RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
SCARB2-211ENST00000638603 COG6Q9Y2V7 657 aa10.57□□□□□ -0.72
SCARB2-211ENST00000638603 TRPM1Q7Z4N2 1603 aa10.56□□□□□ -0.72
SCARB2-211ENST00000638603 CENPJQ9HC77 1338 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-211ENST00000638603 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-211ENST00000638603 PANK1Q8TE04 598 aa10.55□□□□□ -0.72
SCARB2-211ENST00000638603 TRAK1Q9UPV9 953 aa10.55□□□□□ -0.72
SCARB2-211ENST00000638603 MAGI2Q86UL8 1455 aa10.55□□□□□ -0.72
SCARB2-211ENST00000638603 BCL2L13Q9BXK5 485 aa10.55□□□□□ -0.72
SCARB2-211ENST00000638603 GSE1Q14687 1217 aa10.54□□□□□ -0.72
SCARB2-211ENST00000638603 ZMYM4Q5VZL5 1548 aa10.54□□□□□ -0.72
SCARB2-211ENST00000638603 KDM2BQ8NHM5 1336 aa10.54□□□□□ -0.72
SCARB2-211ENST00000638603 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
SCARB2-211ENST00000638603 DUOX2Q9NRD8 1548 aa10.54□□□□□ -0.72
SCARB2-211ENST00000638603 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
SCARB2-211ENST00000638603 CLUAP1Q96AJ1 413 aa10.54□□□□□ -0.72
SCARB2-211ENST00000638603 PRDM15P57071 1507 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-211ENST00000638603 SCAF11Q99590 1463 aaKnown RBP10.53□□□□□ -0.72
SCARB2-211ENST00000638603 STAC3Q96MF2 364 aa10.53□□□□□ -0.72
SCARB2-211ENST00000638603 UPF2Q9HAU5 1272 aaKnown RBP10.53□□□□□ -0.72
SCARB2-211ENST00000638603 EIF2AK4Q9P2K8 1649 aaKnown RBP10.53□□□□□ -0.72
SCARB2-211ENST00000638603 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCARB2-211ENST00000638603 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.72
SCARB2-211ENST00000638603 PREX2Q70Z35 1606 aa10.52□□□□□ -0.72
SCARB2-211ENST00000638603 C8orf34Q49A92 452 aa10.52□□□□□ -0.73
SCARB2-211ENST00000638603 TTC37Q6PGP7 1564 aa10.52□□□□□ -0.73
SCARB2-211ENST00000638603 INSRP06213 1382 aa10.52□□□□□ -0.73
SCARB2-211ENST00000638603 NUTM2DQ5VT03 806 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-211ENST00000638603 ADGRF5Q8IZF2 1346 aa10.52□□□□□ -0.73
SCARB2-211ENST00000638603 GGT6Q6P531 493 aa10.52□□□□□ -0.73
SCARB2-211ENST00000638603 SLKQ9H2G2 1235 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-211ENST00000638603 WDR7Q9Y4E6 1490 aa10.52□□□□□ -0.73
SCARB2-211ENST00000638603 E9PCH4 1651 aa10.52□□□□□ -0.73
SCARB2-211ENST00000638603 CGNL1Q0VF96 1302 aa10.52□□□□□ -0.73
SCARB2-211ENST00000638603 PLCH2O75038 1416 aa10.51□□□□□ -0.73
SCARB2-211ENST00000638603 SAFB2Q14151 953 aaKnown RBP eCLIP10.51□□□□□ -0.73
SCARB2-211ENST00000638603 CFAP53Q96M91 514 aa10.51□□□□□ -0.73
SCARB2-211ENST00000638603 DMRT2Q9Y5R5 561 aa10.51□□□□□ -0.73
SCARB2-211ENST00000638603 BECN1Q14457 450 aa10.51□□□□□ -0.73
SCARB2-211ENST00000638603 IGHDP01880 384 aa10.51□□□□□ -0.73
SCARB2-211ENST00000638603 SLC12A5Q9H2X9 1139 aa10.51□□□□□ -0.73
SCARB2-211ENST00000638603 ASXL1Q8IXJ9 1541 aa10.51□□□□□ -0.73
SCARB2-211ENST00000638603 FRAT2O75474 233 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-211ENST00000638603 TMEM132EQ6IEE7 984 aa10.5□□□□□ -0.73
SCARB2-211ENST00000638603 ARXQ96QS3 562 aa10.5□□□□□ -0.73
SCARB2-211ENST00000638603 CARD14Q9BXL6 1004 aa10.5□□□□□ -0.73
SCARB2-211ENST00000638603 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
SCARB2-211ENST00000638603 BRPF3Q9ULD4 1205 aa10.5□□□□□ -0.73
SCARB2-211ENST00000638603 ZNF521Q96K83 1311 aa10.5□□□□□ -0.73
SCARB2-211ENST00000638603 NKTRP30414 1462 aaKnown RBP10.5□□□□□ -0.73
SCARB2-211ENST00000638603 U2AF1L5P0DN76 240 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-211ENST00000638603 U2AF1Q01081 240 aaKnown RBP eCLIP10.5□□□□□ -0.73
SCARB2-211ENST00000638603 SCAPERQ9BY12 1400 aa10.49□□□□□ -0.73
SCARB2-211ENST00000638603 FTSJ3Q8IY81 847 aaKnown RBP10.49□□□□□ -0.73
SCARB2-211ENST00000638603 TCP11L2Q8N4U5 519 aa10.49□□□□□ -0.73
SCARB2-211ENST00000638603 MAST1Q9Y2H9 1570 aa10.49□□□□□ -0.73
SCARB2-211ENST00000638603 U2SURPO15042 1029 aaKnown RBP10.48□□□□□ -0.73
SCARB2-211ENST00000638603 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
SCARB2-211ENST00000638603 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
SCARB2-211ENST00000638603 PIK3C2GO75747 1445 aa10.48□□□□□ -0.73
SCARB2-211ENST00000638603 UNC13BO14795 1591 aa10.48□□□□□ -0.73
SCARB2-211ENST00000638603 MTHFSP49914 203 aa10.47□□□□□ -0.73
SCARB2-211ENST00000638603 RUNDC1Q96C34 613 aa10.47□□□□□ -0.73
SCARB2-211ENST00000638603 MAPK8IP3Q9UPT6 1336 aa10.47□□□□□ -0.73
SCARB2-211ENST00000638603 NGEFQ8N5V2 710 aa10.47□□□□□ -0.73
SCARB2-211ENST00000638603 PMFBP1Q8TBY8 1022 aa10.47□□□□□ -0.73
SCARB2-211ENST00000638603 IQGAP3Q86VI3 1631 aa10.46□□□□□ -0.73
SCARB2-211ENST00000638603 ATP10AO60312 1499 aa10.46□□□□□ -0.74
SCARB2-211ENST00000638603 ABCC2Q92887 1545 aa10.46□□□□□ -0.74
SCARB2-211ENST00000638603 ANO8Q9HCE9 1232 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-211ENST00000638603 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-211ENST00000638603 STK26Q9P289 416 aa10.45□□□□□ -0.74
SCARB2-211ENST00000638603 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
SCARB2-211ENST00000638603 TRMT2AQ8IZ69 625 aaKnown RBP10.45□□□□□ -0.74
SCARB2-211ENST00000638603 NSD3Q9BZ95 1437 aa10.44□□□□□ -0.74
SCARB2-211ENST00000638603 RWDD1Q9H446 243 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-211ENST00000638603 MYH16Q9H6N6 1097 aa10.44□□□□□ -0.74
SCARB2-211ENST00000638603 EIF5BO60841 1220 aaKnown RBP10.44□□□□□ -0.74
SCARB2-211ENST00000638603 TNNQ9UQP3 1299 aa10.44□□□□□ -0.74
SCARB2-211ENST00000638603 ERCC6L2Q5T890 1561 aa10.44□□□□□ -0.74
SCARB2-211ENST00000638603 MYO5CQ9NQX4 1742 aa10.44□□□□□ -0.74
SCARB2-211ENST00000638603 SEC24BO95487 1268 aa10.44□□□□□ -0.74
SCARB2-211ENST00000638603 RARSP54136 660 aaKnown RBP10.44□□□□□ -0.74
SCARB2-211ENST00000638603 SRPK2P78362 688 aaKnown RBP10.43□□□□□ -0.74
SCARB2-211ENST00000638603 NPC1L1Q9UHC9 1359 aa10.43□□□□□ -0.74
SCARB2-211ENST00000638603 PLXNC1O60486 1568 aa10.43□□□□□ -0.74
SCARB2-211ENST00000638603 SMC4Q9NTJ3 1288 aa10.43□□□□□ -0.74
SCARB2-211ENST00000638603 PDZRN3Q9UPQ7 1066 aa10.43□□□□□ -0.74
SCARB2-211ENST00000638603 LAMC1P11047 1609 aa10.42□□□□□ -0.74
SCARB2-211ENST00000638603 ITPRIPQ8IWB1 547 aa10.42□□□□□ -0.74
SCARB2-211ENST00000638603 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
SCARB2-211ENST00000638603 PCDHB15Q9Y5E8 787 aa10.41□□□□□ -0.74
SCARB2-211ENST00000638603 RLBP1P12271 317 aa10.41□□□□□ -0.74
SCARB2-211ENST00000638603 TSR2Q969E8 191 aaKnown RBP10.41□□□□□ -0.74
SCARB2-211ENST00000638603 MFAP1P55081 439 aaKnown RBP10.41□□□□□ -0.74
SCARB2-211ENST00000638603 ZKSCAN2Q63HK3 967 aa10.41□□□□□ -0.74
SCARB2-211ENST00000638603 SYNMO15061 1565 aa10.41□□□□□ -0.74
SCARB2-211ENST00000638603 NOS1P29475 1434 aa10.4□□□□□ -0.74
SCARB2-211ENST00000638603 FANCAO15360 1455 aa10.4□□□□□ -0.74
SCARB2-211ENST00000638603 MADDQ8WXG6 1647 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms