RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C ERP5P38819 212 aa6.81□□□□□ -1.32
PDB1YBR221C RIA1P53893 1110 aa6.81□□□□□ -1.32
PDB1YBR221C ERP4Q12450 207 aa6.81□□□□□ -1.32
PDB1YBR221C YGR161W-CQ3E744 92 aa6.81□□□□□ -1.32
PDB1YBR221C TAF13P11747 167 aa6.8□□□□□ -1.32
PDB1YBR221C DAL5P15365 543 aa6.8□□□□□ -1.32
PDB1YBR221C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
PDB1YBR221C BUD31P25337 157 aaPredicted RBP6.8□□□□□ -1.32
PDB1YBR221C SEC6P32844 805 aa6.8□□□□□ -1.32
PDB1YBR221C VPS24P36095 224 aaKnown RBP6.8□□□□□ -1.32
PDB1YBR221C VAC8P39968 578 aa6.8□□□□□ -1.32
PDB1YBR221C IOC3P43596 787 aa6.8□□□□□ -1.32
PDB1YBR221C MEH1Q02205 184 aa6.8□□□□□ -1.32
PDB1YBR221C SSF2Q12153 453 aaPredicted RBP6.8□□□□□ -1.32
PDB1YBR221C KRE5P22023 1365 aa6.8□□□□□ -1.32
PDB1YBR221C COQ8P27697 501 aa6.79□□□□□ -1.32
PDB1YBR221C UBP14P38237 781 aaKnown RBP6.79□□□□□ -1.32
PDB1YBR221C RPN12P32496 274 aa6.78□□□□□ -1.32
PDB1YBR221C YHL050CP38721 697 aa6.78□□□□□ -1.32
PDB1YBR221C YHR219WP38900 624 aa6.78□□□□□ -1.32
PDB1YBR221C RPN4Q03465 531 aa6.78□□□□□ -1.32
PDB1YBR221C IMH1Q06704 911 aaKnown RBP6.78□□□□□ -1.32
PDB1YBR221C STB3Q12427 513 aa6.78□□□□□ -1.32
PDB1YBR221C YEL077CQ3E7X8 1277 aa6.78□□□□□ -1.32
PDB1YBR221C TRX2P22803 104 aaKnown RBP6.77□□□□□ -1.33
PDB1YBR221C PPX1P38698 397 aa6.77□□□□□ -1.33
PDB1YBR221C YJL049WP47048 450 aa6.77□□□□□ -1.33
PDB1YBR221C YNL108CP53929 270 aa6.77□□□□□ -1.33
PDB1YBR221C VMS1Q04311 632 aaKnown RBP6.77□□□□□ -1.33
PDB1YBR221C THS1P04801 734 aaKnown RBP6.76□□□□□ -1.33
PDB1YBR221C OPI1P21957 404 aa6.76□□□□□ -1.33
PDB1YBR221C CAB3P36076 571 aa6.76□□□□□ -1.33
PDB1YBR221C YKR023WP36119 530 aaKnown RBP6.76□□□□□ -1.33
PDB1YBR221C FUI1P38196 639 aa6.76□□□□□ -1.33
PDB1YBR221C ENP1P38333 483 aaKnown RBP6.76□□□□□ -1.33
PDB1YBR221C MGE1P38523 228 aa6.76□□□□□ -1.33
PDB1YBR221C BBC1P47068 1157 aa6.76□□□□□ -1.33
PDB1YBR221C ALD3P54114 506 aa6.76□□□□□ -1.33
PDB1YBR221C PSK2Q08217 1101 aa6.76□□□□□ -1.33
PDB1YBR221C STI1P15705 589 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
PDB1YBR221C DEF1P35732 738 aaKnown RBP6.75□□□□□ -1.33
PDB1YBR221C TGL4P36165 910 aa6.75□□□□□ -1.33
PDB1YBR221C RTG3P38165 486 aa6.75□□□□□ -1.33
PDB1YBR221C MNN1P39106 762 aa6.75□□□□□ -1.33
PDB1YBR221C UBP12P39538 1254 aa6.75□□□□□ -1.33
PDB1YBR221C UTP14Q04500 899 aaKnown RBP6.75□□□□□ -1.33
PDB1YBR221C NFU1P32860 256 aa6.74□□□□□ -1.33
PDB1YBR221C CSE4P36012 229 aa6.74□□□□□ -1.33
PDB1YBR221C YJR107WP47145 328 aa6.74□□□□□ -1.33
PDB1YBR221C YJR142WP47173 342 aa6.74□□□□□ -1.33
PDB1YBR221C TLG1Q03322 224 aa6.74□□□□□ -1.33
PDB1YBR221C TY4B-PA0A0B7P3V8 1104 aa6.73□□□□□ -1.33
PDB1YBR221C MRM1P25270 412 aa6.73□□□□□ -1.33
PDB1YBR221C KTR1P27810 393 aaKnown RBP6.73□□□□□ -1.33
PDB1YBR221C BUD6P41697 788 aa6.73□□□□□ -1.33
PDB1YBR221C ITC1P53125 1264 aa6.73□□□□□ -1.33
PDB1YBR221C UBP10P53874 792 aaPredicted RBP6.73□□□□□ -1.33
PDB1YBR221C ALD6P54115 500 aaKnown RBP6.73□□□□□ -1.33
PDB1YBR221C WHI5Q12416 295 aa6.73□□□□□ -1.33
PDB1YBR221C YOR131CQ12486 218 aa6.73□□□□□ -1.33
PDB1YBR221C TY4A-HQ6Q5P6 413 aa6.73□□□□□ -1.33
PDB1YBR221C SUP45P12385 437 aaKnown RBP6.72□□□□□ -1.33
PDB1YBR221C PBP2P38151 413 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
PDB1YBR221C MSH4P40965 878 aaPredicted RBP6.72□□□□□ -1.33
PDB1YBR221C SVL3Q03088 825 aaKnown RBP6.72□□□□□ -1.33
PDB1YBR221C ENO1P00924 437 aaKnown RBP6.71□□□□□ -1.34
PDB1YBR221C MET1P36150 593 aa6.71□□□□□ -1.34
PDB1YBR221C YEN1P40028 759 aa6.71□□□□□ -1.34
PDB1YBR221C KAR5Q04746 504 aa6.71□□□□□ -1.34
PDB1YBR221C CDC53Q12018 815 aaKnown RBP6.71□□□□□ -1.34
PDB1YBR221C MET6P05694 767 aaKnown RBP6.7□□□□□ -1.34
PDB1YBR221C TRL1P09880 827 aaKnown RBP6.7□□□□□ -1.34
PDB1YBR221C UBP1P25037 809 aa6.7□□□□□ -1.34
PDB1YBR221C GRS1P38088 690 aaKnown RBP6.7□□□□□ -1.34
PDB1YBR221C MAL31P38156 614 aa6.7□□□□□ -1.34
PDB1YBR221C MDJ2P42834 146 aa6.7□□□□□ -1.34
PDB1YBR221C WRS1Q12109 432 aaKnown RBP6.7□□□□□ -1.34
PDB1YBR221C SNU66Q12420 587 aaPredicted RBP6.7□□□□□ -1.34
PDB1YBR221C DPS1P04802 557 aaKnown RBP6.69□□□□□ -1.34
PDB1YBR221C MRC1P25588 1096 aa6.69□□□□□ -1.34
PDB1YBR221C PSE1P32337 1089 aaKnown RBP6.69□□□□□ -1.34
PDB1YBR221C GLO3P38682 493 aaKnown RBP6.69□□□□□ -1.34
PDB1YBR221C MAD1P40957 749 aa6.69□□□□□ -1.34
PDB1YBR221C ATG1P53104 897 aa6.69□□□□□ -1.34
PDB1YBR221C MRX10Q05648 414 aa6.69□□□□□ -1.34
PDB1YBR221C TFC3P34111 1160 aa6.68□□□□□ -1.34
PDB1YBR221C MAP2P38174 421 aaKnown RBP6.68□□□□□ -1.34
PDB1YBR221C YBL086CP38177 466 aa6.68□□□□□ -1.34
PDB1YBR221C MUM2P38236 366 aa6.68□□□□□ -1.34
PDB1YBR221C NMD3P38861 518 aaKnown RBP6.68□□□□□ -1.34
PDB1YBR221C GTT3P39996 337 aa6.68□□□□□ -1.34
PDB1YBR221C SYH1Q02875 849 aaKnown RBP6.68□□□□□ -1.34
PDB1YBR221C TYW1Q08960 810 aaKnown RBP6.68□□□□□ -1.34
PDB1YBR221C MNL2Q12205 849 aa6.68□□□□□ -1.34
PDB1YBR221C UGA2P38067 497 aa6.67□□□□□ -1.34
PDB1YBR221C FAF1P40546 346 aaPredicted RBP6.67□□□□□ -1.34
PDB1YBR221C DAK2P43550 591 aa6.67□□□□□ -1.34
PDB1YBR221C MDM1Q01846 1127 aa6.67□□□□□ -1.34
PDB1YBR221C ATG16Q03818 150 aa6.67□□□□□ -1.34
PDB1YBR221C MTC5Q03897 1148 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms