RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C SUP45P12385 437 aaKnown RBP5.74□□□□□ -1.49
RRP42YDL111C SSN3P39073 555 aa5.74□□□□□ -1.49
RRP42YDL111C BIO2P32451 375 aa5.73□□□□□ -1.49
RRP42YDL111C UTR2P32623 467 aa5.73□□□□□ -1.49
RRP42YDL111C SLA1P32790 1244 aa5.73□□□□□ -1.49
RRP42YDL111C YPP1P46951 817 aa5.73□□□□□ -1.49
RRP42YDL111C DAT1P13483 248 aaKnown RBP5.72□□□□□ -1.49
RRP42YDL111C DIT1P21623 536 aa5.72□□□□□ -1.49
RRP42YDL111C ADE12P80210 433 aaKnown RBP5.72□□□□□ -1.49
RRP42YDL111C UTP13Q05946 817 aaKnown RBP5.72□□□□□ -1.49
RRP42YDL111C TDA6Q06466 467 aa5.72□□□□□ -1.49
RRP42YDL111C TBS1P38114 1094 aa5.71□□□□□ -1.5
RRP42YDL111C HAL5P38970 855 aaKnown RBP5.71□□□□□ -1.5
RRP42YDL111C SYT1Q06836 1226 aa5.71□□□□□ -1.5
RRP42YDL111C ATG3P40344 310 aa5.7□□□□□ -1.5
RRP42YDL111C KRE33P53914 1056 aaKnown RBP5.7□□□□□ -1.5
RRP42YDL111C YNL108CP53929 270 aa5.7□□□□□ -1.5
RRP42YDL111C TY1A-DR3Q12441 440 aa5.7□□□□□ -1.5
RRP42YDL111C ENO2P00925 437 aaKnown RBP5.69□□□□□ -1.5
RRP42YDL111C AHP1P38013 176 aaKnown RBP5.69□□□□□ -1.5
RRP42YDL111C YNR014WP53719 212 aa5.69□□□□□ -1.5
RRP42YDL111C YMR187CQ03236 431 aa5.69□□□□□ -1.5
RRP42YDL111C YDR461C-AQ2V2P7 80 aa5.69□□□□□ -1.5
RRP42YDL111C SOH1P38633 127 aa5.68□□□□□ -1.5
RRP42YDL111C SLX8P40072 274 aa5.67□□□□□ -1.5
RRP42YDL111C SUM1P46676 1062 aa5.67□□□□□ -1.5
RRP42YDL111C UTP7P40055 554 aaKnown RBP5.66□□□□□ -1.5
RRP42YDL111C YJL007CP47080 104 aa5.66□□□□□ -1.5
RRP42YDL111C HDA3Q06623 655 aa5.66□□□□□ -1.5
RRP42YDL111C SKN7P38889 622 aa5.65□□□□□ -1.5
RRP42YDL111C RIM21P48565 533 aa5.65□□□□□ -1.5
RRP42YDL111C ALA1P40825 983 aaKnown RBP5.64□□□□□ -1.51
RRP42YDL111C JJJ2P46997 583 aa5.64□□□□□ -1.51
RRP42YDL111C RDS2P19541 446 aaKnown RBP5.63□□□□□ -1.51
RRP42YDL111C IRE1P32361 1115 aa5.62□□□□□ -1.51
RRP42YDL111C BIM1P40013 344 aa5.61□□□□□ -1.51
RRP42YDL111C MRX10Q05648 414 aa5.61□□□□□ -1.51
RRP42YDL111C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
RRP42YDL111C SHM1P37292 490 aaPredicted RBP5.6□□□□□ -1.51
RRP42YDL111C BOI2P39969 1040 aa5.59□□□□□ -1.51
RRP42YDL111C ATG32P40458 529 aa5.59□□□□□ -1.51
RRP42YDL111C YPQ2Q06328 317 aa5.59□□□□□ -1.51
RRP42YDL111C GPM1P00950 247 aaKnown RBP5.58□□□□□ -1.52
RRP42YDL111C SWI5P08153 709 aa5.58□□□□□ -1.52
RRP42YDL111C TIF1P10081 395 aaKnown RBP5.58□□□□□ -1.52
RRP42YDL111C FPS1P23900 669 aa5.58□□□□□ -1.52
RRP42YDL111C PSH1Q12161 406 aa5.58□□□□□ -1.52
RRP42YDL111C ENO1P00924 437 aaKnown RBP5.57□□□□□ -1.52
RRP42YDL111C YCK2P23292 546 aaKnown RBP5.57□□□□□ -1.52
RRP42YDL111C PDC6P26263 563 aaKnown RBP5.57□□□□□ -1.52
RRP42YDL111C MCX1P38323 520 aaPredicted RBP5.57□□□□□ -1.52
RRP42YDL111C AIM9P40053 627 aaKnown RBP5.57□□□□□ -1.52
RRP42YDL111C MCA1Q08601 432 aa5.57□□□□□ -1.52
RRP42YDL111C RPS31P05759 152 aaKnown RBP5.56□□□□□ -1.52
RRP42YDL111C MRPL16P38064 232 aa5.56□□□□□ -1.52
RRP42YDL111C SLN1P39928 1220 aaPredicted RBP5.56□□□□□ -1.52
RRP42YDL111C YFL034WP43564 1073 aa5.56□□□□□ -1.52
RRP42YDL111C RTG2P32608 588 aaKnown RBP5.55□□□□□ -1.52
RRP42YDL111C PEP12P32854 288 aa5.55□□□□□ -1.52
RRP42YDL111C YDR215CQ12240 137 aa5.55□□□□□ -1.52
RRP42YDL111C RPS6AP0CX37 236 aaKnown RBP5.54□□□□□ -1.52
RRP42YDL111C RPS6BP0CX38 236 aaPredicted RBP5.54□□□□□ -1.52
RRP42YDL111C STB3Q12427 513 aa5.54□□□□□ -1.52
RRP42YDL111C LEU1P07264 779 aaKnown RBP5.53□□□□□ -1.52
RRP42YDL111C NTH2P35172 780 aa5.53□□□□□ -1.52
RRP42YDL111C AMN1P38285 549 aaPredicted RBP5.53□□□□□ -1.52
RRP42YDL111C RPL34BP40525 121 aaKnown RBP5.53□□□□□ -1.52
RRP42YDL111C SPR3P41901 512 aa5.53□□□□□ -1.52
RRP42YDL111C TSC13Q99190 310 aa5.53□□□□□ -1.52
RRP42YDL111C MCM1P11746 286 aa5.52□□□□□ -1.53
RRP42YDL111C KNS1P32350 737 aaPredicted RBP5.52□□□□□ -1.53
RRP42YDL111C RPP1AP05318 106 aaPredicted RBP5.51□□□□□ -1.53
RRP42YDL111C PDC5P16467 563 aaKnown RBP5.51□□□□□ -1.53
RRP42YDL111C PDI1P17967 522 aaKnown RBP5.51□□□□□ -1.53
RRP42YDL111C MAC1P35192 417 aa5.51□□□□□ -1.53
RRP42YDL111C MET1P36150 593 aa5.51□□□□□ -1.53
RRP42YDL111C TAT1P38085 619 aa5.51□□□□□ -1.53
RRP42YDL111C LSB6P42951 607 aa5.5□□□□□ -1.53
RRP42YDL111C TY1A-DR2Q03964 440 aaKnown RBP5.5□□□□□ -1.53
RRP42YDL111C ALD2P47771 506 aa5.49□□□□□ -1.53
RRP42YDL111C YNL165WP53891 406 aa5.49□□□□□ -1.53
RRP42YDL111C RGP1P16664 663 aa5.48□□□□□ -1.53
RRP42YDL111C YTA6P40328 754 aa5.48□□□□□ -1.53
RRP42YDL111C PRY1P47032 299 aa5.47□□□□□ -1.53
RRP42YDL111C CYT1P07143 309 aa5.46□□□□□ -1.54
RRP42YDL111C PHO87P25360 923 aa5.46□□□□□ -1.54
RRP42YDL111C MSC7P38694 644 aa5.46□□□□□ -1.54
RRP42YDL111C ACS2P52910 683 aaKnown RBP5.46□□□□□ -1.54
RRP42YDL111C SIS2P36024 562 aa5.45□□□□□ -1.54
RRP42YDL111C HAP4P14064 554 aa5.44□□□□□ -1.54
RRP42YDL111C UBP1P25037 809 aa5.44□□□□□ -1.54
RRP42YDL111C MLF3P32047 452 aa5.44□□□□□ -1.54
RRP42YDL111C KTR7P40504 517 aa5.44□□□□□ -1.54
RRP42YDL111C Q0182Q9ZZW1 134 aa5.44□□□□□ -1.54
RRP42YDL111C SSA1P10591 642 aaKnown RBP5.43□□□□□ -1.54
RRP42YDL111C GAS4Q08271 471 aa5.43□□□□□ -1.54
RRP42YDL111C ALO1P54783 526 aaKnown RBP5.42□□□□□ -1.54
RRP42YDL111C HEH2Q03281 663 aa5.42□□□□□ -1.54
RRP42YDL111C GAL2P13181 574 aa5.41□□□□□ -1.54
RRP42YDL111C GEF1P37020 779 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms