RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C THI72Q08579 599 aa6.41□□□□□ -1.38
SHU2YDR078C PEP12P32854 288 aa6.4□□□□□ -1.38
SHU2YDR078C TGL4P36165 910 aa6.4□□□□□ -1.38
SHU2YDR078C VTC4P47075 721 aa6.4□□□□□ -1.38
SHU2YDR078C CUZ1P53899 274 aa6.4□□□□□ -1.38
SHU2YDR078C TEC1P18412 486 aa6.39□□□□□ -1.39
SHU2YDR078C RDS2P19541 446 aaKnown RBP6.39□□□□□ -1.39
SHU2YDR078C AI1P03875 834 aa6.38□□□□□ -1.39
SHU2YDR078C CCT8P47079 568 aaKnown RBP6.38□□□□□ -1.39
SHU2YDR078C NRD1P53617 575 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
SHU2YDR078C SSF1P38789 453 aaPredicted RBP6.35□□□□□ -1.39
SHU2YDR078C EMP47P43555 445 aa6.35□□□□□ -1.39
SHU2YDR078C DAL1P32375 460 aa6.34□□□□□ -1.39
SHU2YDR078C ISF1P32488 338 aa6.34□□□□□ -1.39
SHU2YDR078C SLD2P34252 453 aa6.34□□□□□ -1.39
SHU2YDR078C CEM1P39525 442 aa6.34□□□□□ -1.39
SHU2YDR078C MRX12P47084 519 aa6.33□□□□□ -1.4
SHU2YDR078C FRA1Q07825 749 aa6.33□□□□□ -1.4
SHU2YDR078C GUT2P32191 649 aa6.32□□□□□ -1.4
SHU2YDR078C KTR7P40504 517 aa6.32□□□□□ -1.4
SHU2YDR078C ECM23Q02710 187 aa6.32□□□□□ -1.4
SHU2YDR078C ISU1Q03020 165 aa6.32□□□□□ -1.4
SHU2YDR078C GAL2P13181 574 aa6.31□□□□□ -1.4
SHU2YDR078C ATG3P40344 310 aa6.31□□□□□ -1.4
SHU2YDR078C STE20Q03497 939 aaKnown RBP6.31□□□□□ -1.4
SHU2YDR078C YPR053CQ6Q5F3 151 aa6.31□□□□□ -1.4
SHU2YDR078C ATG20Q07528 640 aa6.3□□□□□ -1.4
SHU2YDR078C HAT1Q12341 374 aa6.3□□□□□ -1.4
SHU2YDR078C UTP13Q05946 817 aaKnown RBP6.29□□□□□ -1.4
SHU2YDR078C SYT1Q06836 1226 aa6.29□□□□□ -1.4
SHU2YDR078C UBX7P38349 436 aa6.28□□□□□ -1.4
SHU2YDR078C SBE2P42223 864 aaKnown RBP6.28□□□□□ -1.4
SHU2YDR078C APL6P46682 809 aa6.28□□□□□ -1.4
SHU2YDR078C YMR265CQ03508 461 aaKnown RBP6.28□□□□□ -1.4
SHU2YDR078C DLD3P39976 496 aaKnown RBP6.27□□□□□ -1.41
SHU2YDR078C SEN54Q02825 467 aaPredicted RBP6.27□□□□□ -1.41
SHU2YDR078C DIT1P21623 536 aa6.26□□□□□ -1.41
SHU2YDR078C PHO87P25360 923 aa6.26□□□□□ -1.41
SHU2YDR078C UBP15P50101 1230 aa6.26□□□□□ -1.41
SHU2YDR078C ADE12P80210 433 aaKnown RBP6.26□□□□□ -1.41
SHU2YDR078C TDA6Q06466 467 aa6.26□□□□□ -1.41
SHU2YDR078C SLA1P32790 1244 aa6.25□□□□□ -1.41
SHU2YDR078C SOH1P38633 127 aa6.25□□□□□ -1.41
SHU2YDR078C SKN7P38889 622 aa6.25□□□□□ -1.41
SHU2YDR078C HAP4P14064 554 aa6.24□□□□□ -1.41
SHU2YDR078C SSN3P39073 555 aa6.24□□□□□ -1.41
SHU2YDR078C KRE33P53914 1056 aaKnown RBP6.24□□□□□ -1.41
SHU2YDR078C TY1A-DR3Q12441 440 aa6.24□□□□□ -1.41
SHU2YDR078C PUF6Q04373 656 aaKnown RBP6.23□□□□□ -1.41
SHU2YDR078C YDR461C-AQ2V2P7 80 aa6.23□□□□□ -1.41
SHU2YDR078C SBP1P10080 294 aaKnown RBP6.22□□□□□ -1.41
SHU2YDR078C HEM3P28789 327 aa6.22□□□□□ -1.41
SHU2YDR078C TPS3P38426 1054 aaKnown RBP6.22□□□□□ -1.41
SHU2YDR078C STM1P39015 273 aaKnown RBP6.22□□□□□ -1.41
SHU2YDR078C ACS2P52910 683 aaKnown RBP6.22□□□□□ -1.41
SHU2YDR078C MSN5P52918 1224 aa6.22□□□□□ -1.41
SHU2YDR078C YMR187CQ03236 431 aa6.22□□□□□ -1.41
SHU2YDR078C CWC15Q03772 175 aaKnown RBP6.22□□□□□ -1.41
SHU2YDR078C WTM2Q12206 467 aa6.22□□□□□ -1.41
SHU2YDR078C RPP2BP02400 110 aaKnown RBP6.21□□□□□ -1.42
SHU2YDR078C ROM1P53046 1155 aa6.21□□□□□ -1.42
SHU2YDR078C GAS4Q08271 471 aa6.21□□□□□ -1.42
SHU2YDR078C YBL113CQ7M4S9 792 aa6.21□□□□□ -1.42
SHU2YDR078C ERP5P38819 212 aa6.2□□□□□ -1.42
SHU2YDR078C TSC13Q99190 310 aa6.2□□□□□ -1.42
SHU2YDR078C SNU71P53207 620 aaKnown RBP6.19□□□□□ -1.42
SHU2YDR078C KAR5Q04746 504 aa6.19□□□□□ -1.42
SHU2YDR078C PDI1P17967 522 aaKnown RBP6.18□□□□□ -1.42
SHU2YDR078C HAL5P38970 855 aaKnown RBP6.18□□□□□ -1.42
SHU2YDR078C SEC20P28791 383 aa6.17□□□□□ -1.42
SHU2YDR078C IPL1P38991 367 aa6.17□□□□□ -1.42
SHU2YDR078C YFL034WP43564 1073 aa6.17□□□□□ -1.42
SHU2YDR078C ISR1Q06098 443 aaKnown RBP6.17□□□□□ -1.42
SHU2YDR078C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42 RIP-Chip
SHU2YDR078C TRL1P09880 827 aaKnown RBP6.16□□□□□ -1.42
SHU2YDR078C SRS2P12954 1174 aa6.16□□□□□ -1.42
SHU2YDR078C NOP7P53261 605 aaKnown RBP6.16□□□□□ -1.42
SHU2YDR078C YNR014WP53719 212 aa6.16□□□□□ -1.42
SHU2YDR078C PNP1Q05788 311 aa6.16□□□□□ -1.42
SHU2YDR078C SPT2P06843 333 aaPredicted RBP6.15□□□□□ -1.42
SHU2YDR078C DAT1P13483 248 aaKnown RBP6.15□□□□□ -1.42
SHU2YDR078C YCK2P23292 546 aaKnown RBP6.15□□□□□ -1.42
SHU2YDR078C VAN1P23642 535 aa6.15□□□□□ -1.42
SHU2YDR078C AHP1P38013 176 aaKnown RBP6.15□□□□□ -1.42
SHU2YDR078C MCX1P38323 520 aaPredicted RBP6.15□□□□□ -1.42
SHU2YDR078C AIM9P40053 627 aaKnown RBP6.15□□□□□ -1.42
SHU2YDR078C PUN1Q06991 263 aa6.15□□□□□ -1.42
SHU2YDR078C MSC6Q08818 692 aaKnown RBP6.15□□□□□ -1.42
SHU2YDR078C GPM1P00950 247 aaKnown RBP6.14□□□□□ -1.43
SHU2YDR078C ASF1P32447 279 aa6.14□□□□□ -1.43
SHU2YDR078C UTR2P32623 467 aa6.14□□□□□ -1.43
SHU2YDR078C RRN6P32786 894 aa6.14□□□□□ -1.43
SHU2YDR078C BOL3P39724 118 aa6.14□□□□□ -1.43
SHU2YDR078C ATG1P53104 897 aa6.14□□□□□ -1.43
SHU2YDR078C HDA3Q06623 655 aa6.14□□□□□ -1.43
SHU2YDR078C GLT1Q12680 2145 aaKnown RBP6.14□□□□□ -1.43
SHU2YDR078C GRS1P38088 690 aaKnown RBP6.13□□□□□ -1.43
SHU2YDR078C UTP7P40055 554 aaKnown RBP6.13□□□□□ -1.43
SHU2YDR078C MDJ2P42834 146 aa6.13□□□□□ -1.43
SHU2YDR078C TRS33Q99394 268 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms