RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	SPT5	P27692	1063 aa	Known RBP	5.93	□□□□□ -1.46
RVB1	YDR190C	TTI1	P36097	1038 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	TIF11	P38912	153 aa	Known RBP	5.93	□□□□□ -1.46
RVB1	YDR190C	SAP155	P43612	1002 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	YML020W	Q03722	664 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	YPR204W	Q08995	1032 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	RSC30	P38781	883 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	FPR3	P38911	411 aa	Known RBP	5.93	□□□□□ -1.46
RVB1	YDR190C	RTF1	P53064	558 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	PAP2	P53632	584 aa	Known RBP	5.93	□□□□□ -1.46
RVB1	YDR190C	YNL115C	P53925	644 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	LAM6	Q08001	693 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	ISU2	Q12056	156 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	YRR1	Q12172	810 aa		5.93	□□□□□ -1.46
RVB1	YDR190C	KAR2	P16474	682 aa	Known RBP	5.92	□□□□□ -1.46
RVB1	YDR190C	SLY41	P22215	453 aa		5.92	□□□□□ -1.46
RVB1	YDR190C	TPD3	P31383	635 aa		5.92	□□□□□ -1.46
RVB1	YDR190C	YNL035C	P53962	389 aa	Known RBP	5.92	□□□□□ -1.46
RVB1	YDR190C	NOP8	Q08287	484 aa	Predicted RBP	5.92	□□□□□ -1.46
RVB1	YDR190C	MPC54	Q08550	464 aa		5.92	□□□□□ -1.46
RVB1	YDR190C	SNF2	P22082	1703 aa		5.91	□□□□□ -1.46
RVB1	YDR190C	CPS1	P27614	576 aa		5.91	□□□□□ -1.46
RVB1	YDR190C	MID1	P41821	548 aa		5.91	□□□□□ -1.46
RVB1	YDR190C	PML39	Q03760	334 aa		5.91	□□□□□ -1.46
RVB1	YDR190C	IOC4	Q04213	475 aa		5.91	□□□□□ -1.46
RVB1	YDR190C	IOC2	Q12072	812 aa		5.91	□□□□□ -1.46
RVB1	YDR190C	LEU2	P04173	364 aa	Predicted RBP	5.9	□□□□□ -1.47
RVB1	YDR190C	MAK16	P10962	306 aa	Predicted RBP	5.9	□□□□□ -1.47
RVB1	YDR190C	SIS2	P36024	562 aa		5.9	□□□□□ -1.47
RVB1	YDR190C	MAK10	Q02197	733 aa		5.9	□□□□□ -1.47
RVB1	YDR190C	SPP1	Q03012	353 aa		5.9	□□□□□ -1.47
RVB1	YDR190C	THI22	Q06490	572 aa		5.9	□□□□□ -1.47
RVB1	YDR190C	AIM44	Q99299	758 aa		5.9	□□□□□ -1.47
RVB1	YDR190C	PSK1	P31374	1356 aa		5.89	□□□□□ -1.47
RVB1	YDR190C	DAL5	P15365	543 aa		5.89	□□□□□ -1.47
RVB1	YDR190C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
RVB1	YDR190C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
RVB1	YDR190C	PRD1	P25375	712 aa		5.88	□□□□□ -1.47
RVB1	YDR190C	YDJ1	P25491	409 aa	Known RBP	5.88	□□□□□ -1.47
RVB1	YDR190C	YNR029C	P53729	429 aa	Known RBP	5.88	□□□□□ -1.47
RVB1	YDR190C	GAS4	Q08271	471 aa		5.88	□□□□□ -1.47
RVB1	YDR190C	DNF3	Q12674	1656 aa		5.87	□□□□□ -1.47
RVB1	YDR190C	ENO2	P00925	437 aa	Known RBP	5.87	□□□□□ -1.47
RVB1	YDR190C	RPS24A	P0CX31	135 aa	Known RBP	5.87	□□□□□ -1.47
RVB1	YDR190C	RPS24B	P0CX32	135 aa	Known RBP	5.87	□□□□□ -1.47
RVB1	YDR190C	PDI1	P17967	522 aa	Known RBP	5.87	□□□□□ -1.47
RVB1	YDR190C	YFR016C	P43597	1233 aa	Known RBP	5.87	□□□□□ -1.47
RVB1	YDR190C	YRB30	P53107	440 aa	Predicted RBP	5.87	□□□□□ -1.47
RVB1	YDR190C	PUS6	P53294	404 aa		5.87	□□□□□ -1.47
RVB1	YDR190C	NMA111	P53920	997 aa		5.87	□□□□□ -1.47
RVB1	YDR190C	RPL34A	P87262	121 aa	Predicted RBP	5.87	□□□□□ -1.47
RVB1	YDR190C	PEX29	Q03370	554 aa		5.87	□□□□□ -1.47
RVB1	YDR190C	TAP42	Q04372	366 aa		5.87	□□□□□ -1.47
RVB1	YDR190C	NOB1	Q08444	459 aa	Known RBP	5.87	□□□□□ -1.47
RVB1	YDR190C	AUS1	Q08409	1394 aa		5.86	□□□□□ -1.47
RVB1	YDR190C	ENO1	P00924	437 aa	Known RBP	5.86	□□□□□ -1.47
RVB1	YDR190C	RAD2	P07276	1031 aa		5.86	□□□□□ -1.47
RVB1	YDR190C	SEC61	P32915	480 aa		5.86	□□□□□ -1.47
RVB1	YDR190C	NAF1	P53919	492 aa	Known RBP	5.86	□□□□□ -1.47
RVB1	YDR190C	MRX10	Q05648	414 aa		5.86	□□□□□ -1.47
RVB1	YDR190C	RTT109	Q07794	436 aa		5.86	□□□□□ -1.47
RVB1	YDR190C	TRM1	P15565	570 aa	Known RBP	5.85	□□□□□ -1.47
RVB1	YDR190C	NUD1	P32336	851 aa		5.85	□□□□□ -1.47
RVB1	YDR190C	YIL092W	P40497	633 aa		5.85	□□□□□ -1.47
RVB1	YDR190C	YPP1	P46951	817 aa		5.85	□□□□□ -1.47
RVB1	YDR190C	MTR4	P47047	1073 aa	Known RBP	5.85	□□□□□ -1.47
RVB1	YDR190C	RIM21	P48565	533 aa		5.85	□□□□□ -1.47
RVB1	YDR190C	HEF3	P53978	1044 aa	Known RBP	5.85	□□□□□ -1.47
RVB1	YDR190C	HAP1	P0CE41	1502 aa		5.85	□□□□□ -1.47
RVB1	YDR190C	RTG1	P32607	177 aa		5.84	□□□□□ -1.47
RVB1	YDR190C	OPY1	P38271	328 aa		5.84	□□□□□ -1.47
RVB1	YDR190C	USO1	P25386	1790 aa		5.84	□□□□□ -1.47
RVB1	YDR190C	KEX2	P13134	814 aa		5.83	□□□□□ -1.48
RVB1	YDR190C	CDC3	P32457	520 aa	Known RBP	5.83	□□□□□ -1.48
RVB1	YDR190C	IME2	P32581	645 aa		5.83	□□□□□ -1.48
RVB1	YDR190C	POL32	P47110	350 aa		5.83	□□□□□ -1.48
RVB1	YDR190C	DPS1	P04802	557 aa	Known RBP	5.82	□□□□□ -1.48
RVB1	YDR190C	PUP1	P25043	261 aa		5.82	□□□□□ -1.48
RVB1	YDR190C	GRX4	P32642	244 aa		5.82	□□□□□ -1.48
RVB1	YDR190C	NPL4	P33755	580 aa		5.82	□□□□□ -1.48
RVB1	YDR190C	TFG1	P41895	735 aa	Predicted RBP	5.82	□□□□□ -1.48
RVB1	YDR190C	SLD2	P34252	453 aa		5.81	□□□□□ -1.48
RVB1	YDR190C	TBF1	Q02457	562 aa		5.81	□□□□□ -1.48
RVB1	YDR190C	PUF6	Q04373	656 aa	Known RBP	5.81	□□□□□ -1.48
RVB1	YDR190C	ERF2	Q06551	359 aa		5.81	□□□□□ -1.48
RVB1	YDR190C	LDB19	Q12502	818 aa		5.81	□□□□□ -1.48
RVB1	YDR190C	YDL129W	Q07555	291 aa		5.8	□□□□□ -1.48
RVB1	YDR190C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.8	□□□□□ -1.48
RVB1	YDR190C	PEP12	P32854	288 aa		5.8	□□□□□ -1.48
RVB1	YDR190C	TGL4	P36165	910 aa		5.8	□□□□□ -1.48
RVB1	YDR190C	AKL1	P38080	1108 aa	Known RBP	5.8	□□□□□ -1.48
RVB1	YDR190C	YBR287W	P38355	427 aa		5.8	□□□□□ -1.48
RVB1	YDR190C	DSD1	P53095	428 aa		5.8	□□□□□ -1.48
RVB1	YDR190C	PRP43	P53131	767 aa	Known RBP	5.8	□□□□□ -1.48
RVB1	YDR190C	NCR1	Q12200	1170 aa		5.8	□□□□□ -1.48
RVB1	YDR190C	RRT14	P40470	206 aa		5.79	□□□□□ -1.48
RVB1	YDR190C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
RVB1	YDR190C	YML083C	Q04526	418 aa		5.79	□□□□□ -1.48
RVB1	YDR190C	MCM16	Q12262	181 aa		5.79	□□□□□ -1.48
RVB1	YDR190C	PDR1	P12383	1068 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms