RNA–Protein interactions for RNA: ENST00000639370.1

KCNMA1-258, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-258ENST00000639370 BECN1Q14457 450 aa13.18□□□□□ -0.3
KCNMA1-258ENST00000639370 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
KCNMA1-258ENST00000639370 SAMD9LQ8IVG5 1584 aa13.17□□□□□ -0.3
KCNMA1-258ENST00000639370 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
KCNMA1-258ENST00000639370 MAGI2Q86UL8 1455 aa13.17□□□□□ -0.3
KCNMA1-258ENST00000639370 EIF2AK4Q9P2K8 1649 aaKnown RBP13.17□□□□□ -0.3
KCNMA1-258ENST00000639370 EIF3AQ14152 1382 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-258ENST00000639370 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
KCNMA1-258ENST00000639370 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
KCNMA1-258ENST00000639370 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
KCNMA1-258ENST00000639370 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
KCNMA1-258ENST00000639370 CGNL1Q0VF96 1302 aa13.16□□□□□ -0.3
KCNMA1-258ENST00000639370 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
KCNMA1-258ENST00000639370 TNNT2P45379 298 aaPredicted RBP13.15□□□□□ -0.3
KCNMA1-258ENST00000639370 STAC3Q96MF2 364 aa13.15□□□□□ -0.3
KCNMA1-258ENST00000639370 SPAG9O60271 1321 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-258ENST00000639370 NKTRP30414 1462 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-258ENST00000639370 WDR7Q9Y4E6 1490 aa13.14□□□□□ -0.31
KCNMA1-258ENST00000639370 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
KCNMA1-258ENST00000639370 EIF5BO60841 1220 aaKnown RBP13.13□□□□□ -0.31
KCNMA1-258ENST00000639370 IGHDP01880 384 aa13.13□□□□□ -0.31
KCNMA1-258ENST00000639370 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
KCNMA1-258ENST00000639370 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
KCNMA1-258ENST00000639370 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
KCNMA1-258ENST00000639370 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
KCNMA1-258ENST00000639370 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
KCNMA1-258ENST00000639370 SCAF11Q99590 1463 aaKnown RBP13.12□□□□□ -0.31
KCNMA1-258ENST00000639370 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
KCNMA1-258ENST00000639370 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
KCNMA1-258ENST00000639370 DUOX2Q9NRD8 1548 aa13.11□□□□□ -0.31
KCNMA1-258ENST00000639370 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
KCNMA1-258ENST00000639370 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
KCNMA1-258ENST00000639370 PIK3C2GO75747 1445 aa13.11□□□□□ -0.31
KCNMA1-258ENST00000639370 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
KCNMA1-258ENST00000639370 RRP7AQ9Y3A4 280 aaKnown RBP13.11□□□□□ -0.31
KCNMA1-258ENST00000639370 AFAP1Q8N556 730 aa13.1□□□□□ -0.31
KCNMA1-258ENST00000639370 LAMC1P11047 1609 aa13.1□□□□□ -0.31
KCNMA1-258ENST00000639370 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
KCNMA1-258ENST00000639370 KANK1Q14678 1352 aa13.09□□□□□ -0.31
KCNMA1-258ENST00000639370 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
KCNMA1-258ENST00000639370 CDC42BPBQ9Y5S2 1711 aa13.09□□□□□ -0.31
KCNMA1-258ENST00000639370 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
KCNMA1-258ENST00000639370 UNC13BO14795 1591 aa13.09□□□□□ -0.31
KCNMA1-258ENST00000639370 KIF3BO15066 747 aa13.08□□□□□ -0.31
KCNMA1-258ENST00000639370 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.31
KCNMA1-258ENST00000639370 ATP10AO60312 1499 aa13.08□□□□□ -0.32
KCNMA1-258ENST00000639370 BCL2L13Q9BXK5 485 aa13.08□□□□□ -0.32
KCNMA1-258ENST00000639370 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
KCNMA1-258ENST00000639370 IQGAP3Q86VI3 1631 aa13.07□□□□□ -0.32
KCNMA1-258ENST00000639370 ARXQ96QS3 562 aa13.07□□□□□ -0.32
KCNMA1-258ENST00000639370 SEC24BO95487 1268 aa13.06□□□□□ -0.32
KCNMA1-258ENST00000639370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.06□□□□□ -0.32
KCNMA1-258ENST00000639370 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
KCNMA1-258ENST00000639370 CARD14Q9BXL6 1004 aa13.06□□□□□ -0.32
KCNMA1-258ENST00000639370 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
KCNMA1-258ENST00000639370 MAST1Q9Y2H9 1570 aa13.05□□□□□ -0.32
KCNMA1-258ENST00000639370 RUNDC1Q96C34 613 aa13.05□□□□□ -0.32
KCNMA1-258ENST00000639370 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
KCNMA1-258ENST00000639370 TTC37Q6PGP7 1564 aa13.04□□□□□ -0.32
KCNMA1-258ENST00000639370 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
KCNMA1-258ENST00000639370 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-258ENST00000639370 SPRYD3Q8NCJ5 442 aa13.04□□□□□ -0.32
KCNMA1-258ENST00000639370 MYO5CQ9NQX4 1742 aa13.04□□□□□ -0.32
KCNMA1-258ENST00000639370 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-258ENST00000639370 TRAK1Q9UPV9 953 aa13.03□□□□□ -0.32
KCNMA1-258ENST00000639370 PLCH2O75038 1416 aa13.03□□□□□ -0.32
KCNMA1-258ENST00000639370 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
KCNMA1-258ENST00000639370 RARSP54136 660 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-258ENST00000639370 SCAPERQ9BY12 1400 aa13.03□□□□□ -0.32
KCNMA1-258ENST00000639370 POGKQ9P215 609 aa13.03□□□□□ -0.32
KCNMA1-258ENST00000639370 SYNMO15061 1565 aa13.03□□□□□ -0.32
KCNMA1-258ENST00000639370 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.32
KCNMA1-258ENST00000639370 AAMPQ13685 434 aa13.02□□□□□ -0.33
KCNMA1-258ENST00000639370 ADGRF5Q8IZF2 1346 aa13.02□□□□□ -0.33
KCNMA1-258ENST00000639370 PLXNC1O60486 1568 aa13.02□□□□□ -0.33
KCNMA1-258ENST00000639370 L1TD1Q5T7N2 865 aaKnown RBP13.02□□□□□ -0.33
KCNMA1-258ENST00000639370 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
KCNMA1-258ENST00000639370 SLC12A5Q9H2X9 1139 aa13.01□□□□□ -0.33
KCNMA1-258ENST00000639370 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
KCNMA1-258ENST00000639370 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
KCNMA1-258ENST00000639370 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
KCNMA1-258ENST00000639370 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
KCNMA1-258ENST00000639370 USP19O94966 1318 aa13□□□□□ -0.33
KCNMA1-258ENST00000639370 MTHFSP49914 203 aa13□□□□□ -0.33
KCNMA1-258ENST00000639370 CLASP1Q7Z460 1538 aa13□□□□□ -0.33
KCNMA1-258ENST00000639370 WDR63Q8IWG1 891 aa12.99□□□□□ -0.33
KCNMA1-258ENST00000639370 POLR3AO14802 1390 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-258ENST00000639370 FAM43AQ8N2R8 423 aa12.99□□□□□ -0.33
KCNMA1-258ENST00000639370 TNNQ9UQP3 1299 aa12.99□□□□□ -0.33
KCNMA1-258ENST00000639370 MADDQ8WXG6 1647 aa12.98□□□□□ -0.33
KCNMA1-258ENST00000639370 RLBP1P12271 317 aa12.98□□□□□ -0.33
KCNMA1-258ENST00000639370 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
KCNMA1-258ENST00000639370 MFAP1P55081 439 aaKnown RBP12.98□□□□□ -0.33
KCNMA1-258ENST00000639370 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
KCNMA1-258ENST00000639370 NSD3Q9BZ95 1437 aa12.98□□□□□ -0.33
KCNMA1-258ENST00000639370 GZF1Q9H116 711 aaPredicted RBP12.98□□□□□ -0.33
KCNMA1-258ENST00000639370 TBC1D32Q96NH3 1257 aa12.97□□□□□ -0.33
KCNMA1-258ENST00000639370 TBC1D2Q9BYX2 928 aa12.97□□□□□ -0.33
KCNMA1-258ENST00000639370 U2SURPO15042 1029 aaKnown RBP12.96□□□□□ -0.33
KCNMA1-258ENST00000639370 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms