aa5.37□□□□□ -1.55
PEX4YGR133W TFB3Q03290 321 aa5.36□□□□□ -1.55
PEX4YGR133W YTA6P40328 754 aa5.33□□□□□ -1.56
PEX4YGR133W AVT1P47082 602 aa5.33□□□□□ -1.56
PEX4YGR133W GAS5Q08193 484 aa5.33□□□□□ -1.56
PEX4YGR133W RPP1AP05318 106 aaPredicted RBP5.32□□□□□ -1.56
PEX4YGR133W MLF3P32047 452 aa5.32□□□□□ -1.56
PEX4YGR133W AIM9P40053 627 aaKnown RBP5.32□□□□□ -1.56
PEX4YGR133W NAR1P23503 491 aaKnown RBP5.31□□□□□ -1.56
PEX4YGR133W PRK1P40494 810 aa5.31□□□□□ -1.56
PEX4YGR133W YPP1P46951 817 aa5.31□□□□□ -1.56
PEX4YGR133W AI3P03877 415 aa5.3□□□□□ -1.56
PEX4YGR133W RPS6AP0CX37 236 aaKnown RBP5.3□□□□□ -1.56
PEX4YGR133W RPS6BP0CX38 236 aaPredicted RBP5.3□□□□□ -1.56
PEX4YGR133W BIO2P32451 375 aa5.3□□□□□ -1.56
PEX4YGR133W PGM1P33401 570 aaKnown RBP5.29□□□□□ -1.56
PEX4YGR133W Q0182Q9ZZW1 134 aa5.29□□□□□ -1.56
PEX4YGR133W ENO2P00925 437 aaKnown RBP5.28□□□□□ -1.56
PEX4YGR133W HEH2Q03281 663 aa5.28□□□□□ -1.56
PEX4YGR133W GIS4Q04233 774 aa5.28□□□□□ -1.56
PEX4YGR133W MCM1P11746 286 aa5.27□□□□□ -1.57
PEX4YGR133W SAC7P17121 654 aa5.27□□□□□ -1.57
PEX4YGR133W RRM3P38766 723 aa5.27□□□□□ -1.57
PEX4YGR133W YNL108CP53929 270 aa5.27□□□□□ -1.57
PEX4YGR133W TRP3P00937 484 aa5.26□□□□□ -1.57
PEX4YGR133W SUP45P12385 437 aaKnown RBP5.26□□□□□ -1.57
PEX4YGR133W PKC1P24583 1151 aa5.26□□□□□ -1.57
PEX4YGR133W NTH2P35172 780 aa5.26□□□□□ -1.57
PEX4YGR133W YKR073CP36153 106 aa5.26□□□□□ -1.57
PEX4YGR133W MTO1P53070 669 aa5.26□□□□□ -1.57
PEX4YGR133W RDS2P19541 446 aaKnown RBP5.25□□□□□ -1.57
PEX4YGR133W BRL1P38770 471 aa5.24□□□□□ -1.57
PEX4YGR133W ARI1P53111 347 aaKnown RBP5.24□□□□□ -1.57
PEX4YGR133W COQ2P32378 372 aa5.23□□□□□ -1.57
PEX4YGR133W MED7Q08278 222 aa5.23□□□□□ -1.57
PEX4YGR133W LIP5P32875 414 aa5.22□□□□□ -1.57
PEX4YGR133W NCL1P38205 684 aaKnown RBP5.22□□□□□ -1.57
PEX4YGR133W YFL034WP43564 1073 aa5.22□□□□□ -1.57
PEX4YGR133W RIM21P48565 533 aa5.22□□□□□ -1.57
PEX4YGR133W PDI1P17967 522 aaKnown RBP5.21□□□□□ -1.58
PEX4YGR133W NAB2P32505 525 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
PEX4YGR133W KAE1P36132 386 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms