RNA–Protein interactions for RNA: YDL149W

ATG9, Transcript of Transmembrane protein involved in forming Cvt and autophagic vesicles, yeastyeast

Gene ATG9, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG9YDL149W RAD4P14736 754 aa2.32□□□□□ -2.04
ATG9YDL149W PSE1P32337 1089 aaKnown RBP2.32□□□□□ -2.04
ATG9YDL149W NST1P53935 1240 aa2.32□□□□□ -2.04
ATG9YDL149W ERO1Q03103 563 aa2.32□□□□□ -2.04
ATG9YDL149W SUP45P12385 437 aaKnown RBP2.32□□□□□ -2.04
ATG9YDL149W CDC60P26637 1090 aaKnown RBP2.32□□□□□ -2.04
ATG9YDL149W ABZ1P37254 787 aaPredicted RBP2.32□□□□□ -2.04
ATG9YDL149W VPS16Q03308 798 aa2.32□□□□□ -2.04
ATG9YDL149W SPC19Q03954 165 aa2.32□□□□□ -2.04
ATG9YDL149W SPR28Q04921 423 aa2.32□□□□□ -2.04
ATG9YDL149W YLR125WQ12138 136 aa2.32□□□□□ -2.04
ATG9YDL149W SPT7P35177 1332 aa2.32□□□□□ -2.04
ATG9YDL149W MRC1P25588 1096 aa2.31□□□□□ -2.04
ATG9YDL149W TIM23P32897 222 aa2.31□□□□□ -2.04
ATG9YDL149W DOT6P40059 670 aaKnown RBP2.31□□□□□ -2.04
ATG9YDL149W YPP1P46951 817 aa2.31□□□□□ -2.04
ATG9YDL149W HLJ1P48353 224 aa2.31□□□□□ -2.04
ATG9YDL149W PHM6Q05637 104 aa2.31□□□□□ -2.04
ATG9YDL149W PUN1Q06991 263 aa2.31□□□□□ -2.04
ATG9YDL149W NUP145P49687 1317 aa2.31□□□□□ -2.04
ATG9YDL149W FOB1O13329 566 aa2.31□□□□□ -2.04
ATG9YDL149W GAL2P13181 574 aa2.31□□□□□ -2.04
ATG9YDL149W PRI2P20457 528 aa2.31□□□□□ -2.04
ATG9YDL149W SIT4P20604 311 aa2.31□□□□□ -2.04
ATG9YDL149W RPT1P33299 467 aaKnown RBP2.31□□□□□ -2.04
ATG9YDL149W SAS3P34218 831 aa2.31□□□□□ -2.04
ATG9YDL149W HAL5P38970 855 aaKnown RBP2.31□□□□□ -2.04
ATG9YDL149W EMP47P43555 445 aa2.31□□□□□ -2.04
ATG9YDL149W YJR107WP47145 328 aa2.31□□□□□ -2.04
ATG9YDL149W ATG1P53104 897 aa2.31□□□□□ -2.04
ATG9YDL149W SXM1Q04175 944 aaKnown RBP2.31□□□□□ -2.04
ATG9YDL149W PNP1Q05788 311 aa2.31□□□□□ -2.04
ATG9YDL149W NUT2Q06213 157 aa2.31□□□□□ -2.04
ATG9YDL149W BDF2Q07442 638 aa2.31□□□□□ -2.04
ATG9YDL149W GRC3Q07845 632 aa2.31□□□□□ -2.04
ATG9YDL149W AIR2Q12476 344 aaKnown RBP2.31□□□□□ -2.04
ATG9YDL149W MSM1P22438 575 aa2.31□□□□□ -2.04
ATG9YDL149W SCJ1P25303 377 aa2.31□□□□□ -2.04
ATG9YDL149W SPT5P27692 1063 aaKnown RBP2.31□□□□□ -2.04
ATG9YDL149W HIR1P32479 840 aa2.31□□□□□ -2.04
ATG9YDL149W RAD54P32863 898 aa2.31□□□□□ -2.04
ATG9YDL149W PET112P33893 541 aa2.31□□□□□ -2.04
ATG9YDL149W VPS29P38759 282 aa2.31□□□□□ -2.04
ATG9YDL149W SRP1Q02821 542 aaKnown RBP2.31□□□□□ -2.04
ATG9YDL149W TDA5Q06417 326 aaKnown RBP2.31□□□□□ -2.04
ATG9YDL149W PIN2Q12057 282 aa2.31□□□□□ -2.04
ATG9YDL149W REC8Q12188 680 aa2.31□□□□□ -2.04
ATG9YDL149W MIP1P15801 1254 aa2.3□□□□□ -2.04
ATG9YDL149W QDR1P40475 563 aa2.3□□□□□ -2.04
ATG9YDL149W MTR4P47047 1073 aaKnown RBP2.3□□□□□ -2.04
ATG9YDL149W YGR021WP53212 290 aa2.3□□□□□ -2.04
ATG9YDL149W SND1Q04007 877 aa2.3□□□□□ -2.04
ATG9YDL149W MRX10Q05648 414 aa2.3□□□□□ -2.04
ATG9YDL149W ESF1Q06344 628 aaKnown RBP2.3□□□□□ -2.04
ATG9YDL149W HSP42Q12329 375 aa2.3□□□□□ -2.04
ATG9YDL149W HSC82P15108 705 aaKnown RBP2.3□□□□□ -2.04
ATG9YDL149W GRX1P25373 110 aaKnown RBP2.3□□□□□ -2.04
ATG9YDL149W YJU3P28321 313 aa2.3□□□□□ -2.04
ATG9YDL149W BRF1P29056 596 aa2.3□□□□□ -2.04
ATG9YDL149W SSH4P32343 579 aa2.3□□□□□ -2.04
ATG9YDL149W YKL222CP35995 705 aa2.3□□□□□ -2.04
ATG9YDL149W EDS1P38073 919 aa2.3□□□□□ -2.04
ATG9YDL149W NMD3P38861 518 aaKnown RBP2.3□□□□□ -2.04
ATG9YDL149W RIM21P48565 533 aa2.3□□□□□ -2.04
ATG9YDL149W ATP22P50273 684 aaPredicted RBP2.3□□□□□ -2.04
ATG9YDL149W RTF1P53064 558 aa2.3□□□□□ -2.04
ATG9YDL149W PEX8P53248 589 aa2.3□□□□□ -2.04
ATG9YDL149W ALO1P54783 526 aaKnown RBP2.3□□□□□ -2.04
ATG9YDL149W YDR341CQ05506 607 aaKnown RBP2.3□□□□□ -2.04
ATG9YDL149W YLR352WQ06479 807 aa2.3□□□□□ -2.04
ATG9YDL149W TSR2Q06672 205 aaKnown RBP2.3□□□□□ -2.04
ATG9YDL149W YOR378WQ08902 515 aa2.3□□□□□ -2.04
ATG9YDL149W TMA17Q12513 150 aa2.3□□□□□ -2.04
ATG9YDL149W TY1B-AO13527 1196 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W DPS1P04802 557 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W CYT1P07143 309 aa2.29□□□□□ -2.04
ATG9YDL149W TRL1P09880 827 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W HAP4P14064 554 aa2.29□□□□□ -2.04
ATG9YDL149W NSR1P27476 414 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
ATG9YDL149W PXA2P34230 853 aa2.29□□□□□ -2.04
ATG9YDL149W RPS26AP39938 119 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W RPS26BP39939 119 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W BUD6P41697 788 aa2.29□□□□□ -2.04
ATG9YDL149W YFR006WP43590 535 aa2.29□□□□□ -2.04
ATG9YDL149W MTO1P53070 669 aa2.29□□□□□ -2.04
ATG9YDL149W NAN1Q02931 896 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W ISA1Q07821 250 aaPredicted RBP2.29□□□□□ -2.04
ATG9YDL149W MSH2P25847 964 aa2.29□□□□□ -2.04
ATG9YDL149W NFU1P32860 256 aa2.29□□□□□ -2.04
ATG9YDL149W PEX5P35056 612 aa2.29□□□□□ -2.04
ATG9YDL149W APL2P36000 726 aaPredicted RBP2.29□□□□□ -2.04
ATG9YDL149W BOI1P38041 980 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W TPS3P38426 1054 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W TIF11P38912 153 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W VNX1P42839 908 aa2.29□□□□□ -2.04
ATG9YDL149W FPK1P53739 893 aa2.29□□□□□ -2.04
ATG9YDL149W GDE1Q02979 1223 aa2.29□□□□□ -2.04
ATG9YDL149W HEL2Q05580 639 aaKnown RBP2.29□□□□□ -2.04
ATG9YDL149W OSH2Q12451 1283 aa2.29□□□□□ -2.04
ATG9YDL149W NOP14Q99207 810 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms