RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 COG3Q96JB2 828 aa8.61□□□□□ -1.03
SCARB2-207ENST00000638295 TMX4Q9H1E5 349 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-207ENST00000638295 HDAC5Q9UQL6 1122 aa8.61□□□□□ -1.03
SCARB2-207ENST00000638295 KTN1Q86UP2 1357 aaKnown RBP8.61□□□□□ -1.03
SCARB2-207ENST00000638295 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
SCARB2-207ENST00000638295 PDE3BQ13370 1112 aa8.61□□□□□ -1.03
SCARB2-207ENST00000638295 FTSJ3Q8IY81 847 aaKnown RBP8.61□□□□□ -1.03
SCARB2-207ENST00000638295 CENPJQ9HC77 1338 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-207ENST00000638295 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
SCARB2-207ENST00000638295 LAS1LQ9Y4W2 734 aaKnown RBP8.61□□□□□ -1.03
SCARB2-207ENST00000638295 NLRP6P59044 892 aa8.6□□□□□ -1.03
SCARB2-207ENST00000638295 CC2D1BQ5T0F9 858 aaKnown RBP8.6□□□□□ -1.03
SCARB2-207ENST00000638295 NLRP13Q86W25 1043 aa8.6□□□□□ -1.03
SCARB2-207ENST00000638295 C19orf44Q9H6X5 657 aa8.6□□□□□ -1.03
SCARB2-207ENST00000638295 STRN4Q9NRL3 753 aa8.6□□□□□ -1.03
SCARB2-207ENST00000638295 ABCA8O94911 1581 aa8.6□□□□□ -1.03
SCARB2-207ENST00000638295 ERBINQ96RT1 1412 aa8.6□□□□□ -1.03
SCARB2-207ENST00000638295 ABTB2Q8N961 1025 aa8.6□□□□□ -1.03
SCARB2-207ENST00000638295 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
SCARB2-207ENST00000638295 RALBP1Q15311 655 aa8.59□□□□□ -1.03
SCARB2-207ENST00000638295 PRAM1Q96QH2 718 aa8.59□□□□□ -1.03
SCARB2-207ENST00000638295 ROCK1Q13464 1354 aa8.59□□□□□ -1.03
SCARB2-207ENST00000638295 YEATS2Q9ULM3 1422 aa8.59□□□□□ -1.03
SCARB2-207ENST00000638295 LMOD3Q0VAK6 560 aa8.59□□□□□ -1.03
SCARB2-207ENST00000638295 PMFBP1Q8TBY8 1022 aa8.59□□□□□ -1.03
SCARB2-207ENST00000638295 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
SCARB2-207ENST00000638295 USP35Q9P2H5 1018 aa8.59□□□□□ -1.03
SCARB2-207ENST00000638295 ZCCHC11Q5TAX3 1644 aaKnown RBP8.59□□□□□ -1.03
SCARB2-207ENST00000638295 NEUROD2Q15784 382 aa8.59□□□□□ -1.04
SCARB2-207ENST00000638295 RBM33Q96EV2 1170 aaKnown RBP8.59□□□□□ -1.04
SCARB2-207ENST00000638295 LRRC59Q96AG4 307 aaKnown RBP8.58□□□□□ -1.04
SCARB2-207ENST00000638295 NLRP2Q9NX02 1062 aa8.58□□□□□ -1.04
SCARB2-207ENST00000638295 KCNA6P17658 529 aa8.58□□□□□ -1.04
SCARB2-207ENST00000638295 CFAP70Q5T0N1 1121 aa8.58□□□□□ -1.04
SCARB2-207ENST00000638295 ITSN2Q9NZM3 1697 aa8.57□□□□□ -1.04
SCARB2-207ENST00000638295 HSPA5P11021 654 aaKnown RBP8.57□□□□□ -1.04
SCARB2-207ENST00000638295 GOLGA2Q08379 1002 aa8.57□□□□□ -1.04
SCARB2-207ENST00000638295 ABCC5O15440 1437 aa8.57□□□□□ -1.04
SCARB2-207ENST00000638295 SYTL4Q96C24 671 aaPredicted RBP8.57□□□□□ -1.04
SCARB2-207ENST00000638295 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
SCARB2-207ENST00000638295 RAPGEF4Q8WZA2 1011 aa8.57□□□□□ -1.04
SCARB2-207ENST00000638295 DUOX2Q9NRD8 1548 aa8.57□□□□□ -1.04
SCARB2-207ENST00000638295 NPHP3Q7Z494 1330 aa8.57□□□□□ -1.04
SCARB2-207ENST00000638295 MAP3K1Q13233 1512 aa8.56□□□□□ -1.04
SCARB2-207ENST00000638295 CASC1Q6TDU7 716 aa8.56□□□□□ -1.04
SCARB2-207ENST00000638295 TBX22Q9Y458 520 aa8.56□□□□□ -1.04
SCARB2-207ENST00000638295 FOXO3O43524 673 aa8.56□□□□□ -1.04
SCARB2-207ENST00000638295 PHF8Q9UPP1 1060 aa8.56□□□□□ -1.04
SCARB2-207ENST00000638295 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
SCARB2-207ENST00000638295 U2AF1L5P0DN76 240 aaPredicted RBP8.55□□□□□ -1.04
SCARB2-207ENST00000638295 U2AF1Q01081 240 aaKnown RBP eCLIP8.55□□□□□ -1.04
SCARB2-207ENST00000638295 XPCQ01831 940 aaPredicted RBP8.55□□□□□ -1.04
SCARB2-207ENST00000638295 NCOA1Q15788 1441 aa8.55□□□□□ -1.04
SCARB2-207ENST00000638295 ATP7AQ04656 1500 aa8.55□□□□□ -1.04
SCARB2-207ENST00000638295 C8orf37Q96NL8 207 aa8.55□□□□□ -1.04
SCARB2-207ENST00000638295 DISP3Q9P2K9 1392 aa8.55□□□□□ -1.04
SCARB2-207ENST00000638295 TOM1L2Q6ZVM7 507 aa8.55□□□□□ -1.04
SCARB2-207ENST00000638295 IPO8O15397 1037 aaKnown RBP8.54□□□□□ -1.04
SCARB2-207ENST00000638295 ZNF692Q9BU19 519 aaPredicted RBP8.54□□□□□ -1.04
SCARB2-207ENST00000638295 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
SCARB2-207ENST00000638295 OS9Q13438 667 aaPredicted RBP8.54□□□□□ -1.04
SCARB2-207ENST00000638295 ZNF330Q9Y3S2 320 aaPredicted RBP8.54□□□□□ -1.04
SCARB2-207ENST00000638295 FKBP8Q14318 412 aa8.53□□□□□ -1.04
SCARB2-207ENST00000638295 ADCY10Q96PN6 1610 aa8.53□□□□□ -1.04
SCARB2-207ENST00000638295 C1orf141Q5JVX7 400 aa8.53□□□□□ -1.04
SCARB2-207ENST00000638295 CGNL1Q0VF96 1302 aa8.53□□□□□ -1.04
SCARB2-207ENST00000638295 MLH3Q9UHC1 1453 aa8.53□□□□□ -1.04
SCARB2-207ENST00000638295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.53□□□□□ -1.046e-6■■■■■ 38.2
SCARB2-207ENST00000638295 KRT28Q7Z3Y7 464 aa8.53□□□□□ -1.04
SCARB2-207ENST00000638295 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
SCARB2-207ENST00000638295 SAMD9Q5K651 1589 aa8.52□□□□□ -1.04
SCARB2-207ENST00000638295 STK31Q9BXU1 1019 aa8.52□□□□□ -1.04
SCARB2-207ENST00000638295 CFAP44Q96MT7 982 aa8.52□□□□□ -1.05
SCARB2-207ENST00000638295 SLAIN2Q9P270 581 aa8.52□□□□□ -1.05
SCARB2-207ENST00000638295 PPP1R1BQ9UD71 204 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-207ENST00000638295 PTPN23Q9H3S7 1636 aa8.52□□□□□ -1.05
SCARB2-207ENST00000638295 CCDC61Q9Y6R9 512 aa8.52□□□□□ -1.05
SCARB2-207ENST00000638295 CCER2I3L3R5 266 aa8.51□□□□□ -1.05
SCARB2-207ENST00000638295 GTF2E1P29083 439 aaPredicted RBP8.51□□□□□ -1.05
SCARB2-207ENST00000638295 ARAP3Q8WWN8 1544 aa8.51□□□□□ -1.05
SCARB2-207ENST00000638295 CDK19Q9BWU1 502 aa8.51□□□□□ -1.05
SCARB2-207ENST00000638295 CFAP43Q8NDM7 1665 aa8.5□□□□□ -1.05
SCARB2-207ENST00000638295 MYO5CQ9NQX4 1742 aa8.5□□□□□ -1.05
SCARB2-207ENST00000638295 KCNH5Q8NCM2 988 aa8.5□□□□□ -1.05
SCARB2-207ENST00000638295 CABP2Q9NPB3 220 aa8.5□□□□□ -1.05
SCARB2-207ENST00000638295 NPHP4O75161 1426 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-207ENST00000638295 ZC3H6P61129 1189 aaKnown RBP8.5□□□□□ -1.05
SCARB2-207ENST00000638295 FBXO41Q8TF61 875 aa8.5□□□□□ -1.05
SCARB2-207ENST00000638295 ZNF772Q68DY9 489 aaPredicted RBP8.49□□□□□ -1.05
SCARB2-207ENST00000638295 ZNF335Q9H4Z2 1342 aaPredicted RBP8.49□□□□□ -1.05
SCARB2-207ENST00000638295 KDM4FA0A1W2PPD8 638 aa8.49□□□□□ -1.05
SCARB2-207ENST00000638295 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
SCARB2-207ENST00000638295 ANP32BQ92688 251 aaKnown RBP8.49□□□□□ -1.05
SCARB2-207ENST00000638295 NUDT16Q96DE0 195 aaKnown RBP8.49□□□□□ -1.05
SCARB2-207ENST00000638295 MIER1Q8N108 512 aa8.48□□□□□ -1.05
SCARB2-207ENST00000638295 WASHC2AQ641Q2 1341 aa8.48□□□□□ -1.05
SCARB2-207ENST00000638295 DIP2BQ9P265 1576 aa8.48□□□□□ -1.05
SCARB2-207ENST00000638295 SHROOM2Q13796 1616 aa8.48□□□□□ -1.05
SCARB2-207ENST00000638295 FRAT1Q92837 279 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-207ENST00000638295 GLI2P10070 1586 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms