RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W GLC3P32775 704 aa7.71□□□□□ -1.18
SIT4YDL047W APL2P36000 726 aaPredicted RBP7.71□□□□□ -1.18
SIT4YDL047W HAA1Q12753 694 aaKnown RBP7.71□□□□□ -1.18
SIT4YDL047W POM152P39685 1337 aa7.71□□□□□ -1.18
SIT4YDL047W RPN1P38764 993 aaKnown RBP7.7□□□□□ -1.18
SIT4YDL047W SAS4Q04003 481 aa7.7□□□□□ -1.18
SIT4YDL047W YIL089WP40500 205 aa7.69□□□□□ -1.18
SIT4YDL047W LYS2P07702 1392 aa7.69□□□□□ -1.18
SIT4YDL047W GAP1P19145 602 aaPredicted RBP7.68□□□□□ -1.18
SIT4YDL047W FET4P40988 552 aa7.68□□□□□ -1.18
SIT4YDL047W ZDS1P50111 915 aaKnown RBP7.68□□□□□ -1.18
SIT4YDL047W MAM1P40065 302 aa7.67□□□□□ -1.18
SIT4YDL047W TIM50Q02776 476 aa7.67□□□□□ -1.18
SIT4YDL047W IOC4Q04213 475 aa7.67□□□□□ -1.18
SIT4YDL047W SDH2P21801 266 aa7.66□□□□□ -1.18
SIT4YDL047W PRD1P25375 712 aa7.66□□□□□ -1.18
SIT4YDL047W PEA2P40091 420 aa7.66□□□□□ -1.18
SIT4YDL047W YGR117CP53270 476 aa7.66□□□□□ -1.18
SIT4YDL047W ZDS2P54786 942 aa7.66□□□□□ -1.18
SIT4YDL047W VPS64Q03944 604 aa7.66□□□□□ -1.18
SIT4YDL047W TYW1Q08960 810 aaKnown RBP7.66□□□□□ -1.18
SIT4YDL047W BMS1Q08965 1183 aaKnown RBP7.66□□□□□ -1.18
SIT4YDL047W RTR1P40084 226 aaPredicted RBP7.65□□□□□ -1.18
SIT4YDL047W HKR1P41809 1802 aa7.65□□□□□ -1.18
SIT4YDL047W YLR271WQ06152 274 aa7.65□□□□□ -1.18
SIT4YDL047W AIM7Q12156 149 aa7.65□□□□□ -1.18
SIT4YDL047W COQ4O13525 335 aa7.64□□□□□ -1.19
SIT4YDL047W EMP47P43555 445 aa7.64□□□□□ -1.19
SIT4YDL047W MAC1P35192 417 aa7.63□□□□□ -1.19
SIT4YDL047W TRM44Q02648 567 aaKnown RBP7.63□□□□□ -1.19
SIT4YDL047W CWC15Q03772 175 aaKnown RBP7.63□□□□□ -1.19
SIT4YDL047W YOL057WQ08225 711 aa7.63□□□□□ -1.19
SIT4YDL047W KRE2P27809 442 aa7.62□□□□□ -1.19
SIT4YDL047W TIF4632P39936 914 aaKnown RBP7.62□□□□□ -1.19
SIT4YDL047W CRF1Q04930 467 aa7.62□□□□□ -1.19
SIT4YDL047W SRF1Q12516 437 aa7.62□□□□□ -1.19
SIT4YDL047W FIG2P25653 1609 aa7.62□□□□□ -1.19
SIT4YDL047W NSR1P27476 414 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
SIT4YDL047W SET4P42948 560 aa7.61□□□□□ -1.19
SIT4YDL047W PSD2P53037 1138 aaKnown RBP7.61□□□□□ -1.19
SIT4YDL047W DNM1P54861 757 aa7.61□□□□□ -1.19
SIT4YDL047W TIF6Q12522 245 aaKnown RBP7.61□□□□□ -1.19
SIT4YDL047W AFG2P32794 780 aa7.6□□□□□ -1.19
SIT4YDL047W ICP55P40051 511 aa7.6□□□□□ -1.19
SIT4YDL047W YJR008WP47085 338 aa7.6□□□□□ -1.19
SIT4YDL047W GYP7P48365 746 aa7.6□□□□□ -1.19
SIT4YDL047W VPS4P52917 437 aa7.6□□□□□ -1.19
SIT4YDL047W PKH1Q03407 766 aa7.6□□□□□ -1.19
SIT4YDL047W UBX2Q04228 584 aa7.6□□□□□ -1.19
SIT4YDL047W GAS5Q08193 484 aa7.6□□□□□ -1.19
SIT4YDL047W RRG1Q12167 365 aaPredicted RBP7.6□□□□□ -1.19
SIT4YDL047W DPH6Q12429 685 aa7.6□□□□□ -1.19
SIT4YDL047W TRP5P00931 707 aaKnown RBP7.59□□□□□ -1.19
SIT4YDL047W YBR287WP38355 427 aa7.59□□□□□ -1.19
SIT4YDL047W THI22Q06490 572 aa7.59□□□□□ -1.19
SIT4YDL047W VPS13Q07878 3144 aa7.59□□□□□ -1.19
SIT4YDL047W HVG1P0CE11 249 aa7.58□□□□□ -1.2
SIT4YDL047W HPR1P17629 752 aaKnown RBP7.58□□□□□ -1.2
SIT4YDL047W YKR023WP36119 530 aaKnown RBP7.58□□□□□ -1.2
SIT4YDL047W BSD2P38356 321 aa7.58□□□□□ -1.2
SIT4YDL047W FCP1Q03254 732 aa7.58□□□□□ -1.2
SIT4YDL047W CST6P40535 587 aa7.57□□□□□ -1.2
SIT4YDL047W RTT109Q07794 436 aa7.57□□□□□ -1.2
SIT4YDL047W SWI1P09547 1314 aa7.56□□□□□ -1.2
SIT4YDL047W STV1P37296 890 aa7.56□□□□□ -1.2
SIT4YDL047W SPL2P38839 148 aa7.56□□□□□ -1.2
SIT4YDL047W YDR306CQ06640 478 aa7.56□□□□□ -1.2
SIT4YDL047W SET1P38827 1080 aaKnown RBP7.55□□□□□ -1.2
SIT4YDL047W NCS6P53088 359 aa7.55□□□□□ -1.2
SIT4YDL047W RRT6P53117 311 aaPredicted RBP7.55□□□□□ -1.2
SIT4YDL047W RPT4P53549 437 aaKnown RBP7.55□□□□□ -1.2
SIT4YDL047W PRP42Q03776 544 aaKnown RBP7.55□□□□□ -1.2
SIT4YDL047W MGM1P32266 881 aa7.54□□□□□ -1.2
SIT4YDL047W PNT1P38969 423 aa7.54□□□□□ -1.2
SIT4YDL047W ITC1P53125 1264 aa7.54□□□□□ -1.2
SIT4YDL047W PIB1Q06651 286 aa7.54□□□□□ -1.2
SIT4YDL047W CSR2Q12734 1121 aa7.54□□□□□ -1.2
SIT4YDL047W SAC3P46674 1301 aa7.53□□□□□ -1.2
SIT4YDL047W GSC2P40989 1895 aa7.53□□□□□ -1.2
SIT4YDL047W PCS60P38137 543 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
SIT4YDL047W GSM1P42950 618 aa7.53□□□□□ -1.2
SIT4YDL047W MPP10P47083 593 aaKnown RBP7.53□□□□□ -1.2
SIT4YDL047W SRT1Q03175 343 aa7.53□□□□□ -1.2
SIT4YDL047W CST9Q06032 482 aa7.53□□□□□ -1.2
SIT4YDL047W CBP1P07252 654 aa7.52□□□□□ -1.21
SIT4YDL047W NGR1P32831 672 aaKnown RBP7.52□□□□□ -1.21
SIT4YDL047W MOT2P34909 587 aaKnown RBP7.52□□□□□ -1.21
SIT4YDL047W NUP133P36161 1157 aa7.52□□□□□ -1.21
SIT4YDL047W THI3Q07471 609 aa7.52□□□□□ -1.21
SIT4YDL047W MRP7P12687 371 aa7.51□□□□□ -1.21
SIT4YDL047W HEF3P53978 1044 aaKnown RBP7.51□□□□□ -1.21
SIT4YDL047W SEN54Q02825 467 aaPredicted RBP7.51□□□□□ -1.21
SIT4YDL047W MTC5Q03897 1148 aa7.51□□□□□ -1.21
SIT4YDL047W PSH1Q12161 406 aa7.51□□□□□ -1.21
SIT4YDL047W FLO11P08640 1367 aa7.5□□□□□ -1.21
SIT4YDL047W LCB1P25045 558 aaKnown RBP7.5□□□□□ -1.21
SIT4YDL047W TPD3P31383 635 aa7.5□□□□□ -1.21
SIT4YDL047W APE3P37302 537 aaKnown RBP7.5□□□□□ -1.21
SIT4YDL047W RSC30P38781 883 aa7.5□□□□□ -1.21
SIT4YDL047W UTP7P40055 554 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms