RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 CCDC7Q96M83 1385 aa25.53■■□□□ 1.68
PHGDH-209ENST00000641074 ST20-MTHFSA0A0A6YYL1 179 aa25.52■■□□□ 1.68
PHGDH-209ENST00000641074 SPATA31D1Q6ZQQ2 1576 aa25.52■■□□□ 1.68
PHGDH-209ENST00000641074 PPLO60437 1756 aa25.52■■□□□ 1.68
PHGDH-209ENST00000641074 NRXN1Q9ULB1 1477 aa25.51■■□□□ 1.67
PHGDH-209ENST00000641074 POLR1AO95602 1720 aaPredicted RBP25.5■■□□□ 1.67
PHGDH-209ENST00000641074 KIF7Q2M1P5 1343 aa25.49■■□□□ 1.67
PHGDH-209ENST00000641074 KIAA1210Q9ULL0 1709 aa25.49■■□□□ 1.67
PHGDH-209ENST00000641074 TMEM131LA2VDJ0 1609 aa25.48■■□□□ 1.67
PHGDH-209ENST00000641074 NEXMIFQ5QGS0 1516 aa25.46■■□□□ 1.67
PHGDH-209ENST00000641074 CFAP70Q5T0N1 1121 aa25.46■■□□□ 1.67
PHGDH-209ENST00000641074 MYO5BQ9ULV0 1848 aa25.45■■□□□ 1.66
PHGDH-209ENST00000641074 PIK3C2GO75747 1445 aa25.43■■□□□ 1.66
PHGDH-209ENST00000641074 IQGAP1P46940 1657 aa25.41■■□□□ 1.66
PHGDH-209ENST00000641074 VGFO15240 615 aaPredicted RBP25.41■■□□□ 1.66
PHGDH-209ENST00000641074 NUTM2DQ5VT03 806 aaPredicted RBP25.4■■□□□ 1.66
PHGDH-209ENST00000641074 SCAF11Q99590 1463 aaKnown RBP25.4■■□□□ 1.66
PHGDH-209ENST00000641074 STAG3Q9UJ98 1225 aa25.39■■□□□ 1.65
PHGDH-209ENST00000641074 C14orf93Q9H972 538 aaKnown RBP25.38■■□□□ 1.65
PHGDH-209ENST00000641074 ZFYVE9O95405 1425 aa25.37■■□□□ 1.65
PHGDH-209ENST00000641074 TESK2Q96S53 571 aa25.37■■□□□ 1.65
PHGDH-209ENST00000641074 A2ML1A8K2U0 1454 aa25.36■■□□□ 1.65
PHGDH-209ENST00000641074 TNRQ92752 1358 aa25.36■■□□□ 1.65
PHGDH-209ENST00000641074 FER1L4A9Z1Z3 1794 aa25.34■■□□□ 1.65
PHGDH-209ENST00000641074 POLR3GLQ9BT43 218 aa25.34■■□□□ 1.65
PHGDH-209ENST00000641074 SETBP1Q9Y6X0 1596 aa25.34■■□□□ 1.65
PHGDH-209ENST00000641074 ANP32CO43423 234 aa25.32■■□□□ 1.64
PHGDH-209ENST00000641074 CEBPAP49715 358 aaPredicted RBP25.32■■□□□ 1.64
PHGDH-209ENST00000641074 C3P01024 1663 aa25.3■■□□□ 1.64
PHGDH-209ENST00000641074 ADGRB1O14514 1584 aa25.3■■□□□ 1.64
PHGDH-209ENST00000641074 EIF3AQ14152 1382 aaKnown RBP25.3■■□□□ 1.64
PHGDH-209ENST00000641074 DISP3Q9P2K9 1392 aa25.28■■□□□ 1.64
PHGDH-209ENST00000641074 TMF1P82094 1093 aa25.26■■□□□ 1.63
PHGDH-209ENST00000641074 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
PHGDH-209ENST00000641074 RIMS2Q9UQ26 1411 aa25.26■■□□□ 1.63
PHGDH-209ENST00000641074 KDM5AP29375 1690 aaKnown RBP25.23■■□□□ 1.63
PHGDH-209ENST00000641074 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
PHGDH-209ENST00000641074 NLRP1Q9C000 1473 aa25.22■■□□□ 1.63
PHGDH-209ENST00000641074 UBR1Q8IWV7 1749 aa25.21■■□□□ 1.63
PHGDH-209ENST00000641074 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
PHGDH-209ENST00000641074 TRAK1Q9UPV9 953 aa25.21■■□□□ 1.63
PHGDH-209ENST00000641074 MYO3AQ8NEV4 1616 aa25.2■■□□□ 1.62
PHGDH-209ENST00000641074 ASXL1Q8IXJ9 1541 aa25.18■■□□□ 1.62
PHGDH-209ENST00000641074 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.18■■□□□ 1.62
PHGDH-209ENST00000641074 ALKQ9UM73 1620 aa25.17■■□□□ 1.62
PHGDH-209ENST00000641074 RIMS1Q86UR5 1692 aaKnown RBP25.16■■□□□ 1.62
PHGDH-209ENST00000641074 CCER2I3L3R5 266 aa25.16■■□□□ 1.62
PHGDH-209ENST00000641074 CENPJQ9HC77 1338 aaPredicted RBP25.16■■□□□ 1.62
PHGDH-209ENST00000641074 TMEM2Q9UHN6 1383 aa25.16■■□□□ 1.62
PHGDH-209ENST00000641074 ADAMTSL3P82987 1691 aa25.16■■□□□ 1.62
PHGDH-209ENST00000641074 YTHDC1Q96MU7 727 aaKnown RBP25.15■■□□□ 1.62
PHGDH-209ENST00000641074 SLC24A1O60721 1099 aa25.14■■□□□ 1.62
PHGDH-209ENST00000641074 SBNO2Q9Y2G9 1366 aa25.14■■□□□ 1.61
PHGDH-209ENST00000641074 HDGFP51858 240 aaKnown RBP25.13■■□□□ 1.61
PHGDH-209ENST00000641074 CDCA8Q53HL2 280 aa25.13■■□□□ 1.61
PHGDH-209ENST00000641074 PRKRIP1Q9H875 184 aaPredicted RBP25.12■■□□□ 1.61
PHGDH-209ENST00000641074 ARHGEF28Q8N1W1 1705 aaKnown RBP25.11■■□□□ 1.61
PHGDH-209ENST00000641074 PTPRMP28827 1452 aa25.1■■□□□ 1.61
PHGDH-209ENST00000641074 QRICH2Q9H0J4 1663 aa25.1■■□□□ 1.61
PHGDH-209ENST00000641074 NRXN3Q9Y4C0 1643 aa25.09■■□□□ 1.61
PHGDH-209ENST00000641074 YTHDC2Q9H6S0 1430 aaKnown RBP25.09■■□□□ 1.61
PHGDH-209ENST00000641074 STK26Q9P289 416 aa25.09■■□□□ 1.61
PHGDH-209ENST00000641074 SETD1AO15047 1707 aaKnown RBP25.08■■□□□ 1.6
PHGDH-209ENST00000641074 LTKP29376 864 aa25.04■■□□□ 1.6
PHGDH-209ENST00000641074 PANK3Q9H999 370 aa25.04■■□□□ 1.6
PHGDH-209ENST00000641074 PER1O15534 1290 aaPredicted RBP25.03■■□□□ 1.6
PHGDH-209ENST00000641074 SLIT1O75093 1534 aa25.03■■□□□ 1.6
PHGDH-209ENST00000641074 ARHGAP23Q9P227 1491 aa25.02■■□□□ 1.6
PHGDH-209ENST00000641074 TXNDC2Q86VQ3 553 aa25.02■■□□□ 1.6
PHGDH-209ENST00000641074 THEMISQ8N1K5 641 aaPredicted RBP25.02■■□□□ 1.6
PHGDH-209ENST00000641074 CNGB1Q14028 1251 aaPredicted RBP25■■□□□ 1.59
PHGDH-209ENST00000641074 MYOM1P52179 1685 aa25■■□□□ 1.59
PHGDH-209ENST00000641074 METP08581 1390 aa25■■□□□ 1.59
PHGDH-209ENST00000641074 LRPPRCP42704 1394 aaKnown RBP25■■□□□ 1.59
PHGDH-209ENST00000641074 PLEKHG1Q9ULL1 1385 aa25■■□□□ 1.59
PHGDH-209ENST00000641074 BCANQ96GW7 911 aa25■■□□□ 1.59
PHGDH-209ENST00000641074 EID1Q9Y6B2 187 aa25■■□□□ 1.59
PHGDH-209ENST00000641074 CEP170BQ9Y4F5 1589 aaPredicted RBP24.99■■□□□ 1.59
PHGDH-209ENST00000641074 PRAM1Q96QH2 718 aa24.99■■□□□ 1.59
PHGDH-209ENST00000641074 SAFB2Q14151 953 aaKnown RBP eCLIP24.98■■□□□ 1.59
PHGDH-209ENST00000641074 ADAMTS13Q76LX8 1427 aa24.97■■□□□ 1.59
PHGDH-209ENST00000641074 POGKQ9P215 609 aa24.96■■□□□ 1.59
PHGDH-209ENST00000641074 DLC1Q96QB1 1528 aa24.96■■□□□ 1.59
PHGDH-209ENST00000641074 ABCC11Q96J66 1382 aa24.96■■□□□ 1.59
PHGDH-209ENST00000641074 CENPBP07199 599 aaPredicted RBP24.95■■□□□ 1.59
PHGDH-209ENST00000641074 TULP4Q9NRJ4 1543 aa24.95■■□□□ 1.59
PHGDH-209ENST00000641074 EVC2Q86UK5 1308 aa24.95■■□□□ 1.59
PHGDH-209ENST00000641074 CCDC184Q52MB2 194 aa24.95■■□□□ 1.58
PHGDH-209ENST00000641074 PUS7Q96PZ0 661 aaKnown RBP24.92■■□□□ 1.58
PHGDH-209ENST00000641074 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
PHGDH-209ENST00000641074 ZNF142P52746 1687 aaPredicted RBP24.91■■□□□ 1.58
PHGDH-209ENST00000641074 SETD1BQ9UPS6 1966 aaKnown RBP24.91■■□□□ 1.58
PHGDH-209ENST00000641074 MED14O60244 1454 aa24.9■■□□□ 1.58
PHGDH-209ENST00000641074 MINK1Q8N4C8 1332 aaPredicted RBP24.9■■□□□ 1.58
PHGDH-209ENST00000641074 RALBP1Q15311 655 aa24.9■■□□□ 1.58
PHGDH-209ENST00000641074 WAPLQ7Z5K2 1190 aa24.9■■□□□ 1.58
PHGDH-209ENST00000641074 PLEKHH1Q9ULM0 1364 aa24.88■■□□□ 1.57
PHGDH-209ENST00000641074 SLC26A8Q96RN1 970 aa24.88■■□□□ 1.57
PHGDH-209ENST00000641074 MRS2Q9HD23 443 aa24.88■■□□□ 1.57
PHGDH-209ENST00000641074 KNSTRNQ9Y448 316 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms