RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ERICH6BQ5W0A0 696 aa23.09■■□□□ 1.29
PHGDH-211ENST00000641213 ADGRB3O60242 1522 aa23.06■■□□□ 1.28
PHGDH-211ENST00000641213 SYNMO15061 1565 aa23.05■■□□□ 1.28
PHGDH-211ENST00000641213 MYOM1P52179 1685 aa23.05■■□□□ 1.28
PHGDH-211ENST00000641213 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
PHGDH-211ENST00000641213 CC2D1BQ5T0F9 858 aaKnown RBP23.04■■□□□ 1.28
PHGDH-211ENST00000641213 NPATQ14207 1427 aa23.04■■□□□ 1.28
PHGDH-211ENST00000641213 NUDCQ9Y266 331 aa23.04■■□□□ 1.28
PHGDH-211ENST00000641213 EIF3AQ14152 1382 aaKnown RBP23.04■■□□□ 1.28
PHGDH-211ENST00000641213 PPLO60437 1756 aa23.04■■□□□ 1.28
PHGDH-211ENST00000641213 NRXN1Q9ULB1 1477 aa23.03■■□□□ 1.28
PHGDH-211ENST00000641213 ADGRF5Q8IZF2 1346 aa23.03■■□□□ 1.28
PHGDH-211ENST00000641213 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
PHGDH-211ENST00000641213 CAMSAP1Q5T5Y3 1602 aa23.03■■□□□ 1.28
PHGDH-211ENST00000641213 ABCC3O15438 1527 aa23.02■■□□□ 1.28
PHGDH-211ENST00000641213 GGT6Q6P531 493 aa23.02■■□□□ 1.28
PHGDH-211ENST00000641213 DIP2CQ9Y2E4 1556 aa23.02■■□□□ 1.27
PHGDH-211ENST00000641213 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
PHGDH-211ENST00000641213 RAPGEF3O95398 923 aa23.01■■□□□ 1.27
PHGDH-211ENST00000641213 CDCA8Q53HL2 280 aa23.01■■□□□ 1.27
PHGDH-211ENST00000641213 SENP3-EIF4A1A0A087X0R7 540 aa23■■□□□ 1.27
PHGDH-211ENST00000641213 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
PHGDH-211ENST00000641213 PPP4R2Q9NY27 417 aa22.98■■□□□ 1.27
PHGDH-211ENST00000641213 MYO3AQ8NEV4 1616 aa22.97■■□□□ 1.27
PHGDH-211ENST00000641213 NOS1P29475 1434 aa22.96■■□□□ 1.27
PHGDH-211ENST00000641213 SETBP1Q9Y6X0 1596 aa22.96■■□□□ 1.27
PHGDH-211ENST00000641213 GLI2P10070 1586 aa22.94■■□□□ 1.26
PHGDH-211ENST00000641213 ZMYM4Q5VZL5 1548 aa22.93■■□□□ 1.26
PHGDH-211ENST00000641213 KNSTRNQ9Y448 316 aa22.93■■□□□ 1.26
PHGDH-211ENST00000641213 RNF123Q5XPI4 1314 aa22.93■■□□□ 1.26
PHGDH-211ENST00000641213 PIK3C2BO00750 1634 aa22.93■■□□□ 1.26
PHGDH-211ENST00000641213 ZC3H13Q5T200 1668 aaKnown RBP22.93■■□□□ 1.26
PHGDH-211ENST00000641213 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
PHGDH-211ENST00000641213 ERVK-7P63135 1459 aa22.92■■□□□ 1.26
PHGDH-211ENST00000641213 INSRP06213 1382 aa22.92■■□□□ 1.26
PHGDH-211ENST00000641213 ASXL1Q8IXJ9 1541 aa22.91■■□□□ 1.26
PHGDH-211ENST00000641213 SLC24A1O60721 1099 aa22.9■■□□□ 1.26
PHGDH-211ENST00000641213 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
PHGDH-211ENST00000641213 PIK3C2GO75747 1445 aa22.9■■□□□ 1.26
PHGDH-211ENST00000641213 BLMP54132 1417 aaPredicted RBP22.89■■□□□ 1.26
PHGDH-211ENST00000641213 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.25
PHGDH-211ENST00000641213 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.25
PHGDH-211ENST00000641213 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.25
PHGDH-211ENST00000641213 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.25
PHGDH-211ENST00000641213 YEATS2Q9ULM3 1422 aa22.87■■□□□ 1.25
PHGDH-211ENST00000641213 RPGRIP1LQ68CZ1 1315 aa22.86■■□□□ 1.25
PHGDH-211ENST00000641213 QRICH2Q9H0J4 1663 aa22.86■■□□□ 1.25
PHGDH-211ENST00000641213 SBNO2Q9Y2G9 1366 aa22.85■■□□□ 1.25
PHGDH-211ENST00000641213 ADGRB1O14514 1584 aa22.85■■□□□ 1.25
PHGDH-211ENST00000641213 NPC1L1Q9UHC9 1359 aa22.85■■□□□ 1.25
PHGDH-211ENST00000641213 PPP2R1AP30153 589 aa22.85■■□□□ 1.25
PHGDH-211ENST00000641213 C14orf93Q9H972 538 aaKnown RBP22.85■■□□□ 1.25
PHGDH-211ENST00000641213 ARHGAP31Q2M1Z3 1444 aa22.84■■□□□ 1.25
PHGDH-211ENST00000641213 PDE3BQ13370 1112 aa22.83■■□□□ 1.24
PHGDH-211ENST00000641213 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.24
PHGDH-211ENST00000641213 B4GALNT3Q6L9W6 998 aa22.82■■□□□ 1.24
PHGDH-211ENST00000641213 MYO5BQ9ULV0 1848 aa22.82■■□□□ 1.24
PHGDH-211ENST00000641213 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
PHGDH-211ENST00000641213 DIP2BQ9P265 1576 aa22.82■■□□□ 1.24
PHGDH-211ENST00000641213 TSPOAP1O95153 1857 aa22.81■■□□□ 1.24
PHGDH-211ENST00000641213 CENPJQ9HC77 1338 aaPredicted RBP22.81■■□□□ 1.24
PHGDH-211ENST00000641213 PREX1Q8TCU6 1659 aa22.8■■□□□ 1.24
PHGDH-211ENST00000641213 RBM19Q9Y4C8 960 aaKnown RBP22.8■■□□□ 1.24
PHGDH-211ENST00000641213 ADAMTS8Q9UP79 889 aa22.77■■□□□ 1.24
PHGDH-211ENST00000641213 TRAK1Q9UPV9 953 aa22.77■■□□□ 1.24
PHGDH-211ENST00000641213 ARHGEF28Q8N1W1 1705 aaKnown RBP22.76■■□□□ 1.23
PHGDH-211ENST00000641213 TMEM132EQ6IEE7 984 aa22.75■■□□□ 1.23
PHGDH-211ENST00000641213 FAM69CQ0P6D2 419 aa22.75■■□□□ 1.23
PHGDH-211ENST00000641213 CARD14Q9BXL6 1004 aa22.75■■□□□ 1.23
PHGDH-211ENST00000641213 VGFO15240 615 aaPredicted RBP22.73■■□□□ 1.23
PHGDH-211ENST00000641213 CDCA7LQ96GN5 454 aa22.73■■□□□ 1.23
PHGDH-211ENST00000641213 IDI1Q13907 227 aa22.73■■□□□ 1.23
PHGDH-211ENST00000641213 RCAN3Q9UKA8 241 aa22.72■■□□□ 1.23
PHGDH-211ENST00000641213 TMEM131LA2VDJ0 1609 aa22.72■■□□□ 1.23
PHGDH-211ENST00000641213 WDR43Q15061 677 aaKnown RBP eCLIP22.72■■□□□ 1.23
PHGDH-211ENST00000641213 NUTM2DQ5VT03 806 aaPredicted RBP22.72■■□□□ 1.23
PHGDH-211ENST00000641213 RRP1P56182 461 aaKnown RBP22.7■■□□□ 1.23
PHGDH-211ENST00000641213 SLC52A1Q9NWF4 448 aa22.7■■□□□ 1.23
PHGDH-211ENST00000641213 ZFYVE9O95405 1425 aa22.69■■□□□ 1.22
PHGDH-211ENST00000641213 REREQ9P2R6 1566 aa22.67■■□□□ 1.22
PHGDH-211ENST00000641213 USP32Q8NFA0 1604 aa22.65■■□□□ 1.22
PHGDH-211ENST00000641213 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
PHGDH-211ENST00000641213 TULP4Q9NRJ4 1543 aa22.63■■□□□ 1.21
PHGDH-211ENST00000641213 PLEKHH1Q9ULM0 1364 aa22.63■■□□□ 1.21
PHGDH-211ENST00000641213 SLC12A5Q9H2X9 1139 aa22.63■■□□□ 1.21
PHGDH-211ENST00000641213 NSD3Q9BZ95 1437 aa22.63■■□□□ 1.21
PHGDH-211ENST00000641213 AGLP35573 1532 aa22.62■■□□□ 1.21
PHGDH-211ENST00000641213 CLTCQ00610 1675 aaKnown RBP22.62■■□□□ 1.21
PHGDH-211ENST00000641213 FBXO31Q5XUX0 539 aaPredicted RBP22.6■■□□□ 1.21
PHGDH-211ENST00000641213 PUS7Q96PZ0 661 aaKnown RBP22.6■■□□□ 1.21
PHGDH-211ENST00000641213 ZNF521Q96K83 1311 aa22.6■■□□□ 1.21
PHGDH-211ENST00000641213 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
PHGDH-211ENST00000641213 EVC2Q86UK5 1308 aa22.59■■□□□ 1.21
PHGDH-211ENST00000641213 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
PHGDH-211ENST00000641213 EXOC6Q8TAG9 804 aa22.57■■□□□ 1.2
PHGDH-211ENST00000641213 POLR3AO14802 1390 aaPredicted RBP22.56■■□□□ 1.2
PHGDH-211ENST00000641213 CCDC146Q8IYE0 955 aa22.55■■□□□ 1.2
PHGDH-211ENST00000641213 PPP6R1Q9UPN7 881 aa22.55■■□□□ 1.2
PHGDH-211ENST00000641213 MORC1Q86VD1 984 aa22.54■■□□□ 1.2
PHGDH-211ENST00000641213 PTPRMP28827 1452 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms